Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689965.1_202016-07-20] 8,805 sequences; 43,736,635 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq248 172 6e-38 seq4834 127 2e-24 >seq248 Length=52618 Score = 172 bits (190), Expect = 6e-38 Identities = 534/814 (66%), Gaps = 23/814 (3%) Strand=Plus/Plus Query 104221 CCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGT 104280 ||| || ||||| ||||||| || || |||| || || ||| ||| || | Sbjct 27259 CCCCCAACACATGCTCATGCGAGTTGCTGTCGGCATCCACGGGAGTTCCATCGACGAGGC 27318 Query 104281 CTTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCT 104339 | | || || ||| || ||||| | | ||| |||| || || | || ||||||| Sbjct 27319 CATCGACACTTACAACCTCATGTCGGAGAAGTAC-TTCACCCATGCCTCCCCCACCCTCT 27377 Query 104340 TCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 104399 |||| ||||||||||| | || |||||||| |||||||| || ||| ||||| | Sbjct 27378 TCAACGCTGGTACACCCAACCCTCAAATGTCATCGTGCTTCCTGGTCACCATGAAGGACG 27437 Query 104400 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 104459 |||| ||| |||| ||||| | ||||| | | || || ||| ||| ||||| Sbjct 27438 ACTCGATCGACGGCATCTACGACACTCTCAAGACCTGCGCCATGATCAGCAAGACGGCTG 27497 Query 104460 GGGGTATTGGGATGCACATCCA-TG-AT--GTGAGAGCCAATAAATCTCGTATTCGGGGG 104515 | || || || | ||||||| || || ||| | | | | | ||| || Sbjct 27498 GTGGCATCGGCCTCAACATCCACTGCATCCGTGGTACCGGCTCATAC----ATTGCCGGA 27553 Query 104516 ACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGC 104575 || || ||| || | ||||| | || ||||||||||| || ||| ||| || ||| Sbjct 27554 ACTAACGGTGTCTCTAACGGTATCGTGCCTATGCTTCGCGTCTTCAACAACACCGCTCGC 27613 Query 104576 TATGTAAATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCA 104629 || || |||| | ||| ||||| | || | |||| |||| ||||||| Sbjct 27614 TACGTCGATCAGGGTGGCAACAAGCGTCCA---GGTGCCTTCGCCATCTACATTGAGCCC 27670 Query 104630 TGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCG 104689 |||||| | || || | |||||||| || | | ||||| || | ||||||| Sbjct 27671 TGGCACTCTGACGTCTTCGAGTTCCTCGACCTCAGGAAGAACCACGGCAAGGAGGAGGTC 27730 Query 104690 CGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAG 104749 || ||| || ||||||| ||| || ||||| || || | ||||||||| |||| || Sbjct 27731 CGAGCCCGTGAGCTCTTCTACGCCCTTTGGATCCCTGACTTGTTCATGAAGCGAGTCGAA 27790 Query 104750 GAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTG 104809 ||| || | ||||| || | || || | || || |||||| | |||| | Sbjct 27791 CAGAACGGAGAGTGGTCGCTGATGTGCCCCGCTGAGTGCCCCGGTCTCGCTGATGTCTAC 27850 Query 104810 GGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCG-AC 104868 || || ||||| || || || ||| ||||||||| || ||||| || | || || Sbjct 27851 GGCGACGAGTTCGAGGCTCTCTACGAGAAGTACGAGCGTGAGGGTCGTGC-TCGCCGAAC 27909 Query 104869 GGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACAC 104927 || | || | | | | ||| | || ||||| || |||| || |||||||| | | Sbjct 27910 CGT-CAAGGCCCAAAAGCTTTGGTACGCCGTTCTCGAGGCTCAGACGGAGACTGGCAACC 27968 Query 104928 CATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGA 104987 | | |||||||||||| ||||| |||| ||| || |||||||| | || | Sbjct 27969 CTTTCATGCTTTACAAGGACGCTGCCAACCGCAAGTCGAACCAAAAGAACCTCGGCACCA 28028 Query 104988 TCAAGAGTTCCAATCTCTGTACAGAAATCTTGGA 105021 ||||| | ||||| || || || || ||| |||| Sbjct 28029 TCAAGTGCTCCAACCTGTGCACGGAGATCATGGA 28062 >seq4834 Length=10274 Score = 127 bits (140), Expect = 2e-24 Identities = 124/160 (78%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 94796 CCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCT 94855 ||||||| ||||| || | || ||||| || ||||||||||||||||| || || | Sbjct 9136 CCTTTGCCGAGCGCCTGGTTGCCTTTGCTGCCGTAGAGGGTATCTTCTTCTCCGGCTCTT 9195 Query 94856 TCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACG 94915 || | | || | |||||||||||||| ||||||||||| |||||| ||||||||||| Sbjct 9196 TCGCCTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTCACCTTCTCCAACG 9255 Query 94916 AGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 |||| ||| || |||||||| || ||| || ||||| Sbjct 9256 AGCTCATCAGCCGAGACGAGGGTCTGCACACCGACTTTGC 9295 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583196604858200