Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689965.1_202016-07-20] 8,805 sequences; 43,736,635 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq6382 141 9e-29 seq6491 123 3e-23 seq8729 116 4e-21 seq3785 113 5e-20 seq8196 109 6e-19 seq2372 105 7e-18 seq7298 98.7 1e-15 seq248 82.4 8e-11 >seq6382 Length=53231 Score = 141 bits (156), Expect = 9e-29 Identities = 153/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGT 134570 || || ||||| |||||||||||||||||||| || |||| | || |||||||| Sbjct 338 TGAAGAGTGGACTCCTTTTGAATGTTGTAGTCCGAAAGGGTGCGGCCATCTTCGAGCTGC 279 Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630 ||||| || || ||||| |||||||| || || || ||||| || || || ||||| || Sbjct 278 TTGCCCGCGAAGATCAATCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGAATCTTC 219 Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690 ||||| ||| | ||||| || |||||||| ||||| || ||||| || ||||| Sbjct 218 GTCTTGACATTGTCGATGGTGTCTGATGATTCCACCTCGAGTGTGATGGTCTTGCCGGTG 159 Query 134691 AAAGTTTTAACGAAAATTTGCAT 134713 | || || |||||||| ||||| Sbjct 158 AGGGTCTTGACGAAAATCTGCAT 136 >seq6491 Length=17318 Score = 123 bits (136), Expect = 3e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || | ||||||||| || || || ||||| || ||||||||||| || || | Sbjct 4936 AGGCGAAGCACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGG 4995 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 ||| |||||||| ||||| || || || | |||||||| || || || || ||||| Sbjct 4996 CCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGTCGCTGCTGGTCCGGGGGGATACCTTCC 5055 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || || ||||| ||||| ||||| | | |||||| || ||||| ||||| || Sbjct 5056 TTGTCCTGGATTTTGGTCTTGACGGCGTCGATGGAGTCGGAAGACTCCACCTCGAGGGTG 5115 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || ||||| || | || || ||||| || ||||| Sbjct 5116 ATAGTCTTACCCGTCAGGGTCTTGACGAAGATCTGCAT 5153 >seq8729 Length=33442 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | |||||||| || |||||||| ||||| |||||||||||| Sbjct 30280 CCGCCACGGAGACGGAGGACGAGGTGGAGGGTGGATTCTTTTTGGATGTTGTAGTCGGAT 30221 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || | ||| |||||||| ||||| || || || | ||| || || || || || Sbjct 30220 AGCGTTCGGCCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGTTGGTCTGGGGGG 30161 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || ||||| || || ||||| ||| | |||||||| || || || Sbjct 30160 ATGCCCTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCAATCGTGTCGGAGGACTCTACC 30101 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || ||||| || || || | || || ||||| || ||||| Sbjct 30100 TCGAGGGTGATGGTCTTGCCAGTAAGGGTCTTGACGAAGATCTGCAT 30054 >seq3785 Length=5141 Score = 113 bits (124), Expect = 5e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | || | ||| || ||||| ||||| || |||||||||||| Sbjct 4970 CCACCGCGGAGACGGAGAACCAAGTGAAGTGTGGACTCCTTCTGGATGTTGTAGTCGGAG 4911 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | ||| |||||||| || || || || || | |||||||| || || || Sbjct 4910 AGGGTTCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATAAGGCGCTGCTGGTCCGGAGGG 4851 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || ||||| || || ||||| ||| | ||||| || ||||| || Sbjct 4850 ATGCCCTCCTTGTCTTGGATCTTGGTCTTGACATTGTCGATCGTGTCTGATGATTCAACT 4791 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || ||||| || ||||| | || || ||||| || ||||| Sbjct 4790 TCGAGTGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 4744 Score = 100 bits (110), Expect = 3e-16 Identities = 136/187 (73%), Gaps = 2/187 (1%) Strand=Plus/Plus Query 134517 GTGGATTCCTTTTGAATGTTGTAGT-CGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCC 134575 ||||| ||||| || |||||||||| || ||| || | ||| |||||||| ||||| Sbjct 596 GTGGACTCCTTCTGGATGTTGTAGTCCGACAA-TGTTCGGCCGTCCTCGAGCTGCTTGCC 654 Query 134576 TGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTT 134635 ||||| || | |||||||| || || || ||||| || || ||||| || ||| || Sbjct 655 GGCAAAGATGAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTATCTTGGATCTTTGTCTT 714 Query 134636 GACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGT 134695 ||| ||| | ||||| || || || || ||||| || ||||| || || || | ||| Sbjct 715 GACGTTGTCAATGGTGTCCGAGGACTCAACCTCGAGGGTGATGGTCTTGCCAGTCAGAGT 774 Query 134696 TTTAACG 134702 || ||| Sbjct 775 CTTGACG 781 >seq8196 Length=29145 Score = 109 bits (120), Expect = 6e-19 Identities = 140/193 (73%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569 ||| || ||||| ||||| || |||||||||||| | ||| || ||| |||||||| Sbjct 8791 GTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGACCGTCCTCGAGCTG 8732 Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629 ||||| || || || | |||||| || || || || || ||||| || || || || || Sbjct 8731 CTTGCCGGCGAAGATGAGACGCTGTTGGTCCGGGGGAATACCTTCCTTGTCCTGGATCTT 8672 Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689 ||||| ||||| | | ||||||||| || || ||||| || || || || ||||| Sbjct 8671 GGTCTTGACGGCGTCGATGGAGTCGGACGACTCGACCTCGAGGGTGATCGTCTTGCCGGT 8612 Query 134690 TAAAGTTTTAACG 134702 | || || ||| Sbjct 8611 GAGGGTCTTGACG 8599 >seq2372 Length=9363 Score = 105 bits (116), Expect = 7e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGT 134570 || || ||||| || ||||| ||||||||||| || |||| | || || | ||| Sbjct 203 TGAAGTGTGGACTCTTTTTGGATGTTGTAGTCAGAAAGGGTGCGGCCATCCTCCAACTGC 144 Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630 ||||| || || ||||| ||||| ||||| || || || || || || |||||||| || Sbjct 143 TTGCCCGCGAAGATCAATCGCTGTTGATCCGGAGGAATACCCTCCTTGTCTTGAATCTTG 84 Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690 ||||| ||| | ||||| || || || || ||||| || || || || ||||| Sbjct 83 GTCTTGACGTTGTCGATAGTGTCTGAGGACTCGACTTCGAGTGTGATTGTCTTGCCGGTG 24 Query 134691 AAAGTTTTAACGAAAATTTGCAT 134713 | || || ||||| || ||||| Sbjct 23 AGGGTCTTGACGAAGATCTGCAT 1 >seq7298 Length=1044 Score = 98.7 bits (108), Expect = 1e-15 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 134517 GTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCT 134576 ||||| ||||| || ||||||||||| | ||| | ||| || ||||| ||||| Sbjct 136 GTGGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTACGTCCGTCTTCAAGCTGCTTGCCG 195 Query 134577 GCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTG 134636 || || ||||| || || || || || || ||||| || || || ||||| || ||| Sbjct 196 GCGAAGATCAATCGTTGTTGGTCCGGAGGGATGCCCTCCTTGTCCTGAATCTTGGTCTTG 255 Query 134637 ACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTT 134696 || ||| | |||||||| || || || ||||| || || || || ||||| | || Sbjct 256 ACGTTGTCGATAGTGTCGGAGGACTCAACTTCGAGTGTGATTGTCTTGCCGGTGAGGGTC 315 Query 134697 TTAACGAAAATTTGCAT 134713 || ||||| || ||||| Sbjct 316 TTGACGAAGATCTGCAT 332 >seq248 Length=52618 Score = 82.4 bits (90), Expect = 8e-11 Identities = 295/453 (65%), Gaps = 15/453 (3%) Strand=Plus/Plus Query 7537 ATCAACGGCGAATGCGCGGAACGAATTCAACACATGCTGTTGCGCGTGGCGGTGGGCATT 7596 ||||||||| | ||| || || ||||||||||| |||| || || || ||||| Sbjct 27236 ATCAACGGCAAGGTCGCCGAGCGCCCCCAACACATGCTCATGCGAGTTGCTGTCGGCATC 27295 Query 7597 CACGGCGAAGACATTGACGCCGCCTTGGAAACGTACCAAATGATGTCTTTGAAACAGTTT 7656 ||||| ||| |||| ||| | || || ||| | | ||||| ||| | || Sbjct 27296 CACGGGAGTTCCATCGACGAGGCCATCGACACTTACAACCTCATGTCGGAGAAGTACTTC 27355 Query 7657 ACGCACGCTTCGCCCACCATGTTTGCCGCGGGCACAAACGCGCCTCAATTGTCCTCGTGT 7716 || || || || |||||| | || ||| || ||| | |||||| |||| ||||| Sbjct 27356 ACCCATGCCTCCCCCACCCTCTTCAACGCTGGTACACCCAACCCTCAAATGTCATCGTGC 27415 Query 7717 TTTTTGCTAACCATGCGCGAAGACAGCATCGACGGCATTTACAACACGCTGCGCGA-TTG 7775 || || | |||||| || ||| ||||||||||| ||| |||| || | || || Sbjct 27416 TTCCTGGTCACCATGAAGGACGACTCGATCGACGGCATCTACGACACTCT-CAAGACCTG 27474 Query 7776 CGCCAATATTTCCAAATACGGC-GGCGGAATAGGTCTGAACGTAAACGACGTGCGCGCCA 7834 ||||| || | || ||||| || || || || || ||| | || | | || | | Sbjct 27475 CGCCATGATCAGC-AAGACGGCTGGTGGCATCGGCCTCAACATCCACTGCATCCGTGGTA 27533 Query 7835 ACGGTAGCCGCAT-CGTGTCC---ACCAACGGAAAAGCCAGCGGTTTAGAGCCCATGTTG 7890 ||| | ||| | | || || ||||| | | |||| | | ||| ||| | Sbjct 27534 CCGG----CTCATACATTGCCGGAACTAACGGTGTCTCTAACGGTATCGTGCCTATGCTT 27589 Query 7891 CGCGTGTTCAATAACGCGGTGCGACATGTAGACCAGGGGGG---AAAGCGCAAAGGCGCC 7947 ||||| ||||| ||| | | || | || || ||||| || ||||| ||| ||| Sbjct 27590 CGCGTCTTCAACAACACCGCTCGCTACGTCGATCAGGGTGGCAACAAGCGTCCAGGTGCC 27649 Query 7948 GCTGCCATCTATTTGGAGCCGTGGCACGCGGAC 7980 |||||||| | ||||| |||||| | ||| Sbjct 27650 TTCGCCATCTACATTGAGCCCTGGCACTCTGAC 27682 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505342774588600