Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689965.1_202016-07-20] 8,805 sequences; 43,736,635 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq2372 102 7e-17 seq7298 93.3 4e-14 seq6382 86.0 6e-12 seq3785 84.2 2e-11 >seq2372 Length=9363 Score = 102 bits (112), Expect = 7e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 || |||||||| | | || | ||| || || || || |||||||| || || || Sbjct 227 CCACCGCGGAGACGGAGGACCAAATGAAGTGTGGACTCTTTTTGGATGTTGTAGTCAGAA 168 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | ||| ||| ||||| || || || ||| | |||||||| || || ||||| ||| Sbjct 167 AGGGTGCGGCCATCCTCCAACTGCTTGCCCGCGAAGATCAATCGCTGTTGATCCGGAGGA 108 Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGAC 45292 || || || || |||||||| || |||| || | || | ||||| || |||||||| Sbjct 107 ATACCCTCCTTGTCTTGAATCTTGGTCTTGA-CGTTGTCGATAGTGTCTGAGGACTCGAC 49 Query 45293 TTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 |||||| || | || |||||||| || || || || || || ||||| Sbjct 48 TTCGAGTGTGATTGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 1 >seq7298 Length=1044 Score = 93.3 bits (102), Expect = 4e-14 Identities = 145/205 (71%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 45137 ATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTG 45196 ||||| || || ||||| ||||| || || || || ||| || || | || Sbjct 129 ATGCAATGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTACGTCCGTCTTCAAGCTG 188 Query 45197 TTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTT 45256 || || ||| | ||||||||||| |||||||| || ||||| || || || ||||| || Sbjct 189 CTTGCCGGCGAAGATCAATCGTTGTTGGTCCGGAGGGATGCCCTCCTTGTCCTGAATCTT 248 Query 45257 TTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGG 45315 |||| || | || | |||||||| ||||| |||||||| || | || ||||||| Sbjct 249 GGTCTTGA-CGTTGTCGATAGTGTCGGAGGACTCAACTTCGAGTGTGATTGTCTTGCCGG 307 Query 45316 TTAGAGTTTTTACAAAAATTTGCAT 45340 | || || || || || || ||||| Sbjct 308 TGAGGGTCTTGACGAAGATCTGCAT 332 >seq6382 Length=53231 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 || || ||||| | | || | ||| || || || |||||||| || || || || Sbjct 362 CCACCACGGAGACGGAGGACCAAATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCCGAA 303 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | ||| ||| || | || || || ||| | |||||||| ||||||||||| || Sbjct 302 AGGGTGCGGCCATCTTCGAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCCGGGGGG 243 Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACT 45293 ||||| || || || ||||| || |||| || | |||||| || || || || Sbjct 242 ATGCCCTCCTTGTCCTGAATCTTCGTCTTGACATTGTCGATGGTGTCTGATGATTCCACC 183 Query 45294 TCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| || | || |||||||| || || || || ||||| ||||| Sbjct 182 TCGAGTGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAAATCTGCAT 136 >seq3785 Length=5141 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197 ||||| || || ||||||||||| || |||||| | ||| || || | ||| Sbjct 4718 TGCAGTGTGGACTCCTTTTGGATGTTGTAATCGGAAAGGGTGCGGCCGTCCTCGAGTTGC 4659 Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257 || || ||| | || | || ||||||||||| |||||||| || || ||||| || || Sbjct 4658 TTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCTTGGATCTTG 4599 Query 45258 TGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTT 45317 |||| || | |||||| |||||||| || || || || | || ||||| || Sbjct 4598 GTCTTGACATTGTCAATGGTGTCTGAAGACTCAACCTCAAGGGTGATGGTCTTGCCAGTC 4539 Query 45318 AGAGTTTTTAC 45328 ||||| || || Sbjct 4538 AGAGTCTTAAC 4528 Score = 82.4 bits (90), Expect = 7e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || |||||||| | | || | || || || || ||||| ||||| || || ||| Sbjct 4973 ATACCACCGCGGAGACGGAGAACCAAGTGAAGTGTGGACTCCTTCTGGATGTTGTAGTCG 4914 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || |||| || || | || ||||| ||| | || | || ||||||||||| Sbjct 4913 GAGAGGGTTCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATAAGGCGCTGCTGGTCCGGA 4854 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 || ||||| || || ||||| || || |||| || | ||||| || || || Sbjct 4853 GGGATGCCCTCCTTGTCTTGGATCTTGGTCTTGACATTGTCGATCGTGTCTGATGATTCA 4794 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 |||||||| || | || |||||||| || || || || || || ||||| Sbjct 4793 ACTTCGAGTGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 4744 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451953451397800