Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689965.1_202016-07-20] 8,805 sequences; 43,736,635 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq8733 100 2e-16 seq8288 100 2e-16 seq6374 100 2e-16 >seq8733 Length=23276 Score = 100 bits (110), Expect = 2e-16 Identities = 112/150 (75%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 34494 CGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTT 34553 ||| || | |||||| || || |||| |||||| ||||||| |||||||||||||| Sbjct 1385 CGGGCGACTAAGCGCGCGAGCAATGTCGGTCATGTTTGCGATGACGGTCTTGATGCCGTT 1326 Query 34554 GCCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGC 34613 ||||| ||||| | ||||| || | | ||||| ||||||||||||||| |||| Sbjct 1325 TCCCTTGCCTTCAATCTTGGTCTGGAGGAGGGGCATCTTGTAGCGGTAGAACTTGTCCTG 1266 Query 34614 CACATTGCGGTTAACGTTCACAGTCCCCAT 34643 |||| | |||||| |||||| |||| Sbjct 1265 GACATCTCTACGAACGTTAACAGTCGCCAT 1236 >seq8288 Length=12001 Score = 100 bits (110), Expect = 2e-16 Identities = 112/150 (75%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 34494 CGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTT 34553 ||| || | |||||| || || |||| |||||| ||||||| |||||||||||||| Sbjct 10617 CGGGCGACTAAGCGCGCGAGCAATGTCGGTCATGTTTGCGATGACGGTCTTGATGCCGTT 10676 Query 34554 GCCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGC 34613 ||||| ||||| | ||||| || | | ||||| ||||||||||||||| |||| Sbjct 10677 TCCCTTGCCTTCAATCTTGGTCTGGAGGAGGGGCATCTTGTAGCGGTAGAACTTGTCCTG 10736 Query 34614 CACATTGCGGTTAACGTTCACAGTCCCCAT 34643 |||| | |||||| |||||| |||| Sbjct 10737 GACATCTCTACGAACGTTAACAGTCGCCAT 10766 >seq6374 Length=30453 Score = 100 bits (110), Expect = 2e-16 Identities = 112/150 (75%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 34494 CGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTT 34553 ||| || | |||||| || || |||| |||||| ||||||| |||||||||||||| Sbjct 10617 CGGGCGACTAAGCGCGCGAGCAATGTCGGTCATGTTTGCGATGACGGTCTTGATGCCGTT 10676 Query 34554 GCCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGC 34613 ||||| ||||| | ||||| || | | ||||| ||||||||||||||| |||| Sbjct 10677 TCCCTTGCCTTCAATCTTGGTCTGGAGGAGGGGCATCTTGTAGCGGTAGAACTTGTCCTG 10736 Query 34614 CACATTGCGGTTAACGTTCACAGTCCCCAT 34643 |||| | |||||| |||||| |||| Sbjct 10737 GACATCTCTACGAACGTTAACAGTCGCCAT 10766 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412797297580865