Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689965.1_202016-07-20] 8,805 sequences; 43,736,635 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq248 340 3e-88 seq4834 165 2e-35 >seq248 Length=52618 Score = 340 bits (376), Expect = 3e-88 Identities = 1105/1707 (65%), Gaps = 67/1707 (4%) Strand=Plus/Minus Query 212732 GTCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTC 212791 ||| || |||||||| ||||| | |||| |||| ||||||||| |||||| | | | | Sbjct 28867 GTCGGCAGCCATGTCGATGATGACCTTCTGCGAGATCTCCCACACTGTCTTGTACAGTGC 28808 Query 212792 TTTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGACCCCCTGTG---TATGGTCAG 212848 |||| | || || | |||||| | |||||| | || || | ||| |||| | | Sbjct 28807 CTTGATGCGGTCGGGAATGCCGGGCACGTTCTGAATCGAGCCGCCGTGGGCTATGATGCG 28748 Query 212849 CTGCAGGCGCATGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTG-ACCAGGTGAG 212907 | | ||| | ||||||||| || || || || || || | | | ||| || Sbjct 28747 GTTCTT---CATCTGCTCGTTCCACAGACCT-TGCTCGACAAGCTCACGCAGCAGCCAAG 28692 Query 212908 GGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGG 212967 ||||||| | ||||| || || | |||||| | | ||||| ||| ||||| | Sbjct 28691 GGTTGACGACTTGGAACTCGCCGGCGAGCACACGTCGGGTGTAAAGGTTGCTCGTGTAAG 28632 Query 212968 GCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCA 213027 |||| | || ||||||| || || ||||| || || |||||||| || || | Sbjct 28631 GCTCAAAGCACTCGTTGAAGCCGAGGATCTGACTTGTCGAAGCGGTGGGCATAGGGGCGA 28572 Query 213028 CCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCCC 213087 |||||| ||| | | ||||| || | ||| |||| | ||| |||||||||| Sbjct 28571 GCAGGAGGGAGTTTCGGAGACCGTGTGCGGCAATGTTGCGCTTGATCTCGGCCCAGTCCC 28512 Query 213088 ATCTGCCAGACAGGTCCTC-GTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTG 213146 | || |||| | | | || ||| | ||| | |||| ||| ||| Sbjct 28511 A-------GA---GTCCGCTGGGGGTGACTCCCCAGAGGTCGTATTGCAGCTCGCCCTTG 28462 Query 213147 CTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGAC 213206 || |||||||||| ||| | ||||| || |||||||||| |||||||| || Sbjct 28461 CTGGTCGGGCTGCCCTCGTATGTCTCGTAGGTCCCGAGCTCCTTGGCGAGCTCGCACGAT 28402 Query 213207 GCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCT 213266 || || || |||| |||||| || || || |||| ||||||||||||||||||| Sbjct 28401 CGCTCGAGAGCGGCGTGGTAGATCGTCTCGAAGATCTGGATGTTGAGCTTCTTGGCCTCG 28342 Query 213267 GGGG------ACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACC 213320 ||| ||| | | ||| |||||| || | || || || || | ||| Sbjct 28341 GGGCTGTCGAACGCGTAACCCATGATCATG------AAAGCGTCGGCGAGACCGTTGACT 28288 Query 213321 CCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTGGAGCACTCCTCCAAGGGGTAAAAG 213380 ||||| |||||||| | ||| | || ||| ||||| ||| | ||||| || Sbjct 28287 CCGATACCGATGGGGCGGTGGCGCATGTTGGACTTCTTCGCCTCGGGAACAGGGTAGTAG 28228 Query 213381 TTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTAC 213440 ||| |||||||||||||||||||||| | || ||||| || | | || | | Sbjct 28227 TTGACATCGATGATCTTGTTGAGGTTGCCACAAACGACCTTGGTAACCTCGTGGAGCTTC 28168 Query 213441 TCG----------TGATTGAACACGTAGCCCCCGTCC---TGCACAAACTCAGGCAGGGC 213487 | | | ||| ||| | | ||| || || | ||| || || Sbjct 28167 TTGAAGTCGTATGTCCTTGTGTTCGT-GTGCGAGTCGATGTGGACGTAAGAAGGTAGAGC 28109 Query 213488 GATGCTGGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGT 213547 || ||||| |||||||| || || ||||| | | | |||||||||||||||| || Sbjct 28108 CATACTGGCAAGGTTGCAGACAGCGACCTCATCCGGAGCGCTGTACTCCATGATCTCCGT 28049 Query 213548 GCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGA 213607 |||||||||| ||| ||||||||| ||||||| ||||| ||||| |||||||| Sbjct 28048 GCACAGGTTGGAGCACTTGATGGTGCCGAGGTTCTTTTGGTTCGACTTGCGGTTGGCAGC 27989 Query 213608 ATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCA 213667 |||||||| |||||| | ||| || ||||| ||| | | | || | | ||| Sbjct 27988 GTCCTTGTAAAGCATGAAAGGGTTGCCAGTCTCCGTCTGAGCCTCGAGAACGGCGTACCA 27929 Query 213668 GAGGTACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGCCTCGTACTGTTCGTA 213727 || | ||||||||| || | || || | | |||||||| ||||| Sbjct 27928 AAGCTTTTGGGCCTTGACGGTTCGGCGAGCACGACC---CTCACGCTCGTACTTCTCGTA 27872 Query 213728 GAGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGGATGCGGGACACAT 213787 ||| | | ||| |||| ||| |||| | || || || || ||||| ||||| Sbjct 27871 GAGAGCCTCGAACTCGTCGCCGTAGACATCAGCGAGACCGGGGCACTCAGCGGGGCACAT 27812 Query 213788 GAGGCTCCAGTCCCCGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGC 213847 || ||| || |||| | | ||||| || |||||||| ||| |||| ||| || || Sbjct 27811 CAGCGACCACTCTCCGTTCTGTTCGACTCGCTTCATGAACAAGTCAGGGATCCAAAGGGC 27752 Query 213848 GGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAA 213907 | ||| || || | || | ||| ||| || ||| || | || || || || Sbjct 27751 GTAGAAGAGCTCACGGGCTCGGACCTCCTCCTTGCCGTGGTTCTTCCTGAGGTCGAGGAA 27692 Query 213908 GTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCCTCTT 213964 || |||| ||| | |||||| ||||| ||||||||||| ||||| || | || | || Sbjct 27691 CTCGAAGACGTCAGAGTGCCAGGGCTCAATGTAGATGGCGAAGGCACCTGGACGCTTGTT 27632 Query 213965 GCCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCC 214024 ||| ||||| || || | || ||||||||| ||| || | || || | || Sbjct 27631 GCCACCCTGATCGACGTAGCGAGCGGTGTTGTTGAAGACGCGAAGCATAGGCACGATACC 27572 Query 214025 GTTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTCATGGA 214084 ||| || ||||| ||||| || || || ||||||| | | | | | ||| Sbjct 27571 GTTAGAGACACCGTTAGTTCCGGCAATGTATGAGCCGGTACCACGGATGCAGTGGATGTT 27512 Query 214085 GAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGAT 214144 ||| || |||||||| || |||| ||||||||||||| | | | ||| || ||| Sbjct 27511 GAGGCCGATGCCACCAGCCGTCTTGCTGATCATGGCGCAGGTCTTGAGAGTGTCGTAGAT 27452 Query 214145 GCCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGA 214204 |||| | || ||| || | | | | | || |||||| || | || || ||| Sbjct 27451 GCCGTCGATCGAGTCGTCCTTCATGGTGACCAGGAAGCACGATGACATTTGAGGGTTGGG 27392 Query 214205 CGAGCCAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCCT 214264 | |||| |||||| || |||||| ||||||| | | |||| | || | ||| | Sbjct 27391 TGTACCAGCGTTGAAGAGGGTGGGGGAGGCATGGGTGAAGTACTTCTCCGACATGAGGTT 27332 Query 214265 GTAGGTCTCCAGGACTGAGGGGATGTCGTGCTTGTGGATCTGTAGAGCGCACCT--CATC 214322 ||| || || | | | | |||| | ||||| || || ||| || ||| Sbjct 27331 GTAAGTGTCGATGGCCTCGTCGATGGAACTCCCGTGGA--TGCCGACAGCAACTCGCATG 27274 Query 214323 AGCATGTGCTGGGGCCTCTCTATGGGTCCTTTGGGGCCCTTG------AGCAGGTAGGAG 214376 |||||||| ||||| | ||| | | |||| ||| ||| ||||| |||||| Sbjct 27273 AGCATGTGTTGGGGGCGCTC--GGCGACCTT----GCCGTTGATGCGCAGCAGATAGGAG 27220 Query 214377 CGCTCCAGAGTCTTGAACCCAAAGTAG 214403 ||||| || |||||||| || |||||| Sbjct 27219 CGCTCGAGGGTCTTGAAGCCGAAGTAG 27193 >seq4834 Length=10274 Score = 165 bits (182), Expect = 2e-35 Identities = 364/536 (68%), Gaps = 20/536 (4%) Strand=Plus/Minus Query 47860 CTCA-AAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCCATGAAGAGGAAGGGGTTGG 47918 |||| |||||||||||||| || | || ||||||||||||||||||| |||||| || | Sbjct 9567 CTCACAAGAAGTTTGTCTTGCCTTGCAGCGAGATGTTCTCCATGAAGTCGAAGGGATTTG 9508 Query 47919 GTGTGTTATACACCCGTGTCAGGCCCATCTGTT-CCAGCAGGTGATCCGCGACGTACTCG 47977 | ||| || | | || ||| | | ||||||| | || ||||| | ||| Sbjct 9507 TGGCGTTGTAGTGCT-TCTCGTTCCCGAGGGCTACCAGCAGTCGGTCAGCGACAAATTCG 9449 Query 47978 ATGTATTTTGACATGAGG-GTGATGTTCATGCCTATGAGGGACACGGGCAAAGCCTTTGT 48036 ||||| | ||| || ||| ||||||||| || | || ||| | ||| | || Sbjct 9448 ATGTACTGGCTCATAAGTCGTGC-GTTCATGCCGATCAATGAACAGGGAAGAGCATCGGT 9390 Query 48037 GAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTGCTTAACG----CGGGACT 48092 || || ||| ||| || || | || | | || || |||| |||| Sbjct 9389 CAGGAAAGCCTGCTCAATGGTGACAGACTCGGCAATGATGCGCAGAACGACATCGGGG-- 9332 Query 48093 CTGAGG--GTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAAAGTCCCTGTGCAA 48150 || || | || ||| ||||| || |||||| ||| |||||||| |||||| Sbjct 9331 -TGCGGCCGCTTCTTG---AGGTGGCTGA---AGAGCAAGCAAGCAAAGTCGGTGTGCAG 9279 Query 48151 GCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTG 48210 || ||||| |||||||||||| ||||||||||| |||||| ||||||| || | || Sbjct 9278 ACCCTCGTCTCGGCTGATGAGCTCGTTGGAGAAGGTGAGACCGGGCATGAGACCACGCTT 9219 Query 48211 TTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAA 48270 ||||||||||| || | ||||||||||| ||||||||||| ||||| || || || || Sbjct 9218 CTTGAGCCAGAAGATGGAGGCGAAAGAGCCGGAGAAGAAGATACCCTCTACGGCAGCAAA 9159 Query 48271 CGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAGGAAAGCGCCCAGTC 48330 || || | ||| | || | | || | ||| ||||||| || ||||| || Sbjct 9158 GGCAACCAGGCGCTCGGCAAAGGTGGAGTCTTCGTCGTTGATCCAGCGCAGGGCCCACTC 9099 Query 48331 TGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAGCTTCTTGCACT 48386 ||||| | ||||| | || || ||||| || || |||||| | || || || Sbjct 9098 GGCCTTTTGCTTGACGACGGGAATGGTCTCCATCGCGTCGAAGAGGTACTCGCGCT 9043 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931430273171200