Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689965.1_202016-07-20] 8,805 sequences; 43,736,635 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq3785 188 2e-42 seq6382 176 1e-38 seq7298 170 4e-37 seq2372 170 4e-37 seq8729 167 5e-36 seq8196 163 7e-35 seq6491 156 1e-32 seq4088 150 4e-31 >seq3785 Length=5141 Score = 188 bits (208), Expect = 2e-42 Identities = 169/212 (80%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | |||||| || ||||| || |||||||| ||||| | ||| || | ||||| Sbjct 353 AGAACCAAGTGAAGCGTTGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCC 412 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||| ||||||||| |||||||||||||| || ||||| || || | || ||||||||| Sbjct 413 TCCAACTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCC 472 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| |||||||| ||||||||||| || ||| ||||| |||||||| ||| Sbjct 473 TGGATCTTCGTCTTCACGTTGTCGATGGTGTCTGATGATTCCACCTCAAGAGTGATGGTC 532 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || ||||||||||| || || | |||||| Sbjct 533 TTGCCGGTGAGAGTCTTCACGAAGATCTGCAT 564 Score = 170 bits (188), Expect = 4e-37 Identities = 157/198 (79%), Gaps = 1/198 (1%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | |||||| || ||||| || |||||||| ||||| | ||| || | ||||| Sbjct 109 AGAACCAAGTGAAGCGTTGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCC 168 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||| ||||||||| |||||||||||||| || ||||| || || | || ||||||||| Sbjct 169 TCCAACTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCC 228 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| |||||||| ||||||||||| || ||| ||||| |||||||| ||| Sbjct 229 TGGATCTTCGTCTTCACGTTGTCGATGGTGTCTGATGATTCCACCTCAAGAGTGATGGTC 288 Query 211083 TTTCCCGTGAGA-GTCTT 211099 || || ||||| ||||| Sbjct 289 TTGCCGGTGAGNTGTCTT 306 Score = 163 bits (180), Expect = 7e-35 Identities = 156/200 (78%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | ||| || |||||||| ||||||||||| ||||| | |||||| | || || Sbjct 4727 AGGACCAAGTGCAGTGTGGACTCCTTTTGGATGTTGTAATCGGAAAGGGTGCGGCCGTCC 4668 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || || |||||||| |||||||| ||||| || ||||| ||||||| || |||||||| Sbjct 4667 TCGAGTTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCT 4608 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || || || || |||||||| || |||||||| || ||||| ||| Sbjct 4607 TGGATCTTGGTCTTGACATTGTCAATGGTGTCTGAAGACTCAACCTCAAGGGTGATGGTC 4548 Query 211083 TTTCCCGTGAGAGTCTTTAC 211102 || || || |||||||| || Sbjct 4547 TTGCCAGTCAGAGTCTTAAC 4528 Score = 161 bits (178), Expect = 2e-34 Identities = 163/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | |||||| |||||||| || |||||||| || || | ||||| | || || Sbjct 4955 AGAACCAAGTGAAGTGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCC 4896 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || |||||||| || |||||||||||||| || ||||| ||||| | || |||||||| Sbjct 4895 TCGAGCTGCTTTCCGGCGAAGATAAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCT 4836 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || || || ||||| ||||| || |||||| ||||| ||||| ||| Sbjct 4835 TGGATCTTGGTCTTGACATTGTCGATCGTGTCTGATGATTCAACTTCGAGTGTGATGGTC 4776 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || ||||| ||||| || || | |||||| Sbjct 4775 TTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 4744 Score = 154 bits (170), Expect = 3e-32 Identities = 154/200 (77%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | ||| | |||||||| || |||||||| || |||| | || | || || Sbjct 581 AGGACCAAGTGCAATGTGGACTCCTTCTGGATGTTGTAGTCCGACAATGTTCGGCCGTCC 640 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| || ||||| ||||| || ||||| ||||||| || ||||| || Sbjct 641 TCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTATCT 700 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 ||||||||| || ||||| || |||||||| ||| ||||||||||| ||||| ||| Sbjct 701 TGGATCTTTGTCTTGACGTTGTCAATGGTGTCCGAGGACTCAACCTCGAGGGTGATGGTC 760 Query 211083 TTTCCCGTGAGAGTCTTTAC 211102 || || || |||||||| || Sbjct 761 TTGCCAGTCAGAGTCTTGAC 780 Score = 145 bits (160), Expect = 2e-29 Identities = 133/168 (79%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 210947 AAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGG 211006 |||||| | ||||| |||| ||||||||| |||||||| | || |||||||| ||||| Sbjct 5139 AAGGGTGCGGCCATCCTCCAACTGCTTGCCGGCGAAGATCAATCGGTGTTGGTCCGGAGG 5080 Query 211007 AACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAAC 211066 | || ||||||||||||||||| |||||||| ||||| ||||| ||| || || Sbjct 5079 GATGCCCTCCTTGTCCTGGATCTTCGTCTTCACGTTGTCGATCGTGTCGGAGGACTCCAC 5020 Query 211067 CTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||| |||||||| ||||| || ||||| ||||| || || | |||||| Sbjct 5019 CTCAAGAGTGATGGTCTTGCCGGTGAGCGTCTTGACGAAGATCTGCAT 4972 >seq6382 Length=53231 Score = 176 bits (194), Expect = 1e-38 Identities = 166/212 (78%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | |||||||||||||| ||||| ||||| || |||| |||||| | |||||| Sbjct 347 AGGACCAAATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCCGAAAGGGTGCGGCCATCT 288 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| | || || ||||| || || | || ||||||||| Sbjct 287 TCGAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC 228 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| || || || ||||||||||| || ||| |||||||| ||||| ||| Sbjct 227 TGAATCTTCGTCTTGACATTGTCGATGGTGTCTGATGATTCCACCTCGAGTGTGATGGTC 168 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || ||||| ||||| || || | |||||| Sbjct 167 TTGCCGGTGAGGGTCTTGACGAAAATCTGCAT 136 Score = 125 bits (138), Expect = 2e-23 Identities = 99/119 (83%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | ||||||||||||||| || |||||||| ||||| | |||||| | ||||| Sbjct 119 AGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCATCC 60 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTC 211021 |||| ||||||||| |||||||| | ||||||||||| ||||||| || |||||||| Sbjct 59 TCCAACTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCCGGAGGAATGCCCTCCTTGTC 1 >seq7298 Length=1044 Score = 170 bits (188), Expect = 4e-37 Identities = 156/197 (79%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977 |||||||| || |||||||| || |||| ||||| | ||| ||||| ||||||||||| Sbjct 136 GTGGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTACGTCCGTCTTCAAGCTGCTTGCCG 195 Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037 |||||||| | ||||||||||| ||||| | || ||||||||||| ||||| || Sbjct 196 GCGAAGATCAATCGTTGTTGGTCCGGAGGGATGCCCTCCTTGTCCTGAATCTTGGTCTTG 255 Query 211038 ACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTC 211097 ||||| ||||| ||||| ||| ||||| ||||| ||||| ||||| || ||||| ||| Sbjct 256 ACGTTGTCGATAGTGTCGGAGGACTCAACTTCGAGTGTGATTGTCTTGCCGGTGAGGGTC 315 Query 211098 TTTACAAACACCTGCAT 211114 || || || | |||||| Sbjct 316 TTGACGAAGATCTGCAT 332 Score = 167 bits (184), Expect = 5e-36 Identities = 157/200 (79%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | ||| || |||||||| || |||||||| ||||| | |||||| | || || Sbjct 349 AGGACCAAGTGCAGTGTGGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCGTCC 408 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || || |||||||| |||||||| || || |||||||| ||||| | || |||||||| Sbjct 409 TCGAGTTGCTTGCCGGCGAAGATGAGACGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCT 468 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || || || ||||||||||| ||| ||||||||||| ||||| ||| Sbjct 469 TGGATCTTGGTCTTGACATTGTCGATGGTGTCCGAGGACTCAACCTCGAGGGTGATGGTC 528 Query 211083 TTTCCCGTGAGAGTCTTTAC 211102 || || || |||||||| || Sbjct 529 TTGCCAGTCAGAGTCTTAAC 548 Score = 98.7 bits (108), Expect = 2e-15 Identities = 84/104 (81%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070 || ||||||||||||||||| |||||||| ||||||||||| || ||| ||||| Sbjct 1 CCCTCCTTGTCCTGGATCTTCGTCTTCACGTTGTCGATGGTGTCTGATGATTCCACCTCA 60 Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 |||||||| ||||| || ||||| ||||| || || | |||||| Sbjct 61 AGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 104 >seq2372 Length=9363 Score = 170 bits (188), Expect = 4e-37 Identities = 165/212 (78%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | ||||| |||||||||||||||||||| || || | |||||| | ||||| Sbjct 212 AGGACCAAATGAAGTGTGGACTCTTTTTGGATGTTGTAGTCAGAAAGGGTGCGGCCATCC 153 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||| ||||||||| |||||||| | || ||||| || ||||||| || |||||||| Sbjct 152 TCCAACTGCTTGCCCGCGAAGATCAATCGCTGTTGATCCGGAGGAATACCCTCCTTGTCT 93 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| || ||||| ||||| ||||| ||| || || ||||| ||||| ||| Sbjct 92 TGAATCTTGGTCTTGACGTTGTCGATAGTGTCTGAGGACTCGACTTCGAGTGTGATTGTC 33 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || ||||| ||||| || || | |||||| Sbjct 32 TTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 1 >seq8729 Length=33442 Score = 167 bits (184), Expect = 5e-36 Identities = 164/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| || ||||| |||||||||||||| || || | || || | || ||| Sbjct 30265 AGGACGAGGTGGAGGGTGGATTCTTTTTGGATGTTGTAGTCGGATAGCGTTCGGCCGTCT 30206 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| || ||||||||||| || || | || |||||||| Sbjct 30205 TCGAGCTGCTTGCCGGCGAAGATGAGACGTTGTTGGTCTGGGGGGATGCCCTCCTTGTCT 30146 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| || || ||||| ||| || |||||||| ||||| ||| Sbjct 30145 TGGATCTTGGTCTTGACGTTGTCAATCGTGTCGGAGGACTCTACCTCGAGGGTGATGGTC 30086 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || ||||| || || | |||||| Sbjct 30085 TTGCCAGTAAGGGTCTTGACGAAGATCTGCAT 30054 >seq8196 Length=29145 Score = 163 bits (180), Expect = 7e-35 Identities = 156/200 (78%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | ||||||||||||||| || |||||||| || || | || || | || || Sbjct 8799 AGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGACCGTCC 8740 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| || || |||||||| || |||| |||||||||||| Sbjct 8739 TCGAGCTGCTTGCCGGCGAAGATGAGACGCTGTTGGTCCGGGGGAATACCTTCCTTGTCC 8680 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||| ||||||| ||| || || |||||||| ||||||||| Sbjct 8679 TGGATCTTGGTCTTGACGGCGTCGATGGAGTCGGACGACTCGACCTCGAGGGTGATCGTC 8620 Query 211083 TTTCCCGTGAGAGTCTTTAC 211102 || || ||||| ||||| || Sbjct 8619 TTGCCGGTGAGGGTCTTGAC 8600 >seq6491 Length=17318 Score = 156 bits (172), Expect = 1e-32 Identities = 164/213 (77%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| ||||| ||||| || |||||||| || |||| ||| || | || || Sbjct 4942 AGCACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGGCCGTCC 5001 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| || || || ||||| || || | |||||||||||| Sbjct 5002 TCGAGCTGCTTGCCGGCGAAGATGAGTCGCTGCTGGTCCGGGGGGATACCTTCCTTGTCC 5061 Query 211023 TGGATCTTTTGT-TTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGT 211081 ||||| ||| || || ||| ||||||| ||| || || |||||||| ||||| || Sbjct 5062 TGGAT-TTTGGTCTTGACGGCGTCGATGGAGTCGGAAGACTCCACCTCGAGGGTGATAGT 5120 Query 211082 CTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||| ||||| || ||||| || || | |||||| Sbjct 5121 CTTACCCGTCAGGGTCTTGACGAAGATCTGCAT 5153 >seq4088 Length=15668 Score = 150 bits (166), Expect = 4e-31 Identities = 161/212 (76%), Gaps = 3/212 (1%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||||||||| |||| ||||||| |||||||| || || | ||||| | || || Sbjct 9182 AGGACAAGGTGGAGAG---ACTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCC 9126 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || || |||||||| |||||||||||||| |||||||| ||||| |||||||||||| Sbjct 9125 TCGAGTTGCTTGCCGGCGAAGATAAGGCGCTGTTGGTCCGGAGGGGTGCCTTCCTTGTCC 9066 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| | |||| ||||| || || || || || || |||||||| | | Sbjct 9065 TGGATCTTGGTCTGGCCGTTGTCGATCGTATCTGATGAATCGACTTCAAGAGTGATGGCC 9006 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || ||||| ||||| || || | |||||| Sbjct 9005 TTGCCGGTGAGTGTCTTGACGAAGATCTGCAT 8974 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159021231353825