Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tilletia_20indica_20[genbank_20GCA_5F001689965.1_202016-07-20]
8,805 sequences; 43,736,635 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq2372 100 6e-16
seq3785 98.7 2e-15
>seq2372
Length=9363
Score = 100 bits (110), Expect = 6e-16
Identities = 154/217 (71%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654
||| || || || || || || || ||||| || || || || ||||| || | | ||
Sbjct 216 ACGGAGGACCAAATGAAGTGTGGACTCTTTTTGGATGTTGTAGTCAGAAAGGGTGCGGCC 157
Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714
|| || | || || || || ||||| | || |||||||| ||||| || || |||||
Sbjct 156 ATCCTCCAACTGCTTGCCCGCGAAGATCAATCGCTGTTGATCCGGAGGAATACCCTCCTT 97
Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGG-TTCTACTTCCAAAGTTA 82773
||||||||||| | || || || || || || || | ||| || ||||| | || |
Sbjct 96 GTCTTGAATCTTGGTCTTGACGTTGTCGATAGTGTC-TGAGGACTCGACTTCGAGTGTGA 38
Query 82774 TCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
| |||||||| || | ||||| || || ||||||||
Sbjct 37 TTGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 1
>seq3785
Length=5141
Score = 98.7 bits (108), Expect = 2e-15
Identities = 152/217 (70%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| || | || || || || ||||||| || || || ||||| || || || || |
Sbjct 564 TACCACCACGCAGGCGGAGGACCAAGTGCAATGTGGACTCCTTCTGGATGTTGTAGTCCG 623
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| | ||| ||||| || || || || || |||||||| || | || || || ||||
Sbjct 624 ACAATGTTCGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCCGGAG 683
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || || ||||||||||| ||||||| || || || ||||| || || | || |
Sbjct 684 GAATGCCCTCCTTATCTTGGATCTTTGTCTTGACGTTGTCAATGGTGTCCGAGGACTCAA 743
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTAC 82798
| || | || || |||||||| |||| ||||| ||
Sbjct 744 CCTCGAGGGTGATGGTCTTGCCAGTCAGAGTCTTGAC 780
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981716436084895
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |