Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689965.1_202016-07-20] 8,805 sequences; 43,736,635 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq4834 163 4e-34 seq5159 104 3e-16 seq1920 95.1 2e-13 >seq4834 Length=10274 Score = 163 bits (180), Expect = 4e-34 Identities = 219/297 (74%), Gaps = 6/297 (2%) Strand=Plus/Plus Query 1456015 GAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCGGTC 1456074 || ||||| ||||| || || ||||| ||||| |||||||| ||| | ||||| | Sbjct 8982 GAGAACATTCACTCCGAGACATACTCCCTCCTCATCGACACATACATTCGCGACCCCGCA 9041 Query 1456075 GAGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCC-GTCGGTGAGGAAAAAGGCCGA 1456133 || || ||||||| ||| || || || | || |||| | | | |||||||||| Sbjct 9042 CAGCGCGAGTACCTCTTCGACGCGATGGAGACCATTCCCGTCG-TCAAGCAAAAGGCCGA 9100 Query 1456134 CTGGGCGATGAAGTGGATCAACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCGTCGGC 1456193 ||||| || ||||||||| | || | | || || |||||||||||| || || | | Sbjct 9101 GTGGGCCCTGCGCTGGATCAACGACGAAGAC-TCCAC-CTTTGCCGAGCGCCTGGTTGCC 9158 Query 1456194 TTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTCAAG 1456252 ||||| || || ||||| ||||| ||||| ||| |||| | ||||||| ||||||||| Sbjct 9159 TTTGCTGCCGTAGAGGGTATCTTCTTCTCCGGCTCTTTCGCCTCCATCTTCTGGCTCAAG 9218 Query 1456253 AAGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAACGAATTTATCAGTCGCGACGA 1456309 ||||| || ||||||||||||| || ||| |||||| | ||||| || ||||| Sbjct 9219 AAGCGTGGTCTCATGCCCGGTC-TCACCTTCTCCAACGAGCTCATCAGCCGAGACGA 9274 Score = 122 bits (134), Expect = 1e-21 Identities = 171/237 (72%), Gaps = 5/237 (2%) Strand=Plus/Plus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| |||||||| || ||||| ||||| || || ||||| ||||||||| |||||| Sbjct 8665 GATCTGGCAAATGTAC-AAGAAGGCAGAGGCATCGTTCTGGACGGCCGAGGAGATCGACC 8723 Query 1455835 TCGGCGCCGACACGGTCCACTGGGTGTC---GCTGAGCGACGACGAGCGCCATTTCATCA 1455891 | | |||| | | |||||| | ||| |||| ||||||| || ||||||| Sbjct 8724 TTTCCAAGGACATGCACGACTGGGACAACAAGTTGAACGACAACGAGCGACACTTCATCA 8783 Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951 ||||||||||| || || |||||| ||||||||||| ||||||||| | || Sbjct 8784 GCCACGTCCTCGCATTCTT-CGCCGCGTCAGATGGCATCGTCAACGAGAACCTCGTCGAG 8842 Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATC 1456008 || || | ||||||||| ||||||| || | || ||||| ||||| ||| Sbjct 8843 CGGTTCAGCTCAGAGGTCCAGGCAGCAGAGGCTCGATGCTTCTACGGCTTCCAAATC 8899 Score = 87.8 bits (96), Expect = 3e-11 Identities = 113/152 (74%), Gaps = 3/152 (2%) Strand=Plus/Plus Query 1456586 ATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCCTGC 1456645 |||||||||||||| || || ||| |||||||||| |||||| ||||| ||||| |||| Sbjct 9414 ATCGGCATGAACGC-ACGACTTATGAGCCAGTACATCGAATTT-GTCGCTGACCGACTGC 9471 Query 1456646 TCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATGGAG 1456705 | | || ||||| || ||||||||||| | | || || ||| | |||||| Sbjct 9472 TGGTAGCCCTCGGGAACG-AGAAGCACTACAACGCCACAAATCCCTTCGACTTCATGGAG 9530 Query 1456706 TTGATCTCGCTCGAGGGCAAGACCAACTTTTT 1456737 |||||||| | |||||||| ||||| || Sbjct 9531 AACATCTCGCTGCAAGGCAAGACAAACTTCTT 9562 >seq5159 Length=21689 Score = 104 bits (114), Expect = 3e-16 Identities = 163/232 (70%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 |||||| || |||||||||||||||||| || | | ||| || |||||| | Sbjct 5905 ATCTACCGTGTCCTCAAGCAGGTGCACCCCGACACTGGT-----ATC-TCAAACAAGGCT 5852 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||| | ||| ||||||| || ||| | ||||| |||| ||||||| |||||||| Sbjct 5851 ATGGCCATCCTGAACTCCTTCGTCCAAGACATCTTCGAGCGCATCGCATCCGAGGCCTCC 5792 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090 || || || ||||||| || ||| | ||||||||||| ||||| || Sbjct 5791 AAGCTTGCATCCTACAACAAGAAGTCGACCATCTCTGCCCGCGAGATCCAAACCGCTGTC 5732 Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || || ||| | | ||| ||||| ||| ||||||| |||| ||||| |||| Sbjct 5731 CGACTTATCCTCCCCGGTGAACTCTCCAAGCACGCCATCTCTGAGGGAACCA 5680 >seq1920 Length=30349 Score = 95.1 bits (104), Expect = 2e-13 Identities = 161/232 (69%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 |||||| || |||||||| || |||||| || | | ||| ||||||||| || Sbjct 11334 ATCTACCGTGTCCTCAAGCAAGTCCACCCCGACACTGGT-----ATC-TCCAACAAGGCC 11281 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||| | ||| | ||||| || || | ||||| |||| ||||||| |||| || Sbjct 11280 ATGGCCATCCTCAACTCCTTCGTACAAGACATCTTCGAGCGCATCGCATCCGAAGCTTCC 11221 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090 || || | ||||||| | ||| ||| | | ||||||||||| || ||||| Sbjct 11220 AAACTCGCATCATACAACAAGAAGAGCACCATCTCCGCACGCGAGATCCAAACAGCCGTC 11161 Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || || ||| | | ||| ||||| ||| ||||||| |||| ||||| |||| Sbjct 11160 CGACTCATCCTCCCCGGTGAACTCTCCAAGCACGCCATCTCGGAGGGGACCA 11109 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7176961941566410