Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689965.1_202016-07-20] 8,805 sequences; 43,736,635 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq248 187 3e-42 seq4834 127 3e-24 >seq248 Length=52618 Score = 187 bits (206), Expect = 3e-42 Identities = 477/717 (67%), Gaps = 17/717 (2%) Strand=Plus/Plus Query 111705 TTCATCCACGCAACACCAACCCTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGT 111764 |||| ||| || | || ||||||||||||||||||||||| | || |||||||| Sbjct 27353 TTCACCCATGCCTCCCCCACCCTCTTCAACGCTGGTACACCCAACCCTCAAATGTCATCG 27412 Query 111765 TGTTTCCTTATTGCAAACAAGGAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAA 111824 || ||||| | | | ||||| || || ||| | ||||| |||| |||||||| Sbjct 27413 TGCTTCCTGGTCACCATGAAGGACGACTCGATCGACGGCATCTACGACACTCTCAAGACC 27472 Query 111825 TGTGCCCAAATCTCAAAGTGGGCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCC 111884 || ||| ||| ||| ||||||||| ||||| | ||||||| || | | Sbjct 27473 TGCGCCATGATCAGCAAGACGGCTGGTGGCATCGGCCTCAACATCCACTGCATCCGTGGT 27532 Query 111885 AACAAGTCTCGTA--TTAGAGGTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTC 111942 | | | ||| || || || || || ||| || | ||||| | || ||||||| Sbjct 27533 ACC--GGCTCATACATTGCCGGAACTAACGGTGTCTCTAACGGTATCGTGCCTATGCTTC 27590 Query 111943 GCGTATTTAACGCCACAGCGCGCTATGTAAACCAAGCTGG------GCGTCGCAAGGGAT 111996 |||| || ||| ||| || ||||| || | || | ||| ||||| || || Sbjct 27591 GCGTCTTCAACAACACCGCTCGCTACGTCGATCAGGGTGGCAACAAGCGTC-CA--GGTG 27647 Query 111997 CTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTC 112056 | |||| |||| ||||||| |||||| | || || | |||||||| || | | Sbjct 27648 CCTTCGCCATCTACATTGAGCCCTGGCACTCTGACGTCTTCGAGTTCCTCGACCTCAGGA 27707 Query 112057 TCAACCAAGGTGATGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAG 112116 ||||| || | ||||||| || ||| || ||||||| ||| || ||||| || | Sbjct 27708 AGAACCACGGCAAGGAGGAGGTCCGAGCCCGTGAGCTCTTCTACGCCCTTTGGATCCCTG 27767 Query 112117 ATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGG 112176 | | ||||||||| |||| || ||| || | ||||| || | || || | || Sbjct 27768 ACTTGTTCATGAAGCGAGTCGAACAGAACGGAGAGTGGTCGCTGATGTGCCCCGCTGAGT 27827 Query 112177 CACCCGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGG 112236 ||||||||| | |||| | || || ||||| || || |||||| ||||||||| Sbjct 27828 GCCCCGGTCTCGCTGATGTCTACGGCGACGAGTTCGAGGCTCTCTACGAGAAGTACGAGC 27887 Query 112237 AAGAAAGTCGGGCGACTGCG-ACGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAA 112294 || |||| || | || || || | || | | | | ||| | || ||||| | Sbjct 27888 GTGAGGGTCGTGC-TCGCCGAACCGT-CAAGGCCCAAAAGCTTTGGTACGCCGTTCTCGA 27945 Query 112295 GTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAG 112354 | |||| || |||||||| | || | ||||||||||| ||||| |||| ||| Sbjct 27946 GGCTCAGACGGAGACTGGCAACCCTTTCATGCTTTACAAGGACGCTGCCAACCGCAAGTC 28005 Query 112355 TAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGA 112411 || |||||||| | || |||||| | |||||||| || || || ||| |||| Sbjct 28006 GAACCAAAAGAACCTCGGCACCATCAAGTGCTCCAACCTGTGCACGGAGATCATGGA 28062 >seq4834 Length=10274 Score = 127 bits (140), Expect = 3e-24 Identities = 124/160 (78%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 102172 CCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCT 102231 ||||||| ||||| || | || ||||| || ||||||||||||||||| || || | Sbjct 9136 CCTTTGCCGAGCGCCTGGTTGCCTTTGCTGCCGTAGAGGGTATCTTCTTCTCCGGCTCTT 9195 Query 102232 TCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACG 102291 || | | || | |||||||||||||| ||||||||||| |||||| ||||||||||| Sbjct 9196 TCGCCTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTCACCTTCTCCAACG 9255 Query 102292 AGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331 |||| ||| || |||||||| || ||| || ||||| Sbjct 9256 AGCTCATCAGCCGAGACGAGGGTCTGCACACCGACTTTGC 9295 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620674079539600