Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689965.1_202016-07-20] 8,805 sequences; 43,736,635 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq248 167 3e-36 >seq248 Length=52618 Score = 167 bits (184), Expect = 3e-36 Identities = 559/864 (65%), Gaps = 17/864 (2%) Strand=Plus/Minus Query 110281 GGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAA 110340 || ||||| ||| ||||| ||||| |||| ||| || || |||| |||| Sbjct 28116 GGTAGAGCCATACTGGCAAGGTTGCAGACAGCGACCTCATCCGGAGCGCTGTACTCCATG 28057 Query 110341 ATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAG 110400 || ||||| |||| |||||| | ||| ||| || | |||||| || ||||| ||| | Sbjct 28056 ATCTCCGTGCACAGGTTGGAGCACTTGATGGTGCCGAGGTTCTTTTGGTTCGACTTGCGG 27997 Query 110401 TTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATG 110460 ||| || ||||| || |||||| | ||| | ||||| |||||||| | || ||||| | Sbjct 27996 TTGGCAGCGTCCTTGTAAAGCATGAAAGGGTTGCCAGTCTCCGTCTGAGCCTCGAGAACG 27937 Query 110461 GCCTTCCATACATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCCTCCTCGTACTTG 110520 || | ||| | | ||| ||| ||| | ||| |||| || ||||||||| Sbjct 27936 GCGTACCAAAGCTTTTGGGCCTTGACGGTTCGGCGAGCACGACCCTCACGCTCGTACTTC 27877 Query 110521 GTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGGA 110580 ||| | |||| || || | ||||| ||||||| ||||| || |||| Sbjct 27876 TCGTAGAGAGCCTCGAACTCGTCGCCGTAGACATCAGCGAGACCGGGGCACTCAGCGGGG 27817 Query 110581 CAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCAC 110640 || | || ||||| | ||| || || || | ||||||||||| |||||| ||||| Sbjct 27816 CACATCAGCGACCACTCTCCGTTCTGTTCGACTCGCTTCATGAACAAGTCAGGGATCCAA 27757 Query 110641 ATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCC 110700 | || |||| || |||||| || |||| || | || ||||| | || || Sbjct 27756 AGGGCGTAGAAGAGCTCACGGGCTCGGACCTCCTCCTTGCCGTGGTTCTTCCTGAGGTCG 27697 Query 110701 AAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCCCTTACG- 110759 | || || | || || |||||||| || || | |||| |||| || || ||| Sbjct 27696 AGGAACTCGAAGACGTCAGAGTGCCAGGGCTCAATGTAGATGGCGAAGGCACCTGGACGC 27637 Query 110760 --ACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATA 110817 || |||| | || ||||| || ||| |||||||| | |||||||| | Sbjct 27636 TTGTTGCCACCCTGATCGACGTAGCGAGCGGTGTTGTTGAAGACGCGAAGCATAGGCACG 27577 Query 110818 ATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCGTGG 110877 || || | || ||| || || || ||| || | |||| ||| |||| Sbjct 27576 ATACCGTTAGAGACACCGTTAGTTCCGGCAATGTATGAGCCGGTACCACGGATGCAGTGG 27517 Query 110878 ATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACA-CTCTGTGAGTGTACC 110936 || | | || || ||||| ||| ||| || || || || ||| |||| || | Sbjct 27516 ATGTTGAGGCCGATGCCACCAGCCGTCTTGCTGATCATGGCGCAGGTCT-TGAGAGTGTC 27458 Query 110937 ATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGG 110996 || || || || ||||| || |||| ||| | || ||||| || ||||| ||||| Sbjct 27457 GTAGATGCCGTCGATCGAGTCGTCCTTCATGGTGACCAGGAAGCACGATGACATTTGAGG 27398 Query 110997 ACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCT-TGGGACA 111055 || || || || |||||||| || || | ||||| |||| || | | |||| Sbjct 27397 GTTGGGTGTACCAGCGTTGAAGAGGGTGGGGGAGGCATGGGTGAA-GTACTTCTCCGACA 27339 Query 111056 TCTTGTTGTATGTGTCGAGTGC-----GGAGGGTACATCTTTACCGTGAATACCAATGGC 111110 | |||||| ||||||| || || || || | ||||| || || | || Sbjct 27338 TGAGGTTGTAAGTGTCGATGGCCTCGTCGATGGAAC-----TCCCGTGGATGCCGACAGC 27284 Query 111111 AACTCGCATGAACATATATTGAGG 111134 ||||||||||| ||| | ||| || Sbjct 27283 AACTCGCATGAGCATGTGTTGGGG 27260 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588911175829000