Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689965.1_202016-07-20] 8,805 sequences; 43,736,635 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq248 170 2e-37 seq4834 127 3e-24 >seq248 Length=52618 Score = 170 bits (188), Expect = 2e-37 Identities = 497/757 (66%), Gaps = 19/757 (3%) Strand=Plus/Minus Query 116440 GCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAA 116499 || || || || |||| | ||||||| | | ||||||| || || ||||| |||| Sbjct 28101 GCAAGGTTGCAGACAGCGACCTCATCCGGAGCGCTGTACTCCATGATCTCCGTGCACAGG 28042 Query 116500 TTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTG 116559 || || | ||| |||||||| | ||||||||| || ||||| ||| || |||||| Sbjct 28041 TTGGAGCACTTGATGGTGCCGAGGTTCTTTTGGTTCGACTTGCGGTTGGCAGCGTCCTTG 27982 Query 116560 TAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA-CATC 116618 || ||||| | || | || |||||||| || | || ||||| || | ||| | | | Sbjct 27981 TAAAGCATGAAAGGGTTGCCAGTCTCCGTCTGAGCCTCGAGAACGGCGTACCAAAGCTTT 27922 Query 116619 GGCGGCTGGCACAGT--GGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCC 116676 | | || | || || |||| || || ||||| ||||||||| |||||| ||| Sbjct 27921 TGGGCCTTG-ACGGTTCGGCGA--GCACGACCCTCACGCTCGTACTTCTCGTAGAGAGCC 27865 Query 116677 TCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGAC 116736 || ||||| || || | || | ||| || || || | | || || | || ||| Sbjct 27864 TCGAACTCGTCGCCGTAGACATCAGCGAGACCGGGGCACTCAGCGGGGCACATCAGCGAC 27805 Query 116737 CATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAG 116796 || | || || || || ||||||||||| | ||| |||||||| || || ||||| Sbjct 27804 CACTCTCCGTTCTGTTCGACTCGCTTCATGAACAAGTCAGGGATCCAAAGGGCGTAGAAG 27745 Query 116797 AGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATG 116856 || || || || | || || | || || || | | || | || || | | Sbjct 27744 AGCTCACGGGCTCGGACCTCCTCCTTGCCGTGGTTCTTCCTGAGGTCGAGGAACTCGAAG 27685 Query 116857 ATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCGACG------ACCA 116910 | || | |||||| || || | ||| | |||| | | ||| |||| ||| Sbjct 27684 ACGTCAGAGTGCCAGGGCTCAATGTAGATGGCGA-AGGCACCT--GGACGCTTGTTGCCA 27628 Query 116911 GCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCATCA 116970 |||| | || || | || || ||| || ||||||||||| || | |||||| | | Sbjct 27627 CCCTGATCGACGTAGCGAGCGGTGTTGTTGAAGACGCGAAGCATAGGCACGATACCGTTA 27568 Query 116971 GATTGGCCATTTGTCCCCCGAA--TACGAGACTTGTTGGCTCTGACATCGTGGATGTGCA 117028 || || || || || || || ||| | | | | | || |||||||| | Sbjct 27567 GAGACACCGTTAGTTCCGGCAATGTATGAGCC--GGTACCACGGATGCAGTGGATGTTGA 27510 Query 117029 TACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCC 117088 || || || || ||| ||| ||| ||||| | ||||| || ||||||| | Sbjct 27509 GGCCGATGCCACCAGCCGTCTTGCTGATCATGGCGCAGGTCTTGAGAGTGTCGTAGATGC 27450 Query 117089 CATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGGTG 117148 | ||||||||||| |||| | | || |||||||| |||||||| || | |||| Sbjct 27449 CGTCGATCGAGTCGTCCTTCATGGTGACCAGGAAGCACGATGACATTTGAGGGTTGGGTG 27390 Query 117149 TACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAA 117185 ||||||||||||||||||| || | || ||| |||| Sbjct 27389 TACCAGCGTTGAAGAGGGTGGGGGAGGCATGGGTGAA 27353 >seq4834 Length=10274 Score = 127 bits (140), Expect = 3e-24 Identities = 176/244 (72%), Gaps = 2/244 (1%) Strand=Plus/Minus Query 127519 AGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 127578 |||||| || ||| ||||||||||| ||| |||||| || || |||||| ||||| Sbjct 9296 AGCAAAGTCGGTGTGCAGACCCTCGTCTCGGCTGATGAGCTCGTTGGAGAAGGTGAGACC 9237 Query 127579 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 127638 ||||||||||| |||||||| | |||||| || | || ||||| ||||||||||| Sbjct 9236 GGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAAGAGCCGGAGAAGAAGAT 9177 Query 127639 CCCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGT-ATCAA 127697 ||||| || || || |||| || ||||||||||||| | | | ||| || | | Sbjct 9176 ACCCTCTACGGCAGCAAAGGCAACCAGGCGCTCGGCAAAGGTG-GAGTCTTCGTCGTTGA 9118 Query 127698 ACCACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAA 127757 ||| || ||||||| ||||||| || || || | ||||| ||||| || | Sbjct 9117 TCCAGCGCAGGGCCCACTCGGCCTTTTGCTTGACGACGGGAATGGTCTCCATCGCGTCGA 9058 Query 127758 AGAG 127761 |||| Sbjct 9057 AGAG 9054 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613439675863800