Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689965.1_202016-07-20] 8,805 sequences; 43,736,635 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq6491 149 6e-31 seq6382 143 2e-29 seq7298 141 9e-29 seq8196 140 3e-28 seq3785 132 4e-26 seq8729 127 2e-24 seq4088 113 4e-20 >seq6491 Length=17318 Score = 149 bits (164), Expect = 6e-31 Identities = 172/229 (75%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | ||| || || || || ||||||||| ||||| ||||| || Sbjct 4927 CCACCACGCAGGCGAAGCACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAA 4986 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || || |||| |||||||||||||||||||| || || ||||| ||||||| ||| Sbjct 4987 AGAGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGTCGCTGCTGGTCCGGGGGG 5046 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | ||||||||| |||||| ||| ||| || | | | |||| |||||||| Sbjct 5047 ATACCTTCCTTGTCCTGGATTTTGGTCTT-GACGGCGTCGATGGAGTCGGAAGACTCCAC 5105 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||| | || || || ||||||||||| ||||| ||||| ||||||||| Sbjct 5106 CTCGAGGGTGATAGTCTTACCCGTCAGGGTCTTGACGAAGATCTGCATG 5154 >seq6382 Length=53231 Score = 143 bits (158), Expect = 2e-29 Identities = 173/231 (75%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| | |||| ||| || ||| |||||| |||||||| ||||| || Sbjct 363 GCCACCACGGAGACGGAGGACCAAATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCCGA 304 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 |||||||| | || |||||||||||||| ||||| |||| ||||| ||||||| ||| Sbjct 303 AAGGGTGCGGCCATCTTCGAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCCGGGGG 244 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTG-CTT--CAACGACGACACAGTGTCGCTCGACTC 41811 | || |||||||||| ||| | || | ||| || | || | ||||| || || Sbjct 243 GATGCCCTCCTTGTCC-TGAATCTTCGTCTTGACATTGTCG--ATGGTGTCTGATGATTC 187 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||||| | || || || || || || || ||||| |||||||||||||| Sbjct 186 CACCTCGAGTGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAAATCTGCAT 136 Score = 111 bits (122), Expect = 1e-19 Identities = 105/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| ||||| | |||| || || ||| ||||||||| ||||| || ||||| Sbjct 134 CCACCGCGGAGACGGAGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCGGAA 75 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| | || || | ||||||||||||||| |||| || |||||||||| ||| Sbjct 74 AGGGTGCGGCCATCCTCCAACTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCCGGAGGA 15 Query 41756 ACGCTCTCCTTGTC 41769 | || ||||||||| Sbjct 14 ATGCCCTCCTTGTC 1 >seq7298 Length=1044 Score = 141 bits (156), Expect = 9e-29 Identities = 171/230 (74%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || || || | |||| ||||| ||| ||||||||| ||||| ||||| || Sbjct 105 GCCACCACGCAGGCGGAGAACCAAATGCAATGTGGACTCCTTCTGGATGTTGTAGTCCGA 164 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 |||||| || |||| || ||||||||||||||||| |||| || |||||||||| || Sbjct 165 GAGGGTACGTCCGTCTTCAAGCTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCCGGAGG 224 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | || |||||||||| ||| | || | | ||| | | | ||||||| ||||| | Sbjct 225 GATGCCCTCCTTGTCC-TGAATCTTGGTCTTGACGTTGTCGATAGTGTCGGAGGACTCAA 283 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 | || | || || || || || || || ||||| ||||| ||||||||| Sbjct 284 CTTCGAGTGTGATTGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATG 333 Score = 123 bits (136), Expect = 2e-23 Identities = 160/219 (73%), Gaps = 4/219 (2%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || || || | |||| ||||| ||| ||||||||| ||||| || ||||| Sbjct 333 GCCACCACGCAGGCGGAGGACCAAGTGCAGTGTGGACTCCTTCTGGATGTTGTAATCGGA 392 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 |||||||| |||| ||||| |||||||||||||| || || ||||||||||||| || Sbjct 393 AAGGGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATGAGACGCTGTTGGTCCGGAGG 452 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCC 41812 | || ||||||||| ||| || ||| || | || | ||||| ||||| Sbjct 453 GATGCCCTCCTTGTCTTGGATCTTGGTCTTGACATTGTCG--ATGGTGTCCGAGGACTCA 510 Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACG 41851 ||||| | || || || || || ||||| ||||| ||| Sbjct 511 ACCTCGAGGGTGATGGTCTTGCCAGTCAGAGTCTTAACG 549 >seq8196 Length=29145 Score = 140 bits (154), Expect = 3e-28 Identities = 152/199 (76%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 |||| || || ||| ||||||||| ||||| ||||||||||| ||||| |||| ||| Sbjct 8796 ACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGACCGTCCTCG 8737 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 ||||||||||||||||| || || ||||||||||||| ||||| | ||||||||| | Sbjct 8736 AGCTGCTTGCCGGCGAAGATGAGACGCTGTTGGTCCGGGGGAATACCTTCCTTGTCCTGG 8677 Query 41774 ATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTT 41832 || || ||| ||| || | | | |||| |||||| ||||| | || ||||| || Sbjct 8676 ATCTTGGTCTT-GACGGCGTCGATGGAGTCGGACGACTCGACCTCGAGGGTGATCGTCTT 8618 Query 41833 ACCCGTCAGCGTCTTTACG 41851 || || || ||||| ||| Sbjct 8617 GCCGGTGAGGGTCTTGACG 8599 >seq3785 Length=5141 Score = 132 bits (146), Expect = 4e-26 Identities = 168/229 (73%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| ||||| | |||| || || ||| ||||||||| ||||| ||||||||| Sbjct 4970 CCACCGCGGAGACGGAGAACCAAGTGAAGTGTGGACTCCTTCTGGATGTTGTAGTCGGAG 4911 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| || |||| ||||||||||| |||||||| || |||||||| ||||||| || Sbjct 4910 AGGGTTCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATAAGGCGCTGCTGGTCCGGAGGG 4851 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCA 41813 | || ||||||||| ||| || ||| || | || | ||||| || || | Sbjct 4850 ATGCCCTCCTTGTCTTGGATCTTGGTCTTGACATTGTCG--ATCGTGTCTGATGATTCAA 4793 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 | || | || || || || || || || ||||| ||||| |||||||| Sbjct 4792 CTTCGAGTGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 4744 Score = 129 bits (142), Expect = 5e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| ||||| | |||| || ||||| ||||||||| ||||| || || || Sbjct 338 CCACCGCGCAGACGAAGAACCAAGTGAAGCGTTGACTCCTTCTGGATGTTGTAATCAGAA 397 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| | || || | ||||||||||||||| || |||||||| ||||||| ||| Sbjct 398 AGAGTGCGGCCATCCTCCAACTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCCGGGGGG 457 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | |||||||||| ||| || |||| ||| | | | ||||| || ||||| Sbjct 458 ATACCCTCCTTGTCCTGGATCTTCGTCTTC-ACGTTGTCGATGGTGTCTGATGATTCCAC 516 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||| | || || || || || || || ||||| ||||| |||||||| Sbjct 517 CTCAAGAGTGATGGTCTTGCCGGTGAGAGTCTTCACGAAGATCTGCAT 564 Score = 118 bits (130), Expect = 1e-21 Identities = 158/217 (73%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | |||| ||||| ||| |||||| || ||||| || ||||| Sbjct 4742 CCACCACGCAGGCGGAGGACCAAGTGCAGTGTGGACTCCTTTTGGATGTTGTAATCGGAA 4683 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| |||| ||||| |||||||||||||| || |||||||| ||||||| ||| Sbjct 4682 AGGGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGAGGA 4623 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || ||||||||| ||| || ||| || | | | ||||| ||||| || Sbjct 4622 ATGCCCTCCTTGTCTTGGATCTTGGTCTT-GACATTGTCAATGGTGTCTGAAGACTCAAC 4564 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACG 41851 ||| | || || || || || ||||| ||||| ||| Sbjct 4563 CTCAAGGGTGATGGTCTTGCCAGTCAGAGTCTTAACG 4527 Score = 109 bits (120), Expect = 5e-19 Identities = 156/217 (72%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | |||| |||| ||| ||||||||| ||||| ||||| || Sbjct 566 CCACCACGCAGGCGGAGGACCAAGTGCAATGTGGACTCCTTCTGGATGTTGTAGTCCGAC 625 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | || || |||| ||||||||||||||||| || || |||||||| ||||||| ||| Sbjct 626 AATGTTCGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCCGGAGGA 685 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||| || ||| ||| ||| ||| | | | ||||| ||||| || Sbjct 686 ATGCCCTCCTTATCTTGGATCTTTGTCTT-GACGTTGTCAATGGTGTCCGAGGACTCAAC 744 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACG 41851 ||| | || || || || || ||||| ||||| ||| Sbjct 745 CTCGAGGGTGATGGTCTTGCCAGTCAGAGTCTTGACG 781 Score = 107 bits (118), Expect = 2e-18 Identities = 128/171 (75%), Gaps = 2/171 (1%) Strand=Plus/Minus Query 41693 GAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCG 41752 || |||||||| | || || | ||||||||||||||| |||| || |||||||||| Sbjct 5141 GAAAGGGTGCGGCCATCCTCCAACTGCTTGCCGGCGAAGATCAATCGGTGTTGGTCCGGA 5082 Query 41753 GGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTC 41811 || | || |||||||||| ||| || |||| ||| | | | |||||| ||||| Sbjct 5081 GGGATGCCCTCCTTGTCCTGGATCTTCGTCTTC-ACGTTGTCGATCGTGTCGGAGGACTC 5023 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||||| | || || || || || || |||||||| ||||| |||||||| Sbjct 5022 CACCTCAAGAGTGATGGTCTTGCCGGTGAGCGTCTTGACGAAGATCTGCAT 4972 Score = 105 bits (116), Expect = 6e-18 Identities = 114/151 (75%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| ||||| | |||| || ||||| ||||||||| ||||| || || || Sbjct 94 CCACCGCGCAGACGAAGAACCAAGTGAAGCGTTGACTCCTTCTGGATGTTGTAATCAGAA 153 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| | || || | ||||||||||||||| || |||||||| ||||||| ||| Sbjct 154 AGAGTGCGGCCATCCTCCAACTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCCGGGGGG 213 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCA 41786 | | |||||||||| ||| || ||||| Sbjct 214 ATACCCTCCTTGTCCTGGATCTTCGTCTTCA 244 >seq8729 Length=33442 Score = 127 bits (140), Expect = 2e-24 Identities = 167/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 ||||| || ||||| | || || || || ||| || || || ||||| |||||||| Sbjct 30280 CCGCCACGGAGACGGAGGACGAGGTGGAGGGTGGATTCTTTTTGGATGTTGTAGTCGGAT 30221 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || || |||| |||||||||||||||||||| || || || |||||||| | ||| Sbjct 30220 AGCGTTCGGCCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGTTGGTCTGGGGGG 30161 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || ||||||||| ||| || ||| ||| | | | |||||| ||||| || Sbjct 30160 ATGCCCTCCTTGTCTTGGATCTTGGTCTT-GACGTTGTCAATCGTGTCGGAGGACTCTAC 30102 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||| | || || || || || || || ||||| ||||| ||||||||| Sbjct 30101 CTCGAGGGTGATGGTCTTGCCAGTAAGGGTCTTGACGAAGATCTGCATG 30053 >seq4088 Length=15668 Score = 113 bits (124), Expect = 4e-20 Identities = 111/143 (78%), Gaps = 3/143 (2%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 ||||| || ||||| | || || || || | ||| ||||| ||||| ||||||||| Sbjct 9197 CCGCCACGCAGACGAAGGACAAGGTGGAGAGA---CTCTTTCTGGATGTTGTAGTCGGAG 9141 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| |||| ||||| |||||||||||||| || |||||||||||||||| || Sbjct 9140 AGGGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATAAGGCGCTGTTGGTCCGGAGGG 9081 Query 41756 ACGCTCTCCTTGTCCATGATTTT 41778 || ||||||||| ||| || Sbjct 9080 GTGCCTTCCTTGTCCTGGATCTT 9058 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462253117666000