Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689965.1_202016-07-20] 8,805 sequences; 43,736,635 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq2372 91.5 1e-12 >seq2372 Length=9363 Score = 91.5 bits (100), Expect = 1e-12 Identities = 156/224 (70%), Gaps = 12/224 (5%) Strand=Plus/Minus Query 480552 CGAAGACGGAGTACAAGATGAAGTGT--ACTTTCTTTAGAAACATTATAATCAGCTAGAG 480609 || |||||||| || | ||||||||| ||| | ||| || || || |||| || | Sbjct 221 CGGAGACGGAGGACCAAATGAAGTGTGGACTCTTTTTGGATG--TTGTAGTCAGAAAGGG 164 Query 480610 TTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTC 480669 | | | ||| || | ||||| || || || || | || |||||||| |||||||| | Sbjct 163 TGCGGCCATCCTCCAACTGCTTGCCCGCGAAGATCAATCGCTGTTGATCCGGAGGAATAC 104 Query 480670 CTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGT----T 480725 | ||||||||||||||||| ||||| || ||||| || || | | | | Sbjct 103 CCTCCTTGTCTTGAATCTTGGTCTTGACGTTGTCGATAGT----GTCTGAGGACTCGACT 48 Query 480726 TCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || || || || |||||||| ||||| ||||| || || Sbjct 47 TCGAGTGTGATTGTCTTGCCGGTGAGGGTCTTGACGAAGATCTG 4 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3267801510828140