Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689965.1_202016-07-20] 8,805 sequences; 43,736,635 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq248 181 1e-39 seq4834 159 4e-33 seq1945 134 2e-25 seq8426 109 7e-18 seq6407 109 7e-18 seq5159 102 1e-15 seq1920 87.8 2e-11 >seq248 Length=52618 Score = 181 bits (200), Expect = 1e-39 Identities = 275/393 (70%), Gaps = 15/393 (4%) Strand=Plus/Minus Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124 ||| ||||||||||| || |||| ||| |||||||| ||||| ||||||| ||||| || Sbjct 27625 CTGATCGACGTAGCGAGCGGTGTTGTTGAAGACGCGAAGCATAGGCACGATACCGTTAGA 27566 Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184 | ||||| || || || | ||| | ||||| | || | ||| | | ||| Sbjct 27565 GACACCGTTAGTTCCGGCAATGTATGAGCCGGTACCACGGATGCAGTGGATGTTGAGGCC 27506 Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244 |||||| || |||| |||| ||| | ||||| ||||| |||||||||||||| || Sbjct 27505 GATGCCACCAGCCGTCTTGCTGATCATGGCGCAGGTCTTGAGAGTGTCGTAGATGCCGTC 27446 Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304 |||||||||| |||||||| || || |||||||| || |||| |||| | || || Sbjct 27445 GATCGAGTCGTCCTTCATGGTGACCAGGAAGCACGATGACATTTGAGGGTTGGGTGTACC 27386 Query 1630305 GGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAGGT 1630364 ||||||||||| ||||| | || |||||| ||| | ||||||| || ||| || Sbjct 27385 AGCGTTGAAGAGGGTGGGGGAGGCATGGGTGAAGTACTTCTCCGACATGAGGTTGTAAGT 27326 Query 1630365 GGCGAGCACGCGCGCCAGCGCATCGTCCACGTCGGCAAACCCATAGTGGCCGATGGCGAC 1630424 | || | || |||| || || | ||| | | ||||| || || Sbjct 27325 GTCG------------ATGGCCTCGT---CGATGGAACTCCCGTGGATGCCGACAGCAAC 27281 Query 1630425 GCGCATGAGCATGTACTGGGGCCGCTCGACGAC 1630457 ||||||||||||| ||||| |||||| |||| Sbjct 27280 TCGCATGAGCATGTGTTGGGGGCGCTCGGCGAC 27248 Score = 96.9 bits (106), Expect = 4e-14 Identities = 103/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 1628465 TCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTGA 1628524 |||| || ||||| ||||| || || || ||| ||||||||||||||||||||| ||| Sbjct 27761 TCCAAAGGGCGTAGAAGAGCTCACGGGCTCGGACCTCCTCCTTGCCGTGGTTCTTCCTGA 27702 Query 1628525 GGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCT 1628584 ||||||| | |||| | ||| | |||||| ||||| | |||| ||| ||||| || Sbjct 27701 GGTCGAGGAACTCGAAGACGTCAGAGTGCCAGGGCTCAATGTAGATGGCGAAGGCACCTG 27642 Query 1628585 TGCGCTTGCCGCCGCC 1628600 |||||| ||| || Sbjct 27641 GACGCTTGTTGCCACC 27626 >seq4834 Length=10274 Score = 159 bits (176), Expect = 4e-33 Identities = 210/286 (73%), Gaps = 5/286 (2%) Strand=Plus/Minus Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238 ||| ||||| || ||||| | |||||| |||| ||| ||||||||||| || ||||| Sbjct 9278 ACCCTCGTCTCGGCTGATGAGCTCGTTGGAGAAGGTGAGACCGGGCATGAGACCACGCTT 9219 Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298 ||||||||| ||||||| | |||| ||| ||||| ||||| ||||| ||||| ||||| Sbjct 9218 CTTGAGCCAGAAGATGGAGGCGAAAGAGCCGGAGAAGAAGATACCCTCTACGGCAGCAAA 9159 Query 869299 GCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTTGATCCACTTCATCGCCCA 869358 | | | || ||||||||||||||| || | | || | ||||||||| || ||||| Sbjct 9158 GGCAACCAGGCGCTCGGCAAAGGTG--GA-GTCTTCGTCGTTGATCCAGCGCAGGGCCCA 9102 Query 869359 GTCGGCCTTTTTCCTCACCGAC-GGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTTT 869417 |||||||||| | | | |||| || | || || || ||| ||||||| || | Sbjct 9101 CTCGGCCTTTTGCTTGA-CGACGGGAATGGTCTCCATCGCGTCGAAGAGGTACTCGCGCT 9043 Query 869418 CGGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTC 869463 || ||||| | || |||||||| ||||| || || ||||| Sbjct 9042 GTGCGGGGTCGCGAATGTATGTGTCGATGAGGAGGGAGTATGTCTC 8997 Score = 118 bits (130), Expect = 1e-20 Identities = 165/231 (71%), Gaps = 3/231 (1%) Strand=Plus/Minus Query 869653 GATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGGACCTCCTTCATGAACCGGCC 869712 ||| ||||||||||| ||| | ||||||| | |||||||| ||||||| | Sbjct 8899 GATTTGGAAGCCGTAGAAGCATCGAGCCTCTGCTGCCTGGACCTCTGAGCTGAACCGCTC 8840 Query 869713 GGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAAAAAGCCAGGACGTGCTTGAT 869772 | | ||||||||| |||||||| || |||||||| || || |||||||| |||| Sbjct 8839 GACGAGGTTCTCGTTGACGATGCCATCTGACGCGGCGAAGAATGCGAGGACGTGGCTGAT 8780 Query 869773 AAAGTGGCGCTCGTCGTCGCTGAGC---GACACCCAGTGGACGGTGTCGGCGCTGAGGTC 869829 ||||| ||||||| |||| | | | |||||| | |||| | ||||| Sbjct 8779 GAAGTGTCGCTCGTTGTCGTTCAACTTGTTGTCCCAGTCGTGCATGTCCTTGGAAAGGTC 8720 Query 869830 CACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTGTACATCTCCCA 869880 | ||||||||| ||||||| ||| ||||| ||||| |||||||| | ||| Sbjct 8719 GATCTCCTCGGCCGTCCAGAACGATGCCTCTGCCTTCTTGTACATTTGCCA 8669 Score = 102 bits (112), Expect = 1e-15 Identities = 112/149 (75%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 868721 AAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGGCGTC 868780 || ||||| |||||||| | |||||||| |||||| | ||| || || | | Sbjct 9562 AAGAAGTTTGTCTTGCCTTGCAGCGAGATGTTCTCCATGAAGTCGAAGGGATTTGTGGCG 9503 Query 868781 TTGTAGTGCTTTTCGCATCCGAGCGACGCGAGCAGGCGGTCGGCGACAAACTCGATGTAC 868840 ||||||||||| ||| ||||| | | ||||| ||||| |||||||| ||||||||| Sbjct 9502 TTGTAGTGCTTCTCGTTCCCGAGGGCTACCAGCAGTCGGTCAGCGACAAATTCGATGTAC 9443 Query 868841 TGGCACATGAGGCCGGCGTTCATGCCGAT 868869 |||| ||| || | |||||||||||||| Sbjct 9442 TGGCTCATAAGTCGTGCGTTCATGCCGAT 9414 >seq1945 Length=4019 Score = 134 bits (148), Expect = 2e-25 Identities = 271/401 (68%), Gaps = 6/401 (1%) Strand=Plus/Minus Query 18088 GTCACCACCTTTGGCGAGTCGCACGGGGCGGGCGTCGGCTGCATCATCGACGGCGTGCCG 18147 ||||| |||| |||||||| ||| | || |||||||||||| |||| || || || Sbjct 3638 GTCACAACCTACGGCGAGTCTCACTGCGCCTCTGTCGGCTGCATCGTCGATGGTGTTCCC 3579 Query 18148 CCGTGCATGCCACTGGCCGAGGCCGACATCCAGCCTCAGTTGGATCGGCGCCGACCGGGC 18207 ||| | ||| | || | || | |||| ||||| ||| | || || ||||| ||| Sbjct 3578 CCGGGTATGGCCCTCTCTGATGACGACGTCCAGGTCCAGCTCAGCCGTCGTCGACCCGGC 3519 Query 18208 CAGGGCGCACTTTCCACGCCGCGCAACGAGCCCGATCGCGTCATCATCCAGTCGGGCACG 18267 ||| | || |||| |||||| ||||| || || ||| |||||||| || Sbjct 3518 CAGTCCAACCTGACCACCCCGCGCGACGAGAAAGACCGAGTCCAGATCCAGTCCGGTGTC 3459 Query 18268 GAGAACGGCCTCACGCTCGGCTCGCCCGTCGGCCTCTTTGTGGCCAACCGCGACCAGCGG 18327 || || ||| |||||||||| | ||| | | | | || |||| || || ||| Sbjct 3458 GAAAAGGGCATCACGCTCGGAACTCCCATTGCCATGCGCGTCCAGAACCAGGATCAACGG 3399 Query 18328 CCCGTCGACTATTCCGA---CATGTGCAAGGTG---CCGCGGCCCTCACACGCCGACTAC 18381 ||| |||||| | || || | | | || ||||| ||||| ||||| |||||| Sbjct 3398 CCCAACGACTACACGGACCGCACGCTCGACTTGTACCCGCGTCCCTCTCACGCTGACTAC 3339 Query 18382 ACCTACATGGCCAAGTACGGCATCAAGGCGTCGTCGGGCGGAGGCCGGTCGTCTGCCCGC 18441 |||||| | | |||||||| ||||||| ||||| ||||| ||| || || || Sbjct 3338 ACCTACCTCGAGAAGTACGGTGTCAAGGCTAGCTCGGGTGGAGGACGGAGCTCGGCTCGG 3279 Query 18442 GAGACCCTCATGCGCGTCGCCGCCGGCGCGGTCGCCGAGAA 18482 ||||| | ||| || || || ||||| || || ||||| Sbjct 3278 GAGACGATTGGGCGTGTGGCTGCAGGCGCCGTGGCGGAGAA 3238 Score = 87.8 bits (96), Expect = 2e-11 Identities = 78/98 (80%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 19095 GGCCTCGGCGAGCCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCG 19154 || ||||| || || ||||| || ||| |||||||| |||||| ||||||||||| || Sbjct 2909 GGTCTCGGTGAACCATGCTTCGATAAGCTCGAGGCCAAGCTCGCACACGCCATGCTCTCC 2850 Query 19155 ATCCCGGCCACCAAGGGATTCGAGATTGGCAGCGGGTT 19192 ||||| || ||||||| |||||| ||||| ||| || Sbjct 2849 ATCCCCGCTACCAAGGCCTTCGAGGTTGGCTCCGGCTT 2812 >seq8426 Length=20327 Score = 109 bits (120), Expect = 7e-18 Identities = 189/267 (71%), Gaps = 16/267 (6%) Strand=Plus/Plus Query 508914 TCTTCAACATCACCCAGATGTGCGGCTGCGTGGGCCAGCAGAGCAATGAGGGCCAGCGCA 508973 || |||||||| ||||||||| || || || |||||||||| | |||||| |||| Sbjct 3122 TCATCAACATCTCCCAGATGTCCGCTTGTGTCGGCCAGCAGATCGTCGAGGGCAAGCGTG 3181 Query 508974 TCCACTCCGAGTCGGGCTCGCGCACCCTGGGCTGCTACCGGCA---CGCCGAGGCCGTGC 509030 | | || ||||| || ||| || |||||| || | | ||| || | Sbjct 3182 TGCCCT-----TCGGGTTCCGATACC---GGACGCTACCA-CATTTCACAAAGGACGA-C 3231 Query 509031 CGCCG-CCCGAGAGCCGCGGCTTTGTGCGCAACTCGTACGAGCGCGGCCTCAACTCGCGC 509089 | | |||||||| || ||||||||| |||||||| ||| || |||| | | Sbjct 3232 TTCAGTCCCGAGAGTCGAGGCTTTGTGGAGAACTCGTATCTGCGAGGTCTCACGGCACAG 3291 Query 509090 GAGATGTTTCTGCACATGATCGGCGGG-CGCGAGGGCCTCGTCGACACGGCCGTCAAGAC 509148 ||| | || | ||| || |||||| |||||||| ||| |||||||||| |||||||| Sbjct 3292 GAGTTCTTCTTCCACGCCAT-GGCGGGTCGCGAGGGTCTCATCGACACGGCTGTCAAGAC 3350 Query 509149 GGCCGAGACGGGCTACATCCAGCGCCG 509175 |||||||||||| ||||| ||||| || Sbjct 3351 GGCCGAGACGGGATACATTCAGCGACG 3377 >seq6407 Length=15639 Score = 109 bits (120), Expect = 7e-18 Identities = 189/267 (71%), Gaps = 16/267 (6%) Strand=Plus/Plus Query 508914 TCTTCAACATCACCCAGATGTGCGGCTGCGTGGGCCAGCAGAGCAATGAGGGCCAGCGCA 508973 || |||||||| ||||||||| || || || |||||||||| | |||||| |||| Sbjct 3122 TCATCAACATCTCCCAGATGTCCGCTTGTGTCGGCCAGCAGATCGTCGAGGGCAAGCGTG 3181 Query 508974 TCCACTCCGAGTCGGGCTCGCGCACCCTGGGCTGCTACCGGCA---CGCCGAGGCCGTGC 509030 | | || ||||| || ||| || |||||| || | | ||| || | Sbjct 3182 TGCCCT-----TCGGGTTCCGATACC---GGACGCTACCA-CATTTCACAAAGGACGA-C 3231 Query 509031 CGCCG-CCCGAGAGCCGCGGCTTTGTGCGCAACTCGTACGAGCGCGGCCTCAACTCGCGC 509089 | | |||||||| || ||||||||| |||||||| ||| || |||| | | Sbjct 3232 TTCAGTCCCGAGAGTCGAGGCTTTGTGGAGAACTCGTATCTGCGAGGTCTCACGGCACAG 3291 Query 509090 GAGATGTTTCTGCACATGATCGGCGGG-CGCGAGGGCCTCGTCGACACGGCCGTCAAGAC 509148 ||| | || | ||| || |||||| |||||||| ||| |||||||||| |||||||| Sbjct 3292 GAGTTCTTCTTCCACGCCAT-GGCGGGTCGCGAGGGTCTCATCGACACGGCTGTCAAGAC 3350 Query 509149 GGCCGAGACGGGCTACATCCAGCGCCG 509175 |||||||||||| ||||| ||||| || Sbjct 3351 GGCCGAGACGGGATACATTCAGCGACG 3377 >seq5159 Length=21689 Score = 102 bits (112), Expect = 1e-15 Identities = 146/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||| ||||| ||| | | ||| || || || ||||| ||||||||||| | || Sbjct 5701 GCTTGGAGAGTTCACCGGGGAGGATAAGTCGGACAGCGGTTTGGATCTCGCGGGCAGAGA 5760 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || |||||| || || || | |||||||| ||||||| |||| | Sbjct 5761 TGGTCGACTTCTTGTTGTAGGATGCAAGCTTGGAGGCCTCGGATGCGATGCGCTCGAAGA 5820 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||| | ||| || ||||||| || | ||| | |||||| ||||| || |||||||| Sbjct 5821 TGTCTTGGACGAAGGAGTTCAGGATGGCCATAGCCTTGTTTGAGATACCAGTGTCGGGGT 5880 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 ||||||||||||| || ||||||| Sbjct 5881 GCACCTGCTTGAGGACACGGTAGATG 5906 >seq1920 Length=30349 Score = 87.8 bits (96), Expect = 2e-11 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||| ||||| ||| | | ||| || || ||||| || ||||||||||| | | || Sbjct 11130 GCTTGGAGAGTTCACCGGGGAGGATGAGTCGGACGGCTGTTTGGATCTCGCGTGCGGAGA 11189 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| | |||||| | || || | || |||| ||||||| |||| | Sbjct 11190 TGGTGCTCTTCTTGTTGTATGATGCGAGTTTGGAAGCTTCGGATGCGATGCGCTCGAAGA 11249 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||| | || || ||||| | || | ||| | |||||||||||| || |||||||| Sbjct 11250 TGTCTTGTACGAAGGAGTTGAGGATGGCCATGGCCTTGTTGGAGATACCAGTGTCGGGGT 11309 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | || |||||||| || ||||||| Sbjct 11310 GGACTTGCTTGAGGACACGGTAGATG 11335 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106416620466185