Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689965.1_202016-07-20] 8,805 sequences; 43,736,635 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq7536 102 2e-16 seq248 102 2e-16 >seq7536 Length=20682 Score = 102 bits (112), Expect = 2e-16 Identities = 119/161 (74%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 251410 AGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGACCC 251469 |||||||| | | ||||||||||| | ||| || ||| |||||| | | || || Sbjct 6892 AGACCACAGATGTCACACACATGGAGCCGGTACGCGTCACTGGCGTCAAACATTCGCTCC 6951 Query 251470 TTGGTGAAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGA 251529 || |||| || |||||| || ||||| |||||||||||||| || ||||||||| Sbjct 6952 TTCAAGAAGGAAGCCATACCGTGCGAGATCATGCAATCACGCTCCATCTCTCCGAAACGA 7011 Query 251530 AGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGT 251570 |||||||| || ||| | |||||| | |||||||| || Sbjct 7012 AGACCACCGTCACGACTACGACCCTCCACGGGCTGACGCGT 7052 >seq248 Length=52618 Score = 102 bits (112), Expect = 2e-16 Identities = 342/524 (65%), Gaps = 9/524 (2%) Strand=Plus/Minus Query 155626 CGCTGTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCT 155685 ||||||| || | ||||| ||||||||| || | |||||||||||| | ||||| | Sbjct 28070 CGCTGTACTCCATGATCTCCGTGCACAGGTTGGAGCACTTGATGGTGCCGAGGTTCTTTT 28011 Query 155686 GGTTAGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCT 155745 |||| || || | ||| ||| |||||||| || ||| | ||| | || |||||| ||| Sbjct 28010 GGTTCGACTTGCGGTTGGCAGCGTCCTTGTAAAGCATGAAAGGGTTGCCAGTCTCCGTCT 27951 Query 155746 GTGCGTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTG-TATCTGCCT 155804 | || || |||| ||| || | |||| || | | | | | | || Sbjct 27950 GAGCCTCGAGAACGGCGTACCAAAGCTTTTGGGCCTTGA-CGGTTCGGCGAGCACGACCC 27892 Query 155805 TCCGACTCATATTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCA 155864 || ||| || ||| || || | | | || || ||||| |||| || || Sbjct 27891 TCACGCTCGTACTTCTCGTAGAGAGCCTCGAACTCGTCGCCGTAGACATCAGCGAGACCG 27832 Query 155865 GGGCACTTATCGGGGCAAAACAGCGACCAAATTTTATTACCGAT-TACACGCTCCATAAA 155923 ||||||| | ||||||| | |||||||| | | | | | | | || |||| ||| || Sbjct 27831 GGGCACTCAGCGGGGCACATCAGCGACC-ACTCTCCGTTCTGTTCGACTCGCTTCATGAA 27773 Query 155924 TACATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGA-CTCCTCATCGCCGT 155982 | ||| ||||| || ||||| || || | | || || |||||| | ||||| Sbjct 27772 CAAGTCAGGGATCCAAAGGGCGTAGAAGAGCTCAC-GGGCTCGGACCTCCTCCTTGCCGT 27714 Query 155983 GATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAG 156042 | ||||||| || || | ||| || | |||| || ||||| | || || | Sbjct 27713 GGTTCTTCCTGAGGTCGAGGAACTCGAAGACGTCAGAGTGCCAGGGCTCAATGTAGATGG 27654 Query 156043 CAAAACTACC---ATTCCTCTTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGA 156099 | || ||| | | | |||||||||||||| || || ||||| || || ||||||| Sbjct 27653 CGAAGGCACCTGGACGCTTGTTGCCACCCTGATCGACGTAGCGAGCGGTGTTGTTGAAGA 27594 Query 156100 CACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCG 156143 | | |||||||| | ||||| || || || || |||||| Sbjct 27593 CGCGAAGCATAGGCACGATACCGTTAGAGACACCGTTAGTTCCG 27550 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471651558277285