Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689965.1_202016-07-20] 8,805 sequences; 43,736,635 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq248 334 1e-86 seq4834 167 4e-36 >seq248 Length=52618 Score = 334 bits (370), Expect = 1e-86 Identities = 759/1122 (68%), Gaps = 27/1122 (2%) Strand=Plus/Minus Query 221359 CGGACTCCCATCGTACGACTCGTAGGGACCGTACAGTTCGGCCTGGGCGCAAGACTGCGT 221418 ||| || || ||||| | |||||||| ||| | | ||| | |||| || || Sbjct 28456 CGGGCTGCCCTCGTATGTCTCGTAGGTCCCGAGCTCCTTGGCGAGCTCGCACGATCGCTC 28397 Query 221419 CAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGAGA 221478 || || ||||||||||| ||||| |||||| ||||||| ||||||||||||| | Sbjct 28396 GAGAGCGGCGTGGTAGATCGTCTCGAAGATCTGGATGTTGAGCTTCTTGGCCTCGGG-GC 28338 Query 221479 AGTGAAGGGCATA-CGCAGCATC-TGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCG 221536 || | || || | || ||| |||||| ||||||| || || | |||||||||||| Sbjct 28337 TGTCGAACGCGTAACCCATGATCATGAAAG-CGTCGGCGAGACCGTTGACTCCGATACCG 28279 Query 221537 ATGGGCCTGTGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCG 221596 ||||| | ||| | | ||||||| ||| || || || || || ||||||| ||| Sbjct 28278 ATGGGGCGGTGGCGCATGTTGGACTTCTTCGCCTCGGGAACAGGGTAGTAGTTGACATCG 28219 Query 221597 ATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTG 221656 || | ||||||||||| | | ||| || |||||| ||||||| | | | Sbjct 28218 ATGATCTTGTTGAGGTTGCCACAAACGACCTTGGTAACCTCGTGGAGCTTCTTGAAGTCG 28159 Query 221657 AACACCAACTCGCCGCCGTCGTG-GAGGGGTTCC--ACAAAAGCGTTTAGGGCAACGCTG 221713 | | || | ||| ||| ||| | | || ||| ||| || | ||| Sbjct 28158 TATGTC--CTTGTGTTCGT-GTGCGAGTCGATGTGGACGTAAGAAGGTAGAGCCATACTG 28102 Query 221714 GCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGG 221773 || ||||| || || || ||||| ||| | | |||| |||||||| || || ||| Sbjct 28101 GCAAGGTTGCAGACAGCGACCTCATCCGGAGCGCTGTACTCCATGATCTCCGTGCACAGG 28042 Query 221774 TTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTG 221833 ||| |||||||||||| || |||| || || || |||||||| ||||||||||||||| Sbjct 28041 TTGGAGCACTTGATGGTGCCGAGGTTCTTTTGGTTCGACTTGCGGTTGGCAGCGTCCTTG 27982 Query 221834 TAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCT 221893 || ||||| || || |||||||||| ||||||| | |||| || ||| || | | Sbjct 27981 TAAAGCATGAAAGGGTTGCCAGTCTCCGTCTGAGCCTCGAGAACGGCGTACCAAAGCTTT 27922 Query 221894 CTGGCGCTCACCGTCCTCTTGACTGCACCCTCGGTCTTTTCATACCCGGTATAGAGCATG 221953 ||| | || || | | |||||| || | | | | ||| ||||| Sbjct 27921 TGGGCCTTGACGGTTCGGCGAGCACGACCCTCACGCTCGTACTTCTC-GTAGAGAGC--C 27865 Query 221954 TCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACTC 222013 || |||| || ||||| | || | || || || ||| ||||| |||||||| | Sbjct 27864 TCGAACTCGTCGCCGTAGACATCAGCGAGACCGGGGCACTCAGCGGGGCACATCAGCGAC 27805 Query 222014 CAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAG 222073 || | ||| | || ||| | || |||||| | ||| |||||||| || || | ||| Sbjct 27804 CACTCTCCGTTCTGTTCGACTCGCTTCATGAACAAGTCAGGGATCCAAAGGGCGTAGAAG 27745 Query 222074 AGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAA 222133 || || | || || ||||||| ||||| ||| ||||| || || | ||||| || Sbjct 27744 AGCTCACGGGCTCGGACCTCCTCCTTGCCGTGGTTCTTCCTGAGGTCGAGGAACTCGAAG 27685 Query 222134 ATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCC 222193 | ||||| |||||| ||||| | |||| ||| | || || || ||||||||||||||| Sbjct 27684 ACGTCAGAGTGCCAGGGCTCAATGTAGATGGCGAAGGCACCTGGACGCTTGTTGCCACCC 27625 Query 222194 TGATCCACCATCCTCTCCAGAG----CGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTT 222249 ||||| | | | | || | |||||||| |||||| | || || | ||||| Sbjct 27624 TGATCGA----CGTAGCGAGCGGTGTTGTTGAAGACGCGAAGCATAGGCACGATACCGTT 27569 Query 222250 GGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGT-TACTGGCAG-AC 222307 || |||||| || || |||||| | ||| | || | | | | ||| | Sbjct 27568 AGAGACACCGTTAGTTCCGGCAATGTATGAGCCG--GTACCACGGATGCAGTGGATGTTG 27511 Query 222308 ATGCCGATACCACC-GGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGAT 222366 | |||||| ||||| | ||| || | ||||||||||||| ||||||||||||| ||| Sbjct 27510 AGGCCGATGCCACCAGCCGTCTTGC-TGATCATGGCGCAGGTCTTGAGAGTGTCGTAGAT 27452 Query 222367 GCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGT 222426 ||| || || ||||| ||||| | | | | ||| || || || ||||| |||| |||| Sbjct 27451 GCCGTCGATCGAGTCGTCCTTCATGGTGACCAGGAAGCACGATGACATTTGAGGGTTGGG 27392 Query 222427 GGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTA 222468 | || ||||| || || ||||| ||| || || ||||| Sbjct 27391 TGTACCAGCGTTGAAGAGGGTGGGGGAGGCATGGGTGAAGTA 27350 >seq4834 Length=10274 Score = 167 bits (184), Expect = 4e-36 Identities = 185/247 (75%), Gaps = 0/247 (0%) Strand=Plus/Plus Query 25795 GCCATCGAGCACATACCCAGCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAAC 25854 || || ||| ||| ||| | ||||| ||||| ||||||| || ||||||||| Sbjct 9063 GCGATGGAGACCATTCCCGTCGTCAAGCAAAAGGCCGAGTGGGCCCTGCGCTGGATCAAC 9122 Query 25855 AGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTT 25914 | | | | || |||| |||||| ||||| ||||||||||| || ||||| ||||| Sbjct 9123 GACGAAGACTCCACCTTTGCCGAGCGCCTGGTTGCCTTTGCTGCCGTAGAGGGTATCTTC 9182 Query 25915 TTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTG 25974 ||| ||| || || || ||||||||||||||||| || || ||||||||| || Sbjct 9183 TTCTCCGGCTCTTTCGCCTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTC 9242 Query 25975 TACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTG 26034 ||| |||||||||||||||||| | ||||||||||| |||| || ||||| ||| || Sbjct 9243 ACCTTCTCCAACGAGCTCATCAGCCGAGACGAGGGTCTGCACACCGACTTTGCTTGCTTG 9302 Query 26035 CTCTACA 26041 |||| || Sbjct 9303 CTCTTCA 9309 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928742569019200