Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689965.1_202016-07-20] 8,805 sequences; 43,736,635 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq7298 131 1e-25 seq2372 129 4e-25 seq6382 109 4e-19 seq3785 98.7 7e-16 >seq7298 Length=1044 Score = 131 bits (144), Expect = 1e-25 Identities = 157/211 (74%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || |||||||| || || || ||||| ||||||||||| ||| | Sbjct 332 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACAATCACACTCGAAGTTGAGTCCTCC 273 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 |||||| | || || | || || || | || ||||| || || | || || || || Sbjct 272 GACACTATCGACAACGTCAAGACCAAGA-TTCAGGACAAGGAGGGCATCCCTCCGGACCA 214 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| || || || || |||||||| || || ||||||| ||| || | || ||||| Sbjct 213 ACAACGATTGATCTTCGCCGGCAAGCAGCTTGAAGACGGACGTACCCTCTCGGACTACAA 154 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTT 23820 ||| || || ||||||||||| ||||| ||| Sbjct 153 CATCCAGAAGGAGTCCACATTGCATTTGGTT 123 Score = 109 bits (120), Expect = 4e-19 Identities = 145/199 (73%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 23622 CGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGACACTGTTGA 23681 |||||| || || || || || || ||||| ||||| ||||| ||| ||||||| | || Sbjct 549 CGTTAAGACTCTGACTGGCAAGACCATCACCCTCGAGGTTGAGTCCTCGGACACCATCGA 490 Query 23682 -AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTAA 23740 ||| | || || || | | ||||| || || | || || || ||||||||| | | Sbjct 489 CAATGTCAAGACCAAGA-TCCAAGACAAGGAGGGCATCCCTCCGGACCAACAGCGTCTCA 431 Query 23741 TATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAACATACAAAAAG 23800 | || |||||||| ||||| || |||| ||||| | |||||||||||| || || | Sbjct 430 TCTTCGCCGGCAAGCAACTCGAGGACGGCCGCACCCTTTCCGATTACAACATCCAGAAGG 371 Query 23801 AGTCCACATTACATTTAGT 23819 |||||||| | || || || Sbjct 370 AGTCCACACTGCACTTGGT 352 >seq2372 Length=9363 Score = 129 bits (142), Expect = 4e-25 Identities = 156/210 (74%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || |||||||| || || || ||||| |||||||| || ||| | Sbjct 1 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACAATCACACTCGAAGTCGAGTCCTCA 60 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 |||||| | || || | || || || | || ||||| || ||| | || || ||||| Sbjct 61 GACACTATCGACAACGTCAAGACCAAGA-TTCAAGACAAGGAGGGTATTCCTCCGGATCA 119 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||||| || || || || ||||| || |||| || | ||||| | || ||||| Sbjct 120 ACAGCGATTGATCTTCGCGGGCAAGCAGTTGGAGGATGGCCGCACCCTTTCTGACTACAA 179 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGT 23819 ||| ||||||||||||||| | ||||| || Sbjct 180 CATCCAAAAAGAGTCCACACTTCATTTGGT 209 >seq6382 Length=53231 Score = 109 bits (120), Expect = 4e-19 Identities = 154/212 (73%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || |||||||| || || || ||||| ||||| || || || | Sbjct 136 ATGCAGATTTTCGTCAAGACCCTCACCGGCAAGACCATCACACTCGAGGTGGAATCATCA 195 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| | || || || ||| ||||| || || | || || || || Sbjct 196 GACACCATCGACAATGTCAAGAC-GAAGATTCAGGACAAGGAGGGCATCCCCCCGGACCA 254 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCA--CTTTAGGCGATTAC 23787 ||||| || || || || ||||| || || ||||| | |||| |||| | || ||| Sbjct 255 GCAGCGATTGATCTTCGCGGGCAAGCAGCTCGAAGATGGCCGCACCCTTTCG--GACTAC 312 Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGT 23819 ||||| ||||| |||||||| | ||||| || Sbjct 313 AACATTCAAAAGGAGTCCACTCTTCATTTGGT 344 >seq3785 Length=5141 Score = 98.7 bits (108), Expect = 7e-16 Identities = 150/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || |||||||| || || || ||||| ||||||||||| || | Sbjct 4744 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACACTCGAAGTTGAATCATCA 4803 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| | || || || || ||||| || || | || || || || Sbjct 4804 GACACGATCGACAATGTCAAGAC-CAAGATCCAAGACAAGGAGGGCATCCCTCCGGACCA 4862 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||||| | || || ||||| || || || || |||| || || | ||| ||||| Sbjct 4863 GCAGCGCCTTATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGAACCCTCTCCGACTACAA 4922 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTT 23820 ||| || || ||||||||| | || || ||| Sbjct 4923 CATCCAGAAGGAGTCCACACTTCACTTGGTT 4953 Score = 95.1 bits (104), Expect = 8e-15 Identities = 142/199 (71%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 23622 CGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGACACTGTTGA 23681 |||||| || || || || || || ||||| || || ||||| || | ||||| |||| Sbjct 4527 CGTTAAGACTCTGACTGGCAAGACCATCACCCTTGAGGTTGAGTCTTCAGACACCATTGA 4586 Query 23682 -AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTAA 23740 ||| | || || || | | ||||| || || | || || || || ||||| | | Sbjct 4587 CAATGTCAAGACCAAGA-TCCAAGACAAGGAGGGCATTCCTCCGGACCAGCAGCGCCTCA 4645 Query 23741 TATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAACATACAAAAAG 23800 | || |||||||| ||||| || |||| ||||| | |||||||||||| ||||| | Sbjct 4646 TCTTCGCCGGCAAGCAACTCGAGGACGGCCGCACCCTTTCCGATTACAACATCCAAAAGG 4705 Query 23801 AGTCCACATTACATTTAGT 23819 |||||||| | || || || Sbjct 4706 AGTCCACACTGCACTTGGT 4724 Score = 91.5 bits (100), Expect = 1e-13 Identities = 141/199 (71%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 23622 CGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGACACTGTTGA 23681 ||| || || || || || || || ||||| ||||| ||||| ||| ||||||| |||| Sbjct 781 CGTCAAGACTCTGACTGGCAAGACCATCACCCTCGAGGTTGAGTCCTCGGACACCATTGA 722 Query 23682 -AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTAA 23740 || | || ||||| | | || || || || | || || || || ||||| | | Sbjct 721 CAACGTCAAGACAAAGA-TCCAAGATAAGGAGGGCATTCCTCCGGACCAGCAGCGCCTCA 663 Query 23741 TATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAACATACAAAAAG 23800 | ||||||||||| || || || |||| || || || || |||||||| || || | Sbjct 662 TCTTTGCCGGCAAGCAGCTCGAGGACGGCCGAACATTGTCGGACTACAACATCCAGAAGG 603 Query 23801 AGTCCACATTACATTTAGT 23819 |||||||||| || || || Sbjct 602 AGTCCACATTGCACTTGGT 584 Score = 86.0 bits (94), Expect = 4e-12 Identities = 147/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || || ||||| || || || |||||||| || || || || | Sbjct 564 ATGCAGATCTTCGTGAAGACTCTCACCGGCAAGACCATCACTCTTGAGGTGGAATCATCA 505 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || || | || || || | | ||||| || ||| | || || || || Sbjct 504 GACACCATCGACAACGTGAAGACGAAGA-TCCAGGACAAGGAGGGTATCCCCCCGGACCA 446 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||||| | || || |||||||| || |||| || | |||||| | |||||||| Sbjct 445 GCAGCGCCTTATCTTCGCCGGCAAGCAGTTGGAGGATGGCCGCACTCTTTCTGATTACAA 386 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTT 23820 ||| || || ||||| || | || || ||| Sbjct 385 CATCCAGAAGGAGTCAACGCTTCACTTGGTT 355 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337973327872940