Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689965.1_202016-07-20] 8,805 sequences; 43,736,635 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq4834 109 2e-18 seq248 86.0 2e-11 >seq4834 Length=10274 Score = 109 bits (120), Expect = 2e-18 Identities = 131/177 (74%), Gaps = 1/177 (1%) Strand=Plus/Plus Query 443696 CAGCTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAG 443755 || ||| | |||||| || || || ||||||| || || || | || || |||| Sbjct 9134 CACCTTTGCCGAGCGCCTGGTTGCCTTTGCTGCCGTAGAGGGTATCTTCTTCTCCGGCT- 9192 Query 443756 CTTTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTA 443815 |||| ||||||||||||||| | || |||||||| || |||| |||||| ||||| | Sbjct 9193 CTTTCGCCTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTCACCTTCTCCA 9252 Query 443816 ACGAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCTACA 443872 |||| || ||||| || ||||||||| |||| |||||| || || | |||| || Sbjct 9253 ACGAGCTCATCAGCCGAGACGAGGGTCTGCACACCGACTTTGCTTGCTTGCTCTTCA 9309 >seq248 Length=52618 Score = 86.0 bits (94), Expect = 2e-11 Identities = 80/102 (78%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 254981 CCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGGCGGCAAACGC 255040 || ||| | || || ||||||||| ||||||||||||||||| || ||| ||| || Sbjct 27581 CCTATGCTTCGCGTCTTCAACAACACCGCTCGCTACGTCGATCAGGGTGGCAACAAGCGT 27640 Query 255041 CCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGAC 255082 ||||| || ||| |||||||| | ||||| |||||| | ||| Sbjct 27641 CCAGGTGCCTTCGCCATCTACATTGAGCCCTGGCACTCTGAC 27682 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588156813363225