Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689965.1_202016-07-20] 8,805 sequences; 43,736,635 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq3785 105 4e-18 seq2372 93.3 3e-14 >seq3785 Length=5141 Score = 105 bits (116), Expect = 4e-18 Identities = 163/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | || ||| | ||||| || || || ||| || || ||||||||||| || Sbjct 337 ACCACCGCGCAGACGAAGAACCAAGTGAAGCGTTGACTCCTTCTGGATGTTGTAATCAGA 396 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || ||||| | || ||||| || || ||||| || || | |||||||| || | || Sbjct 397 AAGAGTGCGGCCATCCTCCAACTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCCGGGGG 456 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||| || ||||| || ||| || | || | ||| | |||||| |||||||| Sbjct 457 GATACCCTCCTTGTCCTGGATCTTC-GTCTTCACGTTGTCGATGGTGTCTGATGATTCCA 515 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | |||| ||||| || || || || | || || || |||||||||||| Sbjct 516 CCTCAAGAGTGATGGTCTTGCCGGTGAGAGTCTTCACGAAGATCTGCATA 565 Score = 87.8 bits (96), Expect = 1e-12 Identities = 144/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | || ||| | ||||| || || || ||| || || ||||||||||| || Sbjct 93 ACCACCGCGCAGACGAAGAACCAAGTGAAGCGTTGACTCCTTCTGGATGTTGTAATCAGA 152 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || ||||| | || ||||| || || ||||| || || | |||||||| || | || Sbjct 153 AAGAGTGCGGCCATCCTCCAACTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCCGGGGG 212 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||| || ||||| || ||| || | || | ||| | |||||| |||||||| Sbjct 213 GATACCCTCCTTGTCCTGGATCTTC-GTCTTCACGTTGTCGATGGTGTCTGATGATTCCA 271 Query 33701 CGTCAACCGTGATCGTTTTACCTGT 33725 | |||| ||||| || || || || Sbjct 272 CCTCAAGAGTGATGGTCTTGCCGGT 296 Score = 87.8 bits (96), Expect = 1e-12 Identities = 159/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| | ||||| || || ||| ||| || || |||||||| ||||| Sbjct 4971 ACCACCGCGGAGACGGAGAACCAAGTGAAGTGTGGACTCCTTCTGGATGTTGTAGTCGGA 4912 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||| || || |||| || | || |||||||| || || | |||||||| || | || Sbjct 4911 GAGGGTTCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATAAGGCGCTGCTGGTCCGGAGG 4852 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | || || ||||| || || || | |||| ||| | ||||| |||||| | Sbjct 4851 GATGCCCTCCTTGTCTTGGATCTTG-GTCTTGACATTGTCGATCGTGTCTGATGATTCAA 4793 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | ||||| || || || || | || || || |||||||||||| Sbjct 4792 CTTCGAGTGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATA 4743 >seq2372 Length=9363 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | | ||| | |||||||| || ||| ||||||||| |||||||| || || Sbjct 227 CCACCGCGGAGACGGAGGACCAAATGAAGTGTGGACTCTTTTTGGATGTTGTAGTCAGAA 168 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| | || ||||| || || || || || ||||| ||||| ||||| | || Sbjct 167 AGGGTGCGGCCATCCTCCAACTGCTTGCCCGCGAAGATCAATCGCTGTTGATCCGGAGGA 108 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||| || ||||| ||| || || | || | ||| | ||||| || || || Sbjct 107 ATACCCTCCTTGTCTTGAATCTTG-GTCTTGACGTTGTCGATAGTGTCTGAGGACTCGAC 49 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | ||||| || || || || | || || || ||||||||||| Sbjct 48 TTCGAGTGTGATTGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328668726465600