Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689965.1_202016-07-20] 8,805 sequences; 43,736,635 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq6382 116 3e-21 seq3785 107 2e-18 seq6491 89.7 5e-13 seq7298 86.0 6e-12 >seq6382 Length=53231 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | |||||||| | || |||||||||||||||||| || | Sbjct 362 CCACCACGGAGACGGAGGACCAAATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCCGAA 303 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||| || | || || |||||||| ||||| || ||||| ||||||||||||| || Sbjct 302 AGGGTGCGGCCATCTTCGAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCCGGGGGG 243 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | || |||||||||| ||||| ||| | | | | | ||||| ||||||||| Sbjct 242 ATGCCCTCCTTGTCCTGAATCTTCGTCTTGACATTGTCGATGGTGTCTGATGATTCCACC 183 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | ||||| || || || || | || || || || |||||||| Sbjct 182 TCGAGTGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAAATCTGCAT 136 Score = 84.2 bits (92), Expect = 2e-11 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || ||||||||||||| | ||| || | || |||| |||||| || || || Sbjct 99 CTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCATCCTCCAACTGCTTGCCGGCGAA 40 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTC 35643 ||||| || || ||||||| ||||| || ||||||||| Sbjct 39 GATCAATCGTTGTTGGTCCGGAGGAATGCCCTCCTTGTC 1 >seq3785 Length=5141 Score = 107 bits (118), Expect = 2e-18 Identities = 155/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | ||||| || || || |||||| || |||||||| || | | Sbjct 566 CCACCACGCAGGCGGAGGACCAAGTGCAATGTGGACTCCTTCTGGATGTTGTAGTCCGAC 625 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || ||||| |||| || |||||||| || ||||| || | ||||||||||||| |||| Sbjct 626 AATGTTCGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCCGGAGGA 685 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688 | || |||||| || ||||||| ||| | |||| | | ||||| || || || Sbjct 686 ATGCCCTCCTTATCTTGGATCTTTGTCTTGA-CGTTGTCAATGGTGTCCGAGGACTCAAC 744 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 ||| | ||||| || || || |||| ||| || || Sbjct 745 CTCGAGGGTGATGGTCTTGCCAGTCAGAGTCTTGAC 780 Score = 105 bits (116), Expect = 6e-18 Identities = 151/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 35528 ACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCC 35587 ||||| || | ||| |||||| || ||||||||||| | | || || | || ||| Sbjct 356 ACCAAGTGAAGCGTTGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCCTCC 415 Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647 | |||||| || || || || | ||||||||||||| || | | |||||||||| | Sbjct 416 AACTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGG 475 Query 35648 ATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTT 35706 ||||| ||||| |||| | | ||||| ||||||||||| | ||||| || || Sbjct 476 ATCTTCGTCTTCA-CGTTGTCGATGGTGTCTGATGATTCCACCTCAAGAGTGATGGTCTT 534 Query 35707 ACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || || | ||| ||||| || |||||||| Sbjct 535 GCCGGTGAGAGTCTTCACGAAGATCTGCAT 564 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| |||| | |||||| |||| || |||||||| || || || Sbjct 4935 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCCTCGAGCTGCTTTCCGGCGAA 4876 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||||| ||| | || ||||||||| |||||| ||| | | | Sbjct 4875 GATAAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCTTGGATCTTGGTCTTGACATT 4816 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||| ||||| || || | ||||| || || || || | || || || Sbjct 4815 GTCGATCGTGTCTGATGATTCAACTTCGAGTGTGATGGTCTTGCCGGTGAGGGTCTTGAC 4756 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 4755 GAAGATCTGCAT 4744 Score = 100 bits (110), Expect = 3e-16 Identities = 130/180 (72%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||||||||| ||||||||||||| | ||| || |||| || || ||||| || || || Sbjct 4707 CTCCTTTTGGATGTTGTAATCGGAAAGGGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAA 4648 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||||| ||||| || ||||||||| |||||| ||| | | | Sbjct 4647 GATGAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCTTGGATCTTGGTCTTGACATT 4588 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| || || ||||| | ||||| || || || |||| ||| || || Sbjct 4587 GTCAATGGTGTCTGAAGACTCAACCTCAAGGGTGATGGTCTTGCCAGTCAGAGTCTTAAC 4528 Score = 86.0 bits (94), Expect = 6e-12 Identities = 132/186 (71%), Gaps = 2/186 (1%) Strand=Plus/Plus Query 35528 ACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCC 35587 ||||| || | ||| |||||| || ||||||||||| | | || || | || ||| Sbjct 112 ACCAAGTGAAGCGTTGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCCTCC 171 Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647 | |||||| || || || || | ||||||||||||| || | | |||||||||| | Sbjct 172 AACTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGG 231 Query 35648 ATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTT 35706 ||||| ||||| |||| | | ||||| ||||||||||| | ||||| || || Sbjct 232 ATCTTCGTCTTCA-CGTTGTCGATGGTGTCTGATGATTCCACCTCAAGAGTGATGGTCTT 290 Query 35707 ACCCGT 35712 || || Sbjct 291 GCCGGT 296 >seq6491 Length=17318 Score = 89.7 bits (98), Expect = 5e-13 Identities = 139/199 (70%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || | | || || |||| || |||||||| || || || Sbjct 4962 CTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAA 5021 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||||| || | | ||||||||| ||| || ||| | | Sbjct 5022 GATGAGTCGCTGCTGGTCCGGGGGGATACCTTCCTTGTCCTGGATTTTGGTCTTGACGGC 5081 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | | |||| || |||||||| | ||||| || |||||||||| || || || Sbjct 5082 GTCGATGGAGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTACCCGTCAGGGTCTTGAC 5141 Query 35725 AAATATCTGCATTCTGTGC 35743 || |||||||| ||| || Sbjct 5142 GAAGATCTGCATGCTGGGC 5160 >seq7298 Length=1044 Score = 86.0 bits (94), Expect = 6e-12 Identities = 127/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || ||||||||||||| | ||| || |||| || || ||||| || || || Sbjct 369 CTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAA 428 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||| ||||||| ||| | || ||||||||| |||||| ||| | | | Sbjct 429 GATGAGACGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCTTGGATCTTGGTCTTGACATT 488 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| || || ||||| | ||||| || || || |||| ||| || || Sbjct 489 GTCGATGGTGTCCGAGGACTCAACCTCGAGGGTGATGGTCTTGCCAGTCAGAGTCTTAAC 548 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450743984529400