Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689965.1_202016-07-20] 8,805 sequences; 43,736,635 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq248 188 9e-43 seq4834 123 3e-23 >seq248 Length=52618 Score = 188 bits (208), Expect = 9e-43 Identities = 559/851 (66%), Gaps = 21/851 (2%) Strand=Plus/Minus Query 118719 GCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAG 118778 || || || || |||| | ||||||| | | ||||||| || || |||||||||| | Sbjct 28101 GCAAGGTTGCAGACAGCGACCTCATCCGGAGCGCTGTACTCCATGATCTCCGTGCACAGG 28042 Query 118779 TTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTG 118838 || || | ||| |||||||| | ||||||||| || ||||| ||| || |||||| Sbjct 28041 TTGGAGCACTTGATGGTGCCGAGGTTCTTTTGGTTCGACTTGCGGTTGGCAGCGTCCTTG 27982 Query 118839 TAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATC 118897 ||||||||| | || | || |||||||| || | || ||||| || | ||| | | | Sbjct 27981 TAAAGCATGAAAGGGTTGCCAGTCTCCGTCTGAGCCTCGAGAACGGCGTACCAAAGCTTT 27922 Query 118898 GGCAGCTGGCACAGT--GGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGCT 118955 | || | || || |||| || || ||||| ||||||||| |||||| || Sbjct 27921 TGGGCCTTG-ACGGTTCGGCG--AGCACGACCCTCACGCTCGTACTTCTCGTAGAGAGCC 27865 Query 118956 TCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGAC 119015 || ||||| || || | | || | ||| || || || | | ||||| | || ||| Sbjct 27864 TCGAACTCGTCGCCGTAGACATCAGCGAGACCGGGGCACTCAGCGGGGCACATCAGCGAC 27805 Query 119016 CATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAG 119075 || | || || || || ||||||||||| | ||| |||||||| || || ||||| Sbjct 27804 CACTCTCCGTTCTGTTCGACTCGCTTCATGAACAAGTCAGGGATCCAAAGGGCGTAGAAG 27745 Query 119076 AGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATG 119135 || || || || | || || | || || || | | || | || || | | Sbjct 27744 AGCTCACGGGCTCGGACCTCCTCCTTGCCGTGGTTCTTCCTGAGGTCGAGGAACTCGAAG 27685 Query 119136 ATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACG------ACCA 119189 | || | |||||| || || | ||| | |||| | | ||| |||| ||| Sbjct 27684 ACGTCAGAGTGCCAGGGCTCAATGTAGATGGCGA-AGGCACCT--GGACGCTTGTTGCCA 27628 Query 119190 GCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCG 119249 |||| | || || | || ||| ||| || || |||||||| || | |||||| | Sbjct 27627 CCCTGATCGACGTAGCGAGCGGTGTTGTTGAAGACGCGAAGCATAGGCACGATACCGTTA 27568 Query 119250 GATTGGCCATTTGTCCCCCGAA--TACGAGACTTATTGGCTCTGACATCGTGGATGTGCA 119307 || || || || || || || ||| | | | | || |||||||| | Sbjct 27567 GAGACACCGTTAGTTCCGGCAATGTATGAGCC--GGTACCACGGATGCAGTGGATGTTGA 27510 Query 119308 TACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCC 119367 || || || || ||| ||| ||| ||||| | ||||| || ||||||| | Sbjct 27509 GGCCGATGCCACCAGCCGTCTTGCTGATCATGGCGCAGGTCTTGAGAGTGTCGTAGATGC 27450 Query 119368 CATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTGGGTG 119427 | ||||||||||| |||| | | || |||||||| ||||||||||| |||||| Sbjct 27449 CGTCGATCGAGTCGTCCTTCATGGTGACCAGGAAGCACGATGACATTTGAGGGTTGGGTG 27390 Query 119428 TACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCT-TGGGACATCTTGTCG 119486 |||||||||||||||| || || | || ||| |||| ||| | | ||||| || | Sbjct 27389 TACCAGCGTTGAAGAGGGTGGGGGAGGCATGGGTGAA-GTACTTCTCCGACATGAGGTTG 27331 Query 119487 TAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAAC 119546 || || || | | | || ||| |||||| || |||| | || ||||| | | Sbjct 27330 TAAGTGTCGATGGCCTCGTCGATGGAACTCCCGTGGATGCCGACAGCAACTCGCATGAGC 27271 Query 119547 ATGTATTGGGG 119557 |||| |||||| Sbjct 27270 ATGTGTTGGGG 27260 >seq4834 Length=10274 Score = 123 bits (136), Expect = 3e-23 Identities = 177/244 (73%), Gaps = 4/244 (2%) Strand=Plus/Minus Query 130016 GCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 130075 ||||| || ||| ||||||||||| ||| |||||| || || |||||| ||||| Sbjct 9295 GCAAAGTCGGTGTGCAGACCCTCGTCTCGGCTGATGAGCTCGTTGGAGAAGGTGAGACCG 9236 Query 130076 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 130135 ||||||||||| |||||||| | |||||| || | || ||||| ||||||||||| Sbjct 9235 GGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAAGAGCCGGAGAAGAAGATA 9176 Query 130136 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGT-ATCAAA 130194 ||||| || || || |||| || ||||| ||||||| | | | ||| || | | Sbjct 9175 CCCTCTACGGCAGCAAAGGCAACCAGGCGCTCGGCAAAGGTG-GAGTCTTCGTCGTTGAT 9117 Query 130195 CCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGG-ACGGTCTGGATCGCTTCAA 130253 ||| || ||||||| ||||||| || || ||||| | ||||| ||||| || | Sbjct 9116 CCAGCGCAGGGCCCACTCGGCCTTTTGCTTGA-CGACGGGAATGGTCTCCATCGCGTCGA 9058 Query 130254 AGAG 130257 |||| Sbjct 9057 AGAG 9054 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618367133475800