Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689965.1_202016-07-20] 8,805 sequences; 43,736,635 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq248 284 1e-71 seq8749 98.7 1e-15 >seq248 Length=52618 Score = 284 bits (314), Expect = 1e-71 Identities = 481/689 (70%), Gaps = 6/689 (1%) Strand=Plus/Plus Query 53267 AAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAATCACCCTCAGATG 53326 |||||||| || || ||| | || ||||| |||||||||||||| ||||||| ||| Sbjct 27347 AAGTACTTCACCCATGCCTCCCCCACCCTCTTCAACGCTGGTACACCCAACCCTCAAATG 27406 Query 53327 TCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATCTACGAGACGCTC 53386 || ||||||||||| | |||||||| ||||||||||||||||||||||| || ||| Sbjct 27407 TCATCGTGCTTCCTGGTCACCATGAAGGACGACTCGATCGACGGCATCTACGACACTCTC 27466 Query 53387 AAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCACTGCTCGAACGTC 53446 ||| || ||| ||| |||| | | ||||| ||||| || || | | || Sbjct 27467 AAGACCTGCGCCATGATCAGCAAGACGGCTGGTGGCATCGGCCTCAACATCCACTGCATC 27526 Query 53447 CGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATGGAATCGTGCCTATG 53506 |||| | |||| || || || || ||||| ||| | | || |||||||||||| Sbjct 27527 CGTGGTACCGGCTCATACATTGCCGGAACTAACGGTGTCTCTAACGGTATCGTGCCTATG 27586 Query 53507 CTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTGGGAAGCG-CAAGGG 53565 || ||||||||||||||||| || || |||||| | |||||||| ||||| | ||| Sbjct 27587 CTTCGCGTCTTCAACAACACCGCTCGCTACGTCGATCAGGGTGGCAACAAGCGTCCAGGT 27646 Query 53566 GTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGTTTCTCGAGCTGCG 53625 | | |||||||||||| | ||||| |||||| | ||| | | ||||| ||||| || | Sbjct 27647 G-CCTTCGCCATCTACATTGAGCCCTGGCACTCTGACGTCTTCGAGTTCCTCGACCTCAG 27705 Query 53626 TCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTT-TACAGCTCTGTGGATTC 53684 ||| || || | || ||| | || |||||| || || ||| || || ||||| | Sbjct 27706 GAAGAACCACGGCAAGGAGGAGGTCCGAGCCCGTGAGCTCTTCTAC-GCCCTTTGGATCC 27764 Query 53685 CGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCTGATGTGCCCGAACG 53744 | ||| | |||||| | || || || ||| ||||||| ||||||||||| | Sbjct 27765 CTGACTTGTTCATGAAGCGAGTCGAACAGAACGGAGAGTGGTCGCTGATGTGCCCCGCTG 27824 Query 53745 AGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTTTAACGAGATGTATCGGACGTACG 53804 |||||||||| ||| | ||||||||| || ||||| | | | || || ||||| Sbjct 27825 AGTGCCCCGGTCTCGCTGATGTCTACGGCGACGAGTTCGAGGCTCTCTACGAGAAGTACG 27884 Query 53805 CAGTTCAGGGCCGCTACAAGAAGAA-GGTCAAGGCGCGTGAGGTATGGGATGCAATCCTC 53863 | |||| || | | | ||| |||||||| | || | ||| | || | ||| Sbjct 27885 AGCGTGAGGGTCG-TGCTCGCCGAACCGTCAAGGCCCAAAAGCTTTGGTACGCCGTTCTC 27943 Query 53864 AAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTACAAGGATTCGGTCAACGAGAAG 53923 || ||| |||||| || | || | |||| |||||||| | | |||| ||| Sbjct 27944 GAGGCTCAGACGGAGACTGGCAACCCTTTCATGCTTTACAAGGACGCTGCCAACCGCAAG 28003 Query 53924 AGCAACCAGAAGAACATCGGCGTCATCAA 53952 ||||| |||||| ||||| |||||| Sbjct 28004 TCGAACCAAAAGAACCTCGGCACCATCAA 28032 Score = 95.1 bits (104), Expect = 1e-14 Identities = 308/464 (66%), Gaps = 27/464 (6%) Strand=Plus/Plus Query 55478 GGCCTACGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATG 55537 || || || |||||||| || | || || ||||| ||||| ||||| ||||||| | Sbjct 28550 GGTCTCCGAAACTCCCTCCTGCTCGCCCCTATGCCCACCGCTTCGACAAGTCAGATCCTC 28609 Query 55538 GGCAACAACGAGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCA 55597 ||| ||||||| || ||||| ||||||| |||| | ||| || || || || Sbjct 28610 GGCTTCAACGAGTGCTTTGAGCCTTACACGAGCAACCTTTACACCCGACGTGTGCTCGCC 28669 Query 55598 GGTGAGTTTGTCATGATCAACAA---GCACCT-CGTCAAGGACCTGCAG-AAGATCAACA 55652 || ||||| | ||||| || || ||| | | | || ||| || Sbjct 28670 GGCGAGTTCCAAGTCGTCAACCCTTGGCTGCTGCGTGA-GCTTGTCGAGCAAGGTCT--- 28725 Query 55653 AGTGGAACCCGCAGATCAAGA--CGGAT-ATTGTGCGGAACGGGGGGTCCGTCCAGAATC 55709 ||||||| |||||| |||| || || || | | |||| || || | ||||| Sbjct 28726 -GTGGAACGAGCAGATGAAGAACCGCATCATAGCCC---ACGGCGGCTCGATTCAGAACG 28781 Query 55710 TG---GAGATTCCTCTGCGTCTCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGA 55766 || | ||||| || |||||| | ||| ||| ||||||||||| | |||| Sbjct 28782 TGCCCGGCATTCCCGACCGCATCAAGGCACTGTACAAGACAGTGTGGGAGATCTCGCAGA 28841 Query 55767 AGAGTC-TGATTGACATGAGTGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTG 55825 || ||| | || |||||| ||| || || ||||| | ||| ||| || || |||| Sbjct 28842 AG-GTCATCATCGACATGGCTGCCGACCGAGGTGCCTTTATCTGCCAATCTCAAAGTCTG 28900 Query 55826 AACATCTTCATGGA-GAATCCTTCACTGGCCAAGTT--GAGCTCGATGCACTTTTACGGG 55882 |||||| | | | | | || | |||||| || |||| |||||||| ||||| Sbjct 28901 AACATCCACCTCCAAGCACCCAGCTTTGGCCAGCTTACGAGC---ATGCACTTCTACGGC 28957 Query 55883 TGGAAGAAGGGACTCAAGACGGGTATGTACTATCTGCGGACCCG 55926 |||||||||||| | |||||||| | ||||| || || ||||| Sbjct 28958 TGGAAGAAGGGATTGAAGACGGGAACATACTACCTCCGAACCCG 29001 >seq8749 Length=22740 Score = 98.7 bits (108), Expect = 1e-15 Identities = 146/203 (72%), Gaps = 8/203 (4%) Strand=Plus/Plus Query 152029 GTGAAGATGTATCGGGAGCTG--GCCGCATCCTTGCCACC--TGCCAGCCGCGTTCCAAA 152084 ||||| ||||| || ||||| ||||| ||||||||||| || || || || || || Sbjct 13707 GTGAAAATGTAACG--AGCTGAGGCCGCGTCCTTGCCACCCATGGCA--CGAGTGCCGAA 13762 Query 152085 CTGTCCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATT 152144 ||| || ||| |||||| |||| ||||| ||||| ||| | ||||||||||| Sbjct 13763 CTGACCGATGGGGGCGAGGATGTTGGCATTGTTCGCGCCGCAGAAGTCTTGAGCCAAATT 13822 Query 152145 CACAATCGTGCCCTGCAGACTCGCTTCACCGTGGTGATACGCCGTCTGCTCCGCGATGTA 152204 ||||||||| |||||||| || ||||| || || || || ||||| | | || Sbjct 13823 TACAATCGTGGATTGCAGACTTTGCTCGCCGTGATGGTATGCGGTGTGCTCGCCCACATA 13882 Query 152205 TCCCGCCAACTGCGCCACCTTCA 152227 || ||||| || || |||| || Sbjct 13883 ACCAGCCAATTGGGCAACCTGCA 13905 Score = 82.4 bits (90), Expect = 8e-11 Identities = 140/201 (70%), Gaps = 4/201 (2%) Strand=Plus/Plus Query 117305 GTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAG--ACGCGTACCGAATT 117362 |||||||||||||||| || || ||||||||||| || | ||| || ||||| | Sbjct 13707 GTGAAAATGTAACGAGCTGAGGCCGCGTCCTTGCCACC--CATGGCACGAGTGCCGAACT 13764 Query 117363 GTCCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGA 117422 | || | || | | || ||| ||||| ||||| |||| ||||||||| || | Sbjct 13765 GACCGATGGGGGCGAGGATGTTGGCATTGTTCGCGCCGCAGAAGTCTTGAGCCAAATTTA 13824 Query 117423 CAATCGTACCTTGGAGGCTCGCCTCACCATGGTGATACGCCGTCTGCTCCGCCACGTAGC 117482 ||||||| ||| || || ||| || || || || || || ||||| |||| || | Sbjct 13825 CAATCGTGGATTGCAGACTTTGCTCGCCGTGATGGTATGCGGTGTGCTCGCCCACATAAC 13884 Query 117483 CCGCCAGCTGAGCCACCTTCA 117503 | |||| || || |||| || Sbjct 13885 CAGCCAATTGGGCAACCTGCA 13905 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547155772039000