Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689965.1_202016-07-20] 8,805 sequences; 43,736,635 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq4834 174 2e-37 seq5159 147 3e-29 seq248 136 6e-26 seq1920 129 9e-24 seq8426 107 3e-17 seq6407 107 3e-17 seq3086 100 5e-15 >seq4834 Length=10274 Score = 174 bits (192), Expect = 2e-37 Identities = 219/300 (73%), Gaps = 3/300 (1%) Strand=Plus/Minus Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399 ||| ||||| || ||||| | |||||| ||| ||| ||||||||||| || ||||| Sbjct 9278 ACCCTCGTCTCGGCTGATGAGCTCGTTGGAGAAGGTGAGACCGGGCATGAGACCACGCTT 9219 Query 794400 CTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 794459 ||||||||| ||||||| |||| ||| ||||| ||||| ||||| ||||| ||||| Sbjct 9218 CTTGAGCCAGAAGATGGAGGCGAAAGAGCCGGAGAAGAAGATACCCTCTACGGCAGCAAA 9159 Query 794460 GCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCA 794519 | | || || ||||||||||| ||| | | || | ||||||||| || ||||| Sbjct 9158 GGCAACCAGGCGCTCGGCAAAGGTG---GAGTCTTCGTCGTTGATCCAGCGCAGGGCCCA 9102 Query 794520 CTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCTC 794579 ||| ||||||| | | || ||| | || || || ||| ||||||| || || Sbjct 9101 CTCGGCCTTTTGCTTGACGACGGGAATGGTCTCCATCGCGTCGAAGAGGTACTCGCGCTG 9042 Query 794580 GACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTC 794639 | ||||| | ||| |||||||||||||| ||||| ||||| ||||| ||||| || Sbjct 9041 TGCGGGGTCGCGAATGTATGTGTCGATGAGGAGGGAGTATGTCTCGGAGTGAATGTTCTC 8982 Score = 111 bits (122), Expect = 2e-18 Identities = 151/210 (72%), Gaps = 3/210 (1%) Strand=Plus/Minus Query 796150 GCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCG 796209 ||||| | | | |||||||| |||| || || | |||||||| |||||||| Sbjct 8874 GCCTCTGCTGCCTGGACCTCTGAGCTGAACCGCTCGACGAGGTTCTCGTTGACGATGCCA 8815 Query 796210 TCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAGC 796269 || |||||||| || ||||||||||| |||| ||||| ||||||| |||| | | | Sbjct 8814 TCTGACGCGGCGAAGAATGCGAGGACGTGGCTGATGAAGTGTCGCTCGTTGTCGTTCAAC 8755 Query 796270 ---GAGACCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGAG 796326 | |||||| | | |||| | ||||||| ||||||||| ||||| || || Sbjct 8754 TTGTTGTCCCAGTCGTGCATGTCCTTGGAAAGGTCGATCTCCTCGGCCGTCCAGAACGAT 8695 Query 796327 GCCTCGGCCTTTTTGTACATCTCCCATATC 796356 ||||| ||||| |||||||| | ||| ||| Sbjct 8694 GCCTCTGCCTTCTTGTACATTTGCCAGATC 8665 Score = 93.3 bits (102), Expect = 7e-13 Identities = 110/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 793929 AAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTC 793988 || ||||| |||||||| | |||||||| |||||| | ||| || || | | Sbjct 9562 AAGAAGTTTGTCTTGCCTTGCAGCGAGATGTTCTCCATGAAGTCGAAGGGATTTGTGGCG 9503 Query 793989 AGGTAGTGCTTCTCGCACCCGAGCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTAC 794048 ||||||||||||| |||||| | | ||||| ||||| ||||| ||||| |||||| Sbjct 9502 TTGTAGTGCTTCTCGTTCCCGAGGGCTACCAGCAGTCGGTCAGCGACAAATTCGATGTAC 9443 Query 794049 TGGCACATGAGGGCGGCGTTCATGCCGAT 794077 |||| ||| || |||||||||||||| Sbjct 9442 TGGCTCATAAGTCGTGCGTTCATGCCGAT 9414 >seq5159 Length=21689 Score = 147 bits (162), Expect = 3e-29 Identities = 173/234 (74%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 |||||||||||||| |||||| ||||| |||| ||||||| ||| ||||| ||| | | Sbjct 5663 GTACTTGGTGACGGACTTGGTTCCCTCAGAGATGGCGTGCTTGGAGAGTTCACCGGGGAG 5722 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCG 1485590 ||| || || || ||||| ||||||||||||| ||| || |||||| | Sbjct 5723 GATAAGTCGGACAGCGGTTTGGATCTCGCGGGCAGAGATGGTCGACTTCTTGTTGTAGGA 5782 Query 1485591 CGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCAT 1485650 || || | |||||||| ||||||| |||| ||||| | ||| || ||||||| Sbjct 5783 TGCAAGCTTGGAGGCCTCGGATGCGATGCGCTCGAAGATGTCTTGGACGAAGGAGTTCAG 5842 Query 1485651 GATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704 ||| | ||| | ||||| ||||| || ||||||||||||||||||||| || Sbjct 5843 GATGGCCATAGCCTTGTTTGAGATACCAGTGTCGGGGTGCACCTGCTTGAGGAC 5896 >seq248 Length=52618 Score = 136 bits (150), Expect = 6e-26 Identities = 185/258 (72%), Gaps = 0/258 (0%) Strand=Plus/Minus Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599 ||| ||||| ||||| || |||| ||| |||||||| ||||| ||||| | ||||| || Sbjct 27625 CTGATCGACGTAGCGAGCGGTGTTGTTGAAGACGCGAAGCATAGGCACGATACCGTTAGA 27566 Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659 | ||||| || || || | ||| | ||| | | || | ||| | | ||| Sbjct 27565 GACACCGTTAGTTCCGGCAATGTATGAGCCGGTACCACGGATGCAGTGGATGTTGAGGCC 27506 Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719 |||||| || |||| |||| ||| | ||||| | || || || ||||||||||| || Sbjct 27505 GATGCCACCAGCCGTCTTGCTGATCATGGCGCAGGTCTTGAGAGTGTCGTAGATGCCGTC 27446 Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779 |||||||||| |||||||| | ||| |||||||| || |||| ||| | || || Sbjct 27445 GATCGAGTCGTCCTTCATGGTGACCAGGAAGCACGATGACATTTGAGGGTTGGGTGTACC 27386 Query 2073780 GGCATTGAAGAGCGTGGG 2073797 || |||||||| ||||| Sbjct 27385 AGCGTTGAAGAGGGTGGG 27368 Score = 104 bits (114), Expect = 4e-16 Identities = 283/435 (65%), Gaps = 6/435 (1%) Strand=Plus/Minus Query 2071581 GACCTCGGTGCACAGGTTGGCCGACATCGTGGTGCCCAGGTTCTGCTGGTTGCTGGTCAG 2071640 || ||| ||||||||||||| || | ||||||| ||||||| ||||| | | Sbjct 28057 GATCTCCGTGCACAGGTTGGAGCACTTGATGGTGCCGAGGTTCTTTTGGTTCGACTTGCG 27998 Query 2071641 GTTGACGGCGTCCTTGTGCAGCATGTAGGGCGCACCCGTCTCGATCTGCGCCGTGACGAT 2071700 |||| | |||||||||| |||||| | || || ||||| |||| ||| || | Sbjct 27997 GTTGGCAGCGTCCTTGTAAAGCATGAAAGGGTTGCCAGTCTCCGTCTGAGCCTCGAGAAC 27938 Query 2071701 GGCCGACCAAA--TTTGGCGCGCGGGCACCGAGGTCCTCGCGCGGCCCTNNNNNNNNNNN 2071758 ||| |||||| ||| | || | | || | || || |||| Sbjct 27937 GGCGTACCAAAGCTTTTGGGCCTTGACGGTTCGG--CGAGCACGACCCTCACGCTCGTAC 27880 Query 2071759 NNNNNNNAGAGGGCGTCAAAGGCGGCGCCGTGGCACTCGTGCAGGCCGGGCGCCTCGGAC 2071818 |||| || || || || |||||| | || || ||||| ||| | Sbjct 27879 TTCTCGTAGAGAGCCTCGAACTCGTCGCCGTAGACATCAGCGAGACCGGGGCACTCAGCG 27820 Query 2071819 GGGCAAAAGAGCGACCAGTCGCCGC-CAGTCACCACGCGGCGCATAAACAGGTCGCACGT 2071877 ||||| | |||||||| || ||| | || | || || ||| |||| ||| | Sbjct 27819 GGGCACATCAGCGACCACTCTCCGTTCTGTT-CGACTCGCTTCATGAACAAGTCAGGGAT 27761 Query 2071878 CCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTCAG 2071937 ||| ||| |||| ||||| || || || ||| ||||||||||||||||||||| | || Sbjct 27760 CCAAAGGGCGTAGAAGAGCTCACGGGCTCGGACCTCCTCCTTGCCGTGGTTCTTCCTGAG 27701 Query 2071938 GTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCTT 2071997 |||||| | |||| || ||| | |||||| ||||| | |||| ||| ||||| || Sbjct 27700 GTCGAGGAACTCGAAGACGTCAGAGTGCCAGGGCTCAATGTAGATGGCGAAGGCACCTGG 27641 Query 2071998 GCGCTTGCCGCCGCC 2072012 |||||| ||| || Sbjct 27640 ACGCTTGTTGCCACC 27626 >seq1920 Length=30349 Score = 129 bits (142), Expect = 9e-24 Identities = 171/235 (73%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 |||||||||||| | |||||| ||||| |||| ||||||| ||| ||||| ||| | | Sbjct 11092 GTACTTGGTGACCGACTTGGTCCCCTCCGAGATGGCGTGCTTGGAGAGTTCACCGGGGAG 11151 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCG 1485590 ||| || || ||||| || ||||||||||| | | ||| ||| | |||||| || | Sbjct 11152 GATGAGTCGGACGGCTGTTTGGATCTCGCGTGCGGAGATGGTGCTCTTCTTGTT-GTATG 11210 Query 1485591 -CGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 || || | || |||| ||||||| |||| ||||| | || || ||||| | Sbjct 11211 ATGCGAGTTTGGAAGCTTCGGATGCGATGCGCTCGAAGATGTCTTGTACGAAGGAGTTGA 11270 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704 ||| | ||| | ||||||||||| || ||||||||| || |||||||| || Sbjct 11271 GGATGGCCATGGCCTTGTTGGAGATACCAGTGTCGGGGTGGACTTGCTTGAGGAC 11325 >seq8426 Length=20327 Score = 107 bits (118), Expect = 3e-17 Identities = 110/141 (78%), Gaps = 2/141 (1%) Strand=Plus/Plus Query 431022 CCCGAGAGCCGCGGCTTTGTGCGCAACTCGTACGAGCGCGGCCTCAACTCGCGCGAGATG 431081 |||||||| || ||||||||| |||||||| ||| || |||| | | ||| | Sbjct 3238 CCCGAGAGTCGAGGCTTTGTGGAGAACTCGTATCTGCGAGGTCTCACGGCACAGGAGTTC 3297 Query 431082 TTTCTGCACATGATCGGCGGG-CGCGAGGGTCTCGTCGACACGGCCGTCAAGACGGCCGA 431140 || | ||| || |||||| |||||||||||| |||||||||| |||||||||||||| Sbjct 3298 TTCTTCCACGCCAT-GGCGGGTCGCGAGGGTCTCATCGACACGGCTGTCAAGACGGCCGA 3356 Query 431141 GACGGGCTACATCCAGCGTCG 431161 |||||| ||||| ||||| || Sbjct 3357 GACGGGATACATTCAGCGACG 3377 >seq6407 Length=15639 Score = 107 bits (118), Expect = 3e-17 Identities = 110/141 (78%), Gaps = 2/141 (1%) Strand=Plus/Plus Query 431022 CCCGAGAGCCGCGGCTTTGTGCGCAACTCGTACGAGCGCGGCCTCAACTCGCGCGAGATG 431081 |||||||| || ||||||||| |||||||| ||| || |||| | | ||| | Sbjct 3238 CCCGAGAGTCGAGGCTTTGTGGAGAACTCGTATCTGCGAGGTCTCACGGCACAGGAGTTC 3297 Query 431082 TTTCTGCACATGATCGGCGGG-CGCGAGGGTCTCGTCGACACGGCCGTCAAGACGGCCGA 431140 || | ||| || |||||| |||||||||||| |||||||||| |||||||||||||| Sbjct 3298 TTCTTCCACGCCAT-GGCGGGTCGCGAGGGTCTCATCGACACGGCTGTCAAGACGGCCGA 3356 Query 431141 GACGGGCTACATCCAGCGTCG 431161 |||||| ||||| ||||| || Sbjct 3357 GACGGGATACATTCAGCGACG 3377 >seq3086 Length=55404 Score = 100 bits (110), Expect = 5e-15 Identities = 152/213 (71%), Gaps = 5/213 (2%) Strand=Plus/Minus Query 2411386 TCAATCTTGGAGGCGGCCTCGCTGGCGCTCATCTTGCCGTCCTTGGTGAGGCCCGGCACC 2411445 |||||||||||| | || ||| || |||||||||| | |||| || || || ||| Sbjct 27180 TCAATCTTGGAGTCCGCATCGGAGGAGCTCATCTTGGAGCCCTTA---AGACCGGGTACC 27124 Query 2411446 AGCGGGTTGAGCAGGTGGATGCGCTTGCGGTAGCCCAGCGCCGGCAGGTGGTCGCGCGCA 2411505 | | ||| | || ||| |||||| |||||| ||| |||||| || ||| Sbjct 27123 ATGGCGTTCATGAGATGGGCGCGCTTTGCGTAGCCGAGCTTAGGCAGGACCTCCTCGGCA 27064 Query 2411506 AAGGCAAAGATCTTGCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACGTCGAGGTGCTGC 2411565 | | | ||||| || ||||||||| || || || ||| ||||||| |||||| |||| Sbjct 27063 AGGACGAAGATTTTTCGCTGGTCGACACCTCCGAATTGGAAGTCGACGCCGAGGTACTGC 27004 Query 2411566 TCGTCGAGGGCCTGCATGAGC-GGGTAGACGAG 2411597 |||||||| || || | || | ||||||| ||| Sbjct 27003 TCGTCGAGCGCTTGGA-GACCGGGGTAGATGAG 26972 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7915309771990395