Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689965.1_202016-07-20] 8,805 sequences; 43,736,635 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq248 206 3e-48 seq6491 122 9e-23 seq8196 107 2e-18 seq7298 107 2e-18 seq3785 102 8e-17 seq8729 89.7 5e-13 seq6382 89.7 5e-13 >seq248 Length=52618 Score = 206 bits (228), Expect = 3e-48 Identities = 942/1469 (64%), Gaps = 65/1469 (4%) Strand=Plus/Minus Query 153028 GGTTGACCACTTGAAACTCGCCCGCCAACACTCGTCTCAAATATACATTGCTAGTGAAAG 153087 ||||||| ||||| |||||||| || | ||| |||| || | ||||| ||| ||| Sbjct 28691 GGTTGACGACTTGGAACTCGCCGGCGAGCACACGTCGGGTGTAAAGGTTGCTCGTGTAAG 28632 Query 153088 GTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTCGGCATGTACGCCA 153147 | |||||| | ||||| ||| || || ||| || | ||||| ||||| || | Sbjct 28631 GCTCAAAGCACTCGTTGAAGCCGAGGATCTGACTTGTCGAAGCGGTGGGCATAGGGGCGA 28572 Query 153148 CCAACAAAGAATTCCGCAAGCCGTGCGCTCGAATGTCGTCCTTCAACGCCTGCCAATCCC 153207 || | || || || | ||||| || ||||| | ||| | | | ||| |||| Sbjct 28571 GCAGGAGGGAGTTTCGGAGACCGTGTGCGGCAATGTTGCGCTTGATCTCGGCCCAGTCCC 28512 Query 153208 ACAG--CGCCGACGGTGTCGCGTTCCACATGTCGTACTGTAACACTCCTCGACTGGCGGG 153265 | || ||| | |||| | | ||| | |||||| || | | | || |||| || Sbjct 28511 AGAGTCCGCTGGGGGTGACTCC--CCAGAGGTCGTATTGCAGCTCGCCCTTGCTGGTCGG 28454 Query 153266 ACTGCCGGCAAACGTACTGTAGCTGCCGT-CGCGTTGGGCCAGTTCGCAGCTAGC-CTCG 153323 ||||| | | || |||| | ||| | | |||| | || ||||| | | | |||| Sbjct 28453 GCTGCCCTCGTATGTCTCGTAGGTCCCGAGCTCCTTGG-CGAGCTCGCA-CGATCGCTCG 28396 Query 153324 AGCGCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGAACGGCCGCTTCTTCGCTC 153383 || ||| | | ||| || || ||| ||| || | ||||| || || ||| Sbjct 28395 AGAGCGGCGTGGTAGATCGTCTCGAAGATCTGGATGTTGAGCTTCTTGGCCTCGGGGCTG 28336 Query 153384 TCGTACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGACCCTGGATACCGACGCCGATG 153443 ||| ||| | || | || || |||||||| ||||| | || |||| |||||| Sbjct 28335 TCGAACGCGTAACCCATGATCATGAAAGCGTCGGCGAGACCGTTGACTCCGATACCGATG 28276 Query 153444 GGTCGATGCTTCTCGTTG-----CTGCGCCTCGCGCTCGCTATGGGATAGTGATTGCGAT 153498 || || || | |||| || ||||||| | | || |||| ||| || Sbjct 28275 GGGCGGTGGCGCATGTTGGACTTCTTCGCCTCGGGAACA-----GGGTAGTAGTTGACAT 28221 Query 153499 CGATAATTTTGTTGAGGTTGCGCACCACC-ACTTTAGTTATCGCCTTAAGTTTCTCGAAA 153557 |||| || ||||||||||||| ||| | | || || || | | | | || |||| ||| Sbjct 28220 CGATGATCTTGTTGAGGTTGC-CACAAACGACCTTGGTAACCTCGTGGAGCTTCTTGAAG 28162 Query 153558 TCATAGGTCATT----TCGT--------CGACGCGTACGCATCGATTCACGGCAATAGAC 153605 || || ||| || |||| ||| | | ||| | | | || ||| Sbjct 28161 TCGTATGTCCTTGTGTTCGTGTGCGAGTCGATGTGGACGTAAGAAGGTAGAGCCATACTG 28102 Query 153606 GCCAGATTACAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATCTCGGCGCAGAGG 153665 || || || ||||| || ||| || | ||||||||| || |||||| | ||| ||| Sbjct 28101 GCAAGGTTGCAGACAGCGACCTCATCCGGAGCGCTGTACTCCATGATCTCCGTGCACAGG 28042 Query 153666 TTGCTGCATTTTATGACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCACGCGTCTTTG 153725 ||| ||| || ||| ||| | || | || || ||||| ||| ||||| ||| Sbjct 28041 TTGGAGCACTTGATGGTGCCGAGGTTCTTTTGGTTCGACTTGCGGTTGGCAGCGTCCTTG 27982 Query 153726 AAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCGA---CGATAAACCTATGCAGG 153782 | |||||| | || ||| ||||| || | |||| || ||| | || Sbjct 27981 TAAAGCATGAAAGGGTTGCCAGTCTCCGTCTGAGCCTCGAGAACGGCGTACCAAAGC--- 27925 Query 153783 TCCTGCGCTCGCACCCGCTGCCGATAGCGGCCCTCGCTCTCGTATCGCTCGTACAGTCGC 153842 | || || || | ||| || ||||| | |||||| |||||| || | Sbjct 27924 TTTTGGGCCTTGACGGTTCGGCGAGCACGACCCTCACGCTCGTACTTCTCGTAGAGAGCC 27865 Query 153843 TCAAACTCGTCGCCGTAGCAGTCGGCGAGGCCGGGACACTGATGCGGACACATCAGCGAC 153902 || ||||||||||||||| || ||||| ||||| |||| | || |||||||||||| Sbjct 27864 TCGAACTCGTCGCCGTAGACATCAGCGAGACCGGGGCACTCAGCGGGGCACATCAGCGAC 27805 Query 153903 CACATATCGTCGGCGTTGACGCGTCGCATGAACAGATCCGGCACCCAGAGCGCGTACATG 153962 ||| ||| | ||| || |||||||| || || | ||| || ||||| | | Sbjct 27804 CACTCTCCGTTCTGTTCGACTCGCTTCATGAACAAGTCAGGGATCCAAAGGGCGTAGAAG 27745 Query 153963 AGGTCGCGCGCCTTGCAATCCTCCGCGCCCATGTTGCGTTTCAGATTGA-GCACGCTATA 154021 || || || || | |||||| ||| ||| | || | || | || | | | Sbjct 27744 AGCTCACGGGCTCGGACCTCCTCCTTGCCGTGGTTCTTCCTGAGGTCGAGGAACTCGA-A 27686 Query 154022 GATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGGGCACCTTTACGC---TTTCCGCC 154078 || ||| | ||||||||| |||||||||| ||| | ||||||| |||| || || || Sbjct 27685 GACGTCAGAGTGCCAGGGCTCAATGTAGATGGCGAAGGCACCTGGACGCTTGTTGCCACC 27626 Query 154079 CTGATCGACGTGGCGCACCATATTGTTGAAGACGCGCACCATGGGTTCCAGGCCGCTTGC 154138 ||||||||||| ||| | | |||||||||||||| | ||| || | | ||| | | Sbjct 27625 CTGATCGACGTAGCGAGCGGTGTTGTTGAAGACGCGAAGCATAGGCACGATACCGTTAGA 27566 Query 154139 GGTGCCGTTGGT--CG--AAT---TGATCTTGCTGCCGCGGGCGCGCACTTGATGCACGT 154191 | ||||| || || ||| ||| | | | || ||| ||| | ||| || Sbjct 27565 GACACCGTTAGTTCCGGCAATGTATGAGC-CGGTACCACGG--ATGCAGTGGAT----GT 27513 Query 154192 TAACGCCAATGCCGCC-GCCGTACTT--TGAT-ATGGCAGCGCAGTCGCCCAGCGTCCTG 154247 | | ||| ||||| || ||||| ||| |||| ||| |||||| || || | Sbjct 27512 TGAGGCCGATGCCACCAGCCGT-CTTGCTGATCATG---GCGCAGGTCTTGAGAGTGTCG 27457 Query 154248 TAGATGCCGTCGATGCTATCGTCGCGGACGCCGAGCAAGAAACACGAACACATTTGCGGA 154307 |||||||||||||| ||||| | | || || ||| ||||| ||||||| || Sbjct 27456 TAGATGCCGTCGATCGAGTCGTCCTTCATGGTGACCAGGAAGCACGATGACATTTGAGGG 27397 Query 154308 ATGCGCGTTCCCGCCGAAAAGAGGGTGGGACTCGCGTGCGTAAACAGTTTTTGGCTCATC 154367 || | || || || ||||||||||| || || || || || | ||| Sbjct 27396 TTGGGTGTACCAGCGTTGAAGAGGGTGGGGGAGGCATGGGTGAAGTACTTCTCCGACATG 27337 Query 154368 ATGCGGTACGTTTCGATGGCGTCTTCGATATCATCGCCGTGAATGCCGAGCGCGACGCGC 154427 | | ||| || |||||||| || ||||| | ||||| ||||||| || || ||| Sbjct 27336 AGGTTGTAAGTGTCGATGGCCTCGTCGATGGAACTCCCGTGGATGCCGACAGCAACTCGC 27277 Query 154428 ATGAGCATGTGCTGCGGACGTTCGGCGAC 154456 ||||||||||| || || || |||||||| Sbjct 27276 ATGAGCATGTGTTGGGGGCGCTCGGCGAC 27248 >seq6491 Length=17318 Score = 122 bits (134), Expect = 9e-23 Identities = 146/196 (74%), Gaps = 2/196 (1%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||||||||| | |||||| ||||||||| || || |||| Sbjct 4960 GACTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGGCCGTCCTCGAGCTGCTTGCCGGCG 5019 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || ||||| |||||||| || |||||||| ||||| || |||| || || | Sbjct 5020 AAGATGAGTCGCTGCTGGTCCGGGGGGATACCTTCCTTGTC-CTGGATTTTGGTCTTGAC 5078 Query 138541 TG-TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 | || | || ||||| ||||||||||||| || | || ||||| ||||| || || Sbjct 5079 GGCGTCGATGGAGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTACCCGTCAGGGTCTT 5138 Query 138600 TACAAAAATCTGCATG 138615 || || ||||||||| Sbjct 5139 GACGAAGATCTGCATG 5154 >seq8196 Length=29145 Score = 107 bits (118), Expect = 2e-18 Identities = 135/183 (74%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| | ||| || ||||||||| || || |||| Sbjct 8781 GACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGACCGTCCTCGAGCTGCTTGCCGGCG 8722 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| ||||||||||||||||| || |||||||| ||||| || | || || || | Sbjct 8721 AAGATGAGACGCTGTTGGTCCGGGGGAATACCTTCCTTGTC-CTGGATCTTGGTCTTGAC 8663 Query 138541 TG-TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 | || | || ||||| |||||| ||||||| || | ||| || || || || || || Sbjct 8662 GGCGTCGATGGAGTCGGACGACTCGACCTCGAGGGTGATCGTCTTGCCGGTGAGGGTCTT 8603 Query 138600 TAC 138602 || Sbjct 8602 GAC 8600 >seq7298 Length=1044 Score = 107 bits (118), Expect = 2e-18 Identities = 135/183 (74%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||| ||| | || || |||||||||||| || |||| Sbjct 367 GACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCGTCCTCGAGTTGCTTGCCGGCG 426 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGAT-TTTTTGTTTTAA 138539 |||| |||||||||||||||||||| || || || ||||| ||| || | || | Sbjct 427 AAGATGAGACGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCTTGGATCTTGGTCTTGACA 486 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 ||| || | |||||| | ||||| ||||||| || | || || ||||||||||| || Sbjct 487 TTG-TCGATGGTGTCCGAGGACTCAACCTCGAGGGTGATGGTCTTGCCAGTCAGAGTCTT 545 Query 138600 TAC 138602 || Sbjct 546 AAC 548 Score = 91.5 bits (100), Expect = 1e-13 Identities = 161/231 (70%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || |||| || | ||| ||||| | | |||||||| || ||||||||||| Sbjct 105 GCCACCACGCAGGCGGAGAACCAAATGCAATGTGGACTCCTTCTGGATGTTGTAGTCCGA 164 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | ||||| ||| || || || || |||| |||| | || |||||||||||||| Sbjct 165 GAGGGTACGTCCGTCTTCAAGCTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCCGGAGG 224 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCC 138564 || || || ||||| ||| | || || || | ||| || | ||||||| ||||| Sbjct 225 GATGCCCTCCTTGTC-CTGAATCTTGGTCTTGACGTTG-TCGATAGTGTCGGAGGACTCA 282 Query 138565 ACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 || |||| || | || || || || || || || || || ||||||||| Sbjct 283 ACTTCGAGTGTGATTGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATG 333 >seq3785 Length=5141 Score = 102 bits (112), Expect = 8e-17 Identities = 135/184 (73%), Gaps = 4/184 (2%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||||||||| || || || ||||||||| || || |||| | Sbjct 599 GACTCCTTCTGGATGTTGTAGTCCGACAATGTTCGGCCGTCCTCGAGCTGCTTGCCGGCA 658 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539 |||| || ||||| ||||||||||| || || || || || || | ||||| || | Sbjct 659 AAGATGAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTATC-TTGGATCTTTGTCTTGAC 717 Query 138540 -TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 ||| || | |||||| | ||||| ||||||| || | || || ||||||||||| | Sbjct 718 GTTG-TCAATGGTGTCCGAGGACTCAACCTCGAGGGTGATGGTCTTGCCAGTCAGAGTCT 776 Query 138599 TTAC 138602 | || Sbjct 777 TGAC 780 Score = 98.7 bits (108), Expect = 1e-15 Identities = 133/183 (73%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 ||||||||||| |||||||| ||| | || || |||||||||||| || |||| Sbjct 4709 GACTCCTTTTGGATGTTGTAATCGGAAAGGGTGCGGCCGTCCTCGAGTTGCTTGCCGGCG 4650 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539 |||| || ||||| ||||||||||| || || || ||||| ||| || || | | Sbjct 4649 AAGATGAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCTTGGATCTTGGTCTTGACA 4590 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 |||| | | |||||| | ||||| ||||| | || | || || ||||||||||| || Sbjct 4589 TTGT-CAATGGTGTCTGAAGACTCAACCTCAAGGGTGATGGTCTTGCCAGTCAGAGTCTT 4531 Query 138600 TAC 138602 || Sbjct 4530 AAC 4528 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| | ||| || || | | |||||||| || |||||||||||| Sbjct 4970 CCACCGCGGAGACGGAGAACCAAGTGAAGTGTGGACTCCTTCTGGATGTTGTAGTCGGAG 4911 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || ||||||||| || || |||| |||| || ||||| ||||||||||| Sbjct 4910 AGGGTTCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATAAGGCGCTGCTGGTCCGGAGGG 4851 Query 138508 ATACCTTCTTTGTCGGTGAT-TTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || || || ||||| ||| || | || |||| || | ||||| | || || || Sbjct 4850 ATGCCCTCCTTGTCTTGGATCTTGGTCTTGACATTG-TCGATCGTGTCTGATGATTCAAC 4792 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| || | || || || || || || || || || |||||||| Sbjct 4791 TTCGAGTGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 4744 >seq8729 Length=33442 Score = 89.7 bits (98), Expect = 5e-13 Identities = 160/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 ||||| || | ||| | || | || | | | || || ||||| |||||||||||| Sbjct 30280 CCGCCACGGAGACGGAGGACGAGGTGGAGGGTGGATTCTTTTTGGATGTTGTAGTCGGAT 30221 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || ||| ||||| || || |||| |||| ||||| |||||||| || || Sbjct 30220 AGCGTTCGGCCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGTTGGTCTGGGGGG 30161 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565 || || || ||||| || | || || || | ||| || | ||||||| ||||| | Sbjct 30160 ATGCCCTCCTTGTC-TTGGATCTTGGTCTTGACGTTG-TCAATCGTGTCGGAGGACTCTA 30103 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 |||||| || | || || ||||| || || || || || ||||||||| Sbjct 30102 CCTCGAGGGTGATGGTCTTGCCAGTAAGGGTCTTGACGAAGATCTGCATG 30053 >seq6382 Length=53231 Score = 89.7 bits (98), Expect = 5e-13 Identities = 160/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || || | ||| | || ||||| | | ||||||||||||||||||||||| Sbjct 363 GCCACCACGGAGACGGAGGACCAAATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCCGA 304 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | || || || ||||| || || || | |||| | ||||| |||||||| || Sbjct 303 AAGGGTGCGGCCATCTTCGAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCCGGGGG 244 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTT--AATTGTTCCACGGTGTCGGTCGACTCC 138564 || || || ||||| ||| | || || || |||| || | |||||| | || ||| Sbjct 243 GATGCCCTCCTTGTC-CTGAATCTTCGTCTTGACATTG-TCGATGGTGTCTGATGATTCC 186 Query 138565 ACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||||| || | || || || || || || || || ||||||||||| Sbjct 185 ACCTCGAGTGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAAATCTGCAT 136 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496207780119600