Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689965.1_202016-07-20] 8,805 sequences; 43,736,635 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq3785 174 4e-38 seq6382 168 2e-36 seq7298 158 3e-33 seq8729 150 4e-31 seq6491 150 4e-31 seq8196 136 1e-26 seq4088 120 7e-22 >seq3785 Length=5141 Score = 174 bits (192), Expect = 4e-38 Identities = 164/208 (79%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || |||||||| |||||||| || || || ||||| || ||||||||| |||||| Sbjct 561 CAGATCTTCGTGAAGACTCTCACCGGCAAGACCATCACTCTTGAGGTGGAATCATCAGAC 502 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| ||||| || ||||| |||||||| || || ||||| ||||||||||| Sbjct 501 ACCATCGACAACGTGAAGACGAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAGCAG 442 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || |||||||||||||| || ||| | || ||||| | |||||| | ||||| ||| || Sbjct 441 CGCCTTATCTTCGCCGGCAAGCAGTTGGAGGATGGCCGCACTCTTTCTGATTACAACATC 382 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTT 178131 || || || ||||| || || |||| || Sbjct 381 CAGAAGGAGTCAACGCTTCA-CTTGGTT 355 Score = 156 bits (172), Expect = 1e-32 Identities = 160/208 (77%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || ||||| || || || ||||| ||||| || ||| |||||| Sbjct 4747 CAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACACTCGAAGTTGAATCATCAGAC 4806 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || ||||| ||||| || ||||| || || ||||||||||||||||| Sbjct 4807 ACGATCGACAATGTCAAGACCAAGATCCAAGACAAGGAGGGCATCCCTCCGGACCAGCAG 4866 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || ||||||||||||||||| |||||||| || || | || || |||| || ||| || Sbjct 4867 CGCCTTATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGAACCCTCTCCGACTACAACATC 4926 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTT 178131 || || || || ||||| || |||| || Sbjct 4927 CAGAAGGAGTCCACACTTCA-CTTGGTT 4953 Score = 154 bits (170), Expect = 4e-32 Identities = 149/190 (78%), Gaps = 1/190 (1%) Strand=Plus/Minus Query 177942 CTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAA 178001 ||||| || || || ||||| || ||||||||| |||||||||||||| ||||| || Sbjct 299 CTCACCGGCAAGACCATCACTCTTGAGGTGGAATCATCAGACACCATCGACAACGTGAAG 240 Query 178002 CAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGA 178061 ||||| |||||||| || || ||||| ||||||||||| || |||||||||||||| Sbjct 239 ACGAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAGCAGCGCCTTATCTTCGCCGGC 180 Query 178062 AAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTG 178121 || ||| | || ||||| | |||||| | ||||| ||| |||| || || ||||| || Sbjct 179 AAGCAGTTGGAGGATGGCCGCACTCTTTCTGATTACAACATCCAGAAGGAGTCAACGCTT 120 Query 178122 CATCTTGTTT 178131 || |||| || Sbjct 119 CA-CTTGGTT 111 Score = 149 bits (164), Expect = 2e-30 Identities = 152/197 (77%), Gaps = 1/197 (1%) Strand=Plus/Plus Query 177932 CGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGA 177991 ||| || ||||| || || || || |||||||| ||||| || ||||||||||| || Sbjct 4527 CGTTAAGACTCTGACTGGCAAGACCATCACCCTTGAGGTTGAGTCTTCAGACACCATTGA 4586 Query 177992 GAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTAT 178051 || ||||| ||||| || ||||| || || || |||||||||||||| || || || Sbjct 4587 CAATGTCAAGACCAAGATCCAAGACAAGGAGGGCATTCCTCCGGACCAGCAGCGCCTCAT 4646 Query 178052 CTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGA 178111 ||||||||| || || ||||| || || | || ||| ||||||| ||| ||||||| || Sbjct 4647 CTTCGCCGGCAAGCAACTCGAGGACGGCCGCACCCTTTCCGATTACAACATCCAAAAGGA 4706 Query 178112 ATCAACACTGCATCTTG 178128 || |||||||| |||| Sbjct 4707 GTCCACACTGCA-CTTG 4722 Score = 131 bits (144), Expect = 4e-25 Identities = 148/197 (75%), Gaps = 1/197 (1%) Strand=Plus/Minus Query 177932 CGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGA 177991 ||| || ||||| || || || || |||||||||||||| || ||| |||||||| || Sbjct 781 CGTCAAGACTCTGACTGGCAAGACCATCACCCTCGAGGTTGAGTCCTCGGACACCATTGA 722 Query 177992 GAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTAT 178051 |||||||| |||||| || || || || || || |||||||||||||| || || || Sbjct 721 CAACGTCAAGACAAAGATCCAAGATAAGGAGGGCATTCCTCCGGACCAGCAGCGCCTCAT 662 Query 178052 CTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGA 178111 ||| ||||| || |||||||| || || | || | | || || ||| |||| || || Sbjct 661 CTTTGCCGGCAAGCAGCTCGAGGACGGCCGAACATTGTCGGACTACAACATCCAGAAGGA 602 Query 178112 ATCAACACTGCATCTTG 178128 || ||| |||| |||| Sbjct 601 GTCCACATTGCA-CTTG 586 Score = 122 bits (134), Expect = 2e-22 Identities = 120/155 (77%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || ||||| || || || ||||| || |||||||| ||| ||| Sbjct 4975 CAGATCTTCGTCAAGACGCTCACCGGCAAGACCATCACTCTTGAGGTGGAGTCCTCCGAC 5034 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| ||||| || ||||| |||||||| || || |||||||||||||| || Sbjct 5035 ACGATCGACAACGTGAAGACGAAGATCCAGGACAAGGAGGGCATCCCTCCGGACCAACAC 5094 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGG 178078 ||| | ||||||||||| || ||| | || ||||| Sbjct 5095 CGATTGATCTTCGCCGGCAAGCAGTTGGAGGATGG 5129 >seq6382 Length=53231 Score = 168 bits (186), Expect = 2e-36 Identities = 158/201 (79%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || || ||||| || || || ||||| |||||||||||| |||||| Sbjct 139 CAGATTTTCGTCAAGACCCTCACCGGCAAGACCATCACACTCGAGGTGGAATCATCAGAC 198 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || ||||| |||||||||||||| || || ||||| ||||||||||| Sbjct 199 ACCATCGACAATGTCAAGACGAAGATTCAGGACAAGGAGGGCATCCCCCCGGACCAGCAG 258 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||| | |||||||| || || |||||||||||||| | || ||| | || || ||| | Sbjct 259 CGATTGATCTTCGCGGGCAAGCAGCTCGAAGATGGCCGCACCCTTTCGGACTACAACATT 318 Query 178104 CAAAAAGAATCAACACTGCAT 178124 ||||| || || || || ||| Sbjct 319 CAAAAGGAGTCCACTCTTCAT 339 Score = 87.8 bits (96), Expect = 4e-12 Identities = 89/115 (77%), Gaps = 1/115 (1%) Strand=Plus/Plus Query 178014 GACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAA 178073 ||||| || || || ||||||||||| |||||| | ||||||||||| || ||| | || Sbjct 1 GACAAGGAGGGCATTCCTCCGGACCAACAACGATTGATCTTCGCCGGCAAGCAGTTGGAG 60 Query 178074 GATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTG 178128 ||||| | || ||| ||||||| ||| |||| || || || || || || |||| Sbjct 61 GATGGCCGCACCCTTTCCGATTACAACATCCAGAAGGAGTCCACTCTTCA-CTTG 114 >seq7298 Length=1044 Score = 158 bits (174), Expect = 3e-33 Identities = 159/207 (77%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || ||||| || || || ||||| ||||| || || ||| ||| Sbjct 329 CAGATCTTCGTCAAGACCCTCACCGGCAAGACAATCACACTCGAAGTTGAGTCCTCCGAC 270 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| |||||||| |||||||||||||| || || |||||||||||||| ||| Sbjct 269 ACTATCGACAACGTCAAGACCAAGATTCAGGACAAGGAGGGCATCCCTCCGGACCAACAA 210 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||| | ||||||||||| || ||||| ||||| ||| | || || | || || ||| || Sbjct 209 CGATTGATCTTCGCCGGCAAGCAGCTTGAAGACGGACGTACCCTCTCGGACTACAACATC 150 Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130 || || || || ||| ||||| | ||| Sbjct 149 CAGAAGGAGTCCACATTGCATTTGGTT 123 Score = 154 bits (170), Expect = 4e-32 Identities = 153/197 (78%), Gaps = 1/197 (1%) Strand=Plus/Minus Query 177932 CGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGA 177991 ||| || ||||| || || || || |||||||||||||| || ||| ||||||||||| Sbjct 549 CGTTAAGACTCTGACTGGCAAGACCATCACCCTCGAGGTTGAGTCCTCGGACACCATCGA 490 Query 177992 GAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTAT 178051 || ||||| ||||| || ||||| || || |||||||||||||| || || || || Sbjct 489 CAATGTCAAGACCAAGATCCAAGACAAGGAGGGCATCCCTCCGGACCAACAGCGTCTCAT 430 Query 178052 CTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGA 178111 ||||||||| || || ||||| || || | || ||| ||||||| ||| |||| || || Sbjct 429 CTTCGCCGGCAAGCAACTCGAGGACGGCCGCACCCTTTCCGATTACAACATCCAGAAGGA 370 Query 178112 ATCAACACTGCATCTTG 178128 || |||||||| |||| Sbjct 369 GTCCACACTGCA-CTTG 354 >seq8729 Length=33442 Score = 150 bits (166), Expect = 4e-31 Identities = 157/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || || || || || || |||||||||||||| || ||| ||| Sbjct 30057 CAGATCTTCGTCAAGACCCTTACTGGCAAGACCATCACCCTCGAGGTAGAGTCCTCCGAC 30116 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || |||||||| ||||| || ||||| || || ||||| || ||||| ||| Sbjct 30117 ACGATTGACAACGTCAAGACCAAGATCCAAGACAAGGAGGGCATCCCCCCAGACCAACAA 30176 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || ||||||||||| || | || || |||| || ||| || Sbjct 30177 CGTCTCATCTTCGCCGGCAAGCAGCTCGAAGACGGCCGAACGCTATCCGACTACAACATC 30236 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 ||||||||||| || || || || || Sbjct 30237 CAAAAAGAATCCACCCTCCACCTCGT 30262 >seq6491 Length=17318 Score = 150 bits (166), Expect = 4e-31 Identities = 159/207 (77%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || || || || || || ||||||||||||||||| || ||| Sbjct 5150 CAGATCTTCGTCAAGACCCTGACGGGTAAGACTATCACCCTCGAGGTGGAGTCTTCCGAC 5091 Query 177984 ACCATCGAGAACGTCAA-ACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCA 178042 ||||||| |||||| || ||| || |||||||| ||||| ||||| ||||||||||| Sbjct 5090 TCCATCGACGCCGTCAAGACCAAA-ATCCAGGACAAGGAAGGTATCCCCCCGGACCAGCA 5032 Query 178043 ACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGT 178102 ||||| ||||||||||| || |||||||| || || | |||||| | || || ||| | Sbjct 5031 GCGACTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGTACTCTTTCGGACTACAACAT 4972 Query 178103 CCAAAAAGAATCAACACTGCATCTTGT 178129 ||| || || || || || || || || Sbjct 4971 CCAGAAGGAGTCGACTCTCCACCTCGT 4945 >seq8196 Length=29145 Score = 136 bits (150), Expect = 1e-26 Identities = 149/197 (76%), Gaps = 1/197 (1%) Strand=Plus/Plus Query 177932 CGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGA 177991 ||| || || ||||| || || ||||||||||||||||| || || ||| ||||||| Sbjct 8599 CGTCAAGACCCTCACCGGCAAGACGATCACCCTCGAGGTCGAGTCGTCCGACTCCATCGA 8658 Query 177992 GAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTAT 178051 |||||| ||||| |||||||| ||||| || || |||||||| || || || || Sbjct 8659 CGCCGTCAAGACCAAGATCCAGGACAAGGAAGGTATTCCCCCGGACCAACAGCGTCTCAT 8718 Query 178052 CTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGA 178111 ||||||||| || |||||||| || || | ||||| |||| || ||| |||| || || Sbjct 8719 CTTCGCCGGCAAGCAGCTCGAGGACGGTCGCACTCTCTCCGACTACAACATCCAGAAGGA 8778 Query 178112 ATCAACACTGCATCTTG 178128 || || || || |||| Sbjct 8779 GTCCACTCTTCA-CTTG 8794 >seq4088 Length=15668 Score = 120 bits (132), Expect = 7e-22 Identities = 141/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || ||||| || || | ||||| || || || || ||||| Sbjct 8977 CAGATCTTCGTCAAGACACTCACCGGCAAGGCCATCACTCTTGAAGTCGATTCATCAGAT 9036 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| |||| | | ||||| |||||||| ||||| | |||||||||||| || Sbjct 9037 ACGATCGACAACGGCCAGACCAAGATCCAGGACAAGGAAGGCACCCCTCCGGACCAACAG 9096 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || |||||||||||||| || || ||||| || || | || || |||| || ||| || Sbjct 9097 CGCCTTATCTTCGCCGGCAAGCAACTCGAGGACGGCCGCACCCTCTCCGACTACAACATC 9156 Query 178104 CAAAAAGAATC 178114 || ||||| || Sbjct 9157 CAGAAAGAGTC 9167 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203595402193170