Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689965.1_202016-07-20] 8,805 sequences; 43,736,635 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq248 168 8e-37 seq4834 114 2e-20 >seq248 Length=52618 Score = 168 bits (186), Expect = 8e-37 Identities = 553/848 (65%), Gaps = 25/848 (3%) Strand=Plus/Minus Query 111251 TTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAA 111310 ||||| ||||| ||||||| | | ||||||| | || || || || | |||||| Sbjct 28095 TTGCAGACAGCGACCTCATCCGGAGCGCTGTACTCCATGATCTCCGTGCACAGGTTGGAG 28036 Query 111311 CTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGC 111370 | ||| || || || | ||||||||||| ||| |||| || |||||||| ||| Sbjct 28035 CACTTGATGGTGCCGAGGTTCTTTTGGTTCGACTTGCGGTTGGCAGCGTCCTTGTAAAGC 27976 Query 111371 ATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAA-CATCGGCGGC 111429 ||| | || | || ||||||||||| | | ||||| || | ||||| | | | | | Sbjct 27975 ATGAAAGGGTTGCCAGTCTCCGTCTGAGCCTCGAGAACGGCGTACCAAAGCTTTTGGGCC 27916 Query 111430 TGGTACAAT--GGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAAC 111487 | | || | |||| || || ||||| ||||||||| |||||| || || ||| Sbjct 27915 TTG-ACGGTTCGGCG--AGCACGACCCTCACGCTCGTACTTCTCGTAGAGAGCCTCGAAC 27859 Query 111488 TCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGA 111547 || || || | || | |||||| || || | || || | || ||||| | Sbjct 27858 TCGTCGCCGTAGACATCAGCGAGACCGGGGCACTCAGCGGGGCACATCAGCGACCACTCT 27799 Query 111548 CCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCT 111607 || | || || ||||||||||| | ||| || ||||| |||| | ||||| || Sbjct 27798 CCGTTCTGTTCGACTCGCTTCATGAACAAGTCAGGGATCCAAAGGGCGTAGAAGAGCTCA 27739 Query 111608 CTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCC 111667 | || |||| || | || ||||| | | || |||||||| | || || Sbjct 27738 CGGGCTCGGACCTCCTCCTTGCCGTGGTTCTTCCTGAGGTCGAGGAACTCGAAGACGTCA 27679 Query 111668 GCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC------CCAGCTTGA 111721 | |||||| ||||||| |||| |||| | || | ||||| ||| | ||| Sbjct 27678 GAGTGCCAGGGCTCAATGTAGATGGCGAAGGCACC---TGGACGCTTGTTGCCACCCTGA 27622 Query 111722 TTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGA 111781 | || ||||| || ||| ||| || ||||||||||| || | ||||| | || | Sbjct 27621 TCGACGTAGCGAGCGGTGTTGTTGAAGACGCGAAGCATAGGCACGATACCGTTAGAGACA 27562 Query 111782 CCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCAC--AT-CA-TGGATGTGCATCCC 111837 || || || || ||| | | | | | ||| || || ||||||| | || Sbjct 27561 CCGTTAGTTCCGGCAAT----GTATGAGCCGGTACCACGGATGCAGTGGATGTTGAGGCC 27506 Query 111838 AATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTT 111897 || || |||||| ||| ||| || || | | ||||| | ||||| |||| Sbjct 27505 GATGCCACCAGCCGTCTTGCTGATCATGGCGCAGGTCTTGAGAGTGTCGTAGATGCCGTC 27446 Query 111898 GATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACC 111957 ||| ||||| ||||| ||| || |||||||| ||||| || || | |||||||| Sbjct 27445 GATCGAGTCGTCCTTCATGGTGACCAGGAAGCACGATGACATTTGAGGGTTGGGTGTACC 27386 Query 111958 AGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTCGTATG 112016 ||| ||||||||||| || | || || |||| ||| | | ||||| || ||| | Sbjct 27385 AGCGTTGAAGAGGGTGGGGGAGGCATGGGTGAA-GTACTTCTCCGACATGAGGTTGTAAG 27327 Query 112017 TCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATGT 112076 | || | | | || ||| |||||||||||||| || || ||||||| ||||| Sbjct 27326 TGTCGATGGCCTCGTCGATGGAACTCCCGTGGATGCCGACAGCAACTCGCATGAGCATGT 27267 Query 112077 ACTGTGGG 112084 || ||| Sbjct 27266 GTTGGGGG 27259 >seq4834 Length=10274 Score = 114 bits (126), Expect = 2e-20 Identities = 128/170 (75%), Gaps = 1/170 (1%) Strand=Plus/Minus Query 122659 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCT 122718 ||||| || ||| |||||||| |||||| || || || || |||||| ||||| Sbjct 9295 GCAAAGTCGGTGTGCAGACCCTCGTCTCGGCTGATGAGCTCGTTGGAGAAGGTGAGACCG 9236 Query 122719 GGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATA 122778 ||||||||||| |||||||| | ||| | || | | ||| || ||||||||||||||| Sbjct 9235 GGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAAGAGCCGGAGAAGAAGATA 9176 Query 122779 CCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTT 122828 ||||| || ||||| |||| ||||| ||||| |||| | ||| ||| Sbjct 9175 CCCTCTACGGCAGCAAAGGCAACCAGGCGCTCGGCAAAGGTG-GAGTCTT 9127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627962877228000