Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689965.1_202016-07-20] 8,805 sequences; 43,736,635 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq248 170 2e-37 seq4834 114 2e-20 >seq248 Length=52618 Score = 170 bits (188), Expect = 2e-37 Identities = 552/846 (65%), Gaps = 21/846 (2%) Strand=Plus/Plus Query 75211 CCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGT 75270 ||| || ||||| ||||||| || || |||||||||||||| ||| || | Sbjct 27259 CCCCCAACACATGCTCATGCGAGTTGCTGTCGGCATCCACGGGAGTTCCATCGACGAGGC 27318 Query 75271 CTTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCT 75329 | | || || ||| || ||||| | | ||| |||| || || | || ||||||| Sbjct 27319 CATCGACACTTACAACCTCATGTCGGAGAAGTAC-TTCACCCATGCCTCCCCCACCCTCT 27377 Query 75330 TCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 75389 |||| ||||||||||| | || || ||||| |||||||| || ||| ||||| | Sbjct 27378 TCAACGCTGGTACACCCAACCCTCAAATGTCATCGTGCTTCCTGGTCACCATGAAGGACG 27437 Query 75390 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 75449 |||| ||| |||| ||||| | ||||| | | || || ||| ||| ||||| Sbjct 27438 ACTCGATCGACGGCATCTACGACACTCTCAAGACCTGCGCCATGATCAGCAAGACGGCTG 27497 Query 75450 GGGGTATTGGGATGCACATCCA-TG-AT--GTGAGAGCCAATAAATCTCGTATTCGGGGG 75505 | || || || | ||||||| || || ||| | | | | | ||| || Sbjct 27498 GTGGCATCGGCCTCAACATCCACTGCATCCGTGGTACCGGCTCATAC----ATTGCCGGA 27553 Query 75506 ACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGC 75565 || || ||| || | ||||| | || ||||||||||| || ||| ||| || ||| Sbjct 27554 ACTAACGGTGTCTCTAACGGTATCGTGCCTATGCTTCGCGTCTTCAACAACACCGCTCGC 27613 Query 75566 TATGTAAATCAAGCGGG------GCGTCGCAAGGGGTCCATCGCGGTCTACTTGGAACCA 75619 || || |||| | || ||||| ||| | || |||| ||||| | || || Sbjct 27614 TACGTCGATCAGGGTGGCAACAAGCGTCC--AGGTG-CCTTCGCCATCTACATTGAGCCC 27670 Query 75620 TGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCT 75679 ||||| | || || | |||||||| || | | ||||| || | || |||| Sbjct 27671 TGGCACTCTGACGTCTTCGAGTTCCTCGACCTCAGGAAGAACCACGGCAAGGAGGAGGTC 27730 Query 75680 CGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAG 75739 || | || ||||| | |||| ||||| || ||| | ||||||||||| || || Sbjct 27731 CGAGCCCGTGAGCTCTTCTACGCCCTTTGGATCCCTGACTTGTTCATGAAGCGAGTCGAA 27790 Query 75740 GAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTG 75799 || || | ||||| || | || || | || || |||||| | || | Sbjct 27791 CAGAACGGAGAGTGGTCGCTGATGTGCCCCGCTGAGTGCCCCGGTCTCGCTGATGTCTAC 27850 Query 75800 GGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACT 75859 || || ||||| || || |||||| ||||| || |||||| | || || Sbjct 27851 GGCGACGAGTTCGAGGCTCTCTACGAGAAGTACGAGCGTGAGGGTCGTGCTCGCCGAACC 27910 Query 75860 GTACCAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACC 75918 || | || | | | | ||||| | || ||||| | | |||||||||||||| | || Sbjct 27911 GT-CAAGGCCCAAAAGCTTTGGTACGCCGTTCTCGAGGCTCAGACGGAGACTGGCAACCC 27969 Query 75919 ATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAAT 75978 | |||||||||||||| ||| ||| ||| ||||||||||| | || || || Sbjct 27970 TTTCATGCTTTACAAGGACGCTGCCAACCGCAAGTCGAACCAAAAGAACCTCGGCACCAT 28029 Query 75979 CAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGT 76038 |||| |||| || || |||||||| || | ||||||| | | ||||||| ||||| Sbjct 28030 CAAGTGCTCCAACCTGTGCACGGAGATCATGGAGTACAGCGCTCCGGATGAGGTCGCTGT 28089 Query 76039 TTGCAA 76044 ||||| Sbjct 28090 CTGCAA 28095 >seq4834 Length=10274 Score = 114 bits (126), Expect = 2e-20 Identities = 130/173 (75%), Gaps = 1/173 (1%) Strand=Plus/Plus Query 65056 ACAAAGTCTCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTC 65115 || ||| ||| | |||| ||||||||||| |||| ||||| || |||||||||||| Sbjct 9124 ACGAAGACTC-CACCTTTGCCGAGCGCCTGGTTGCCTTTGCTGCCGTAGAGGGTATCTTC 9182 Query 65116 TTCTCCGGGTCATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTA 65175 |||||||| || ||| | | || | ||| | |||||||| ||||||||||| || || Sbjct 9183 TTCTCCGGCTCTTTCGCCTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTC 9242 Query 65176 TGCTTCTCAAATGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGC 65228 |||||| || || || || |||||| |||||||| ||| || ||||| Sbjct 9243 ACCTTCTCCAACGAGCTCATCAGCCGAGACGAGGGTCTGCACACCGACTTTGC 9295 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596503940058400