Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689965.1_202016-07-20] 8,805 sequences; 43,736,635 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq6382 132 4e-26 seq2372 132 4e-26 seq3785 131 1e-25 seq7298 127 2e-24 seq6491 109 5e-19 seq4088 105 6e-18 >seq6382 Length=53231 Score = 132 bits (146), Expect = 4e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || || ||||||||| | || || || || |||||| | || Sbjct 136 ATGCAGATTTTCGTCAAGACCCTCACCGGCAAGACCATCACACTCGAGGTGGAATCATCA 195 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| || ||||| ||||| || ||||| || || || || Sbjct 196 GACACCATCGACAATGTCAAGACGAAGATTCAGGACAAGGAGGGCATCCCCCCGGACCAG 255 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| || || | ||| ||||| || | ||||| | ||| |||| || |||||| Sbjct 256 CAGCGATTGATCTTCGCGGGCAAGCAGCTCGAAGATGGCCGCACCCTTTCGGACTACAAC 315 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215 |||||||||||||| || | |||||||| | ||| | || |||||| Sbjct 316 ATTCAAAAGGAGTCCACTCTTCATTTGGTCCTCCGTCTCCGTGGTGGC 363 Score = 89.7 bits (98), Expect = 4e-13 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 27081 GACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAA 27140 ||||| || ||||| || || || ||||| || || || | ||||||||| || ||||| Sbjct 1 GACAAGGAGGGCATTCCTCCGGACCAACAACGATTGATCTTCGCCGGCAAGCAGTTGGAG 60 Query 27141 GACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTG 27200 || | ||| |||||||||||||||| || |||||||| || | || ||||| | Sbjct 61 GATGGCCGCACCCTTTCCGATTACAACATCCAGAAGGAGTCCACTCTTCACTTGGTCCTC 120 Query 27201 CGTTTGCGGGGTGGCAT 27217 ||| | || ||||| || Sbjct 121 CGTCTCCGCGGTGGTAT 137 >seq2372 Length=9363 Score = 132 bits (146), Expect = 4e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || || ||||||||| | || || || ||||| || | || Sbjct 1 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACAATCACACTCGAAGTCGAGTCCTCA 60 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| || ||||||||||| || || || || || |||||| Sbjct 61 GACACTATCGACAACGTCAAGACCAAGATTCAAGACAAGGAGGGTATTCCTCCGGATCAA 120 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| || || | ||| ||||| || ||||| || | ||| |||| || |||||| Sbjct 121 CAGCGATTGATCTTCGCGGGCAAGCAGTTGGAGGATGGCCGCACCCTTTCTGACTACAAC 180 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215 || ||||| ||||| || | |||||||| | ||| | || |||||| Sbjct 181 ATCCAAAAAGAGTCCACACTTCATTTGGTCCTCCGTCTCCGCGGTGGC 228 >seq3785 Length=5141 Score = 131 bits (144), Expect = 1e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || ||||| ||||||||| | || |||||||| |||||| | || Sbjct 564 ATGCAGATCTTCGTGAAGACTCTCACCGGCAAGACCATCACTCTTGAGGTGGAATCATCA 505 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || || || || || ||||| || || || || || || || Sbjct 504 GACACCATCGACAACGTGAAGACGAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAG 445 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | ||||||||| || ||||| || | || |||| ||||||||| Sbjct 444 CAGCGCCTTATCTTCGCCGGCAAGCAGTTGGAGGATGGCCGCACTCTTTCTGATTACAAC 385 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || |||||||| || | || |||||| | ||| |||| ||||| || Sbjct 384 ATCCAGAAGGAGTCAACGCTTCACTTGGTTCTTCGTCTGCGCGGTGGTAT 335 Score = 127 bits (140), Expect = 2e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 27000 GTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAG 27059 || || |||||||| |||||| | || || ||||| || || | || ||| | ||||| Sbjct 4528 GTTAAGACTCTGACTGGCAAGACCATCACCCTTGAGGTTGAGTCTTCAGACACCATTGAC 4587 Query 27060 ATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATA 27119 | ||||| || || |||||||| || ||||| || || || || ||||| | || Sbjct 4588 AATGTCAAGACCAAGATCCAAGACAAGGAGGGCATTCCTCCGGACCAGCAGCGCCTCATC 4647 Query 27120 TACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAG 27179 | ||||||||| ||| | || ||| | ||| |||||||||||||||| ||||||||| Sbjct 4648 TTCGCCGGCAAGCAACTCGAGGACGGCCGCACCCTTTCCGATTACAACATCCAAAAGGAG 4707 Query 27180 TCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || | || ||||| | || |||| ||||| || Sbjct 4708 TCCACACTGCACTTGGTCCTCCGCCTGCGTGGTGGTAT 4745 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 27009 CTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAA 27068 || ||||||||| | || |||||||| |||||| | || ||| | || || | || || Sbjct 299 CTCACCGGCAAGACCATCACTCTTGAGGTGGAATCATCAGACACCATCGACAACGTGAAG 240 Query 27069 CAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGC 27128 || || || ||||| || || || || || || || ||||| | || | ||||||| Sbjct 239 ACGAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAGCAGCGCCTTATCTTCGCCGGC 180 Query 27129 AAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTA 27188 || || ||||| || | || |||| ||||||||||| || |||||||| || | Sbjct 179 AAGCAGTTGGAGGATGGCCGCACTCTTTCTGATTACAACATCCAGAAGGAGTCAACGCTT 120 Query 27189 CATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || |||||| | ||| |||| ||||| || Sbjct 119 CACTTGGTTCTTCGTCTGCGCGGTGGTAT 91 >seq7298 Length=1044 Score = 127 bits (140), Expect = 2e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 27000 GTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAG 27059 || || |||||||| |||||| | || || || || || || | || ||| | || || Sbjct 548 GTTAAGACTCTGACTGGCAAGACCATCACCCTCGAGGTTGAGTCCTCGGACACCATCGAC 489 Query 27060 ATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATA 27119 | ||||| || || |||||||| || ||||| || || || ||||||||| | || Sbjct 488 AATGTCAAGACCAAGATCCAAGACAAGGAGGGCATCCCTCCGGACCAACAGCGTCTCATC 429 Query 27120 TACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAG 27179 | ||||||||| ||| | || ||| | ||| |||||||||||||||| || |||||| Sbjct 428 TTCGCCGGCAAGCAACTCGAGGACGGCCGCACCCTTTCCGATTACAACATCCAGAAGGAG 369 Query 27180 TCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || | || ||||| | || |||| |||||||| Sbjct 368 TCCACACTGCACTTGGTCCTCCGCCTGCGTGGTGGCAT 331 >seq6491 Length=17318 Score = 109 bits (120), Expect = 5e-19 Identities = 143/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| || || || || ||||| || ||| |||| || || || ||||| | || Sbjct 5154 CATGCAGATCTTCGTCAAGACCCTGACGGGTAAGACTATCACCCTCGAGGTGGAGTCTTC 5095 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 |||||| || || ||||| ||||| || ||||| ||||| || || || || || Sbjct 5094 CGACTCCATCGACGCCGTCAAGACCAAAATCCAGGACAAGGAAGGTATCCCCCCGGACCA 5035 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||||| | || | ||||||||| || | || ||| | || |||| || ||||| Sbjct 5034 GCAGCGACTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGTACTCTTTCGGACTACAA 4975 Query 27167 CATTCAAAAGGAGTCGAC 27184 ||| || ||||||||||| Sbjct 4974 CATCCAGAAGGAGTCGAC 4957 >seq4088 Length=15668 Score = 105 bits (116), Expect = 6e-18 Identities = 142/195 (73%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || || ||||||||| | || ||||||||||| || | || Sbjct 8974 ATGCAGATCTTCGTCAAGACACTCACCGGCAAGGCCATCACTCTTGAAGTCGATTCATCA 9033 Query 27048 GACTCGATTGA-GATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 || |||| || | || || || || || || ||||| ||||||| || || || || Sbjct 9034 GATACGATCGACAACGGCCAGAC-CAAGATCCAGGACAAGGAAGGCACCCCTCCGGACCA 9092 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 |||||| | || | ||||||||| ||| | || ||| | ||| | ||||| ||||| Sbjct 9093 ACAGCGCCTTATCTTCGCCGGCAAGCAACTCGAGGACGGCCGCACCCTCTCCGACTACAA 9152 Query 27167 CATTCAAAAGGAGTC 27181 ||| || || ||||| Sbjct 9153 CATCCAGAAAGAGTC 9167 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434870531793600