Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689995.1_202016-07-20] 366 sequences; 37,460,344 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq2 123 2e-23 seq296 109 5e-19 seq359 105 6e-18 seq312 95.1 1e-14 >seq2 Length=120822 Score = 123 bits (136), Expect = 2e-23 Identities = 155/210 (74%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||| | || ||||| || || |||||||||||| | ||||| |||||| Sbjct 7518 ACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCATCCTCC 7577 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGT-CTGT 118648 | ||| || || ||| |||| | ||||| ||||| ||||| ||||||||||||| ||| Sbjct 7578 AACTGCTTGCCGGCGAAGATCAATCGCTGTTGATCCGGAGGAATGCCCTCCTTGTCCTGG 7637 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 | || | ||| || | |||| ||||| | ||||||||| |||| || | || || Sbjct 7638 ATCTTGGTCTTT-ACATTGTCGATCGTGTCTGAGCTCTCGACTTCGAGAGTGATAGTCTT 7696 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||||| || || || || || |||||||| Sbjct 7697 GCCGGTGAGGGTCTTGACGAAGATCTGCAT 7726 Score = 122 bits (134), Expect = 8e-23 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||| | ||| ||||| ||||| |||||||||||| | ||||| |||||| Sbjct 11858 ACCAAGTGCAGTGTGGACTCCTTTTGGATGTTGTAATCGGAAAGGGTGCGGCCGTCCTCG 11799 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 || || || || ||| ||||||| |||||||| || ||||| ||||||||||||||| Sbjct 11798 AGTTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCTTGG 11739 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | || | |||||| | ||| ||||| | ||| | || ||| Sbjct 11738 ATCTTGGTCTTGACATTGTCAATGGTGTCTGAAGACTCAACCTCAAGGGTGATGGTCTTG 11679 Query 118710 CCGGTCAGAGTTTTTAC 118726 || |||||||| || || Sbjct 11678 CCAGTCAGAGTCTTAAC 11662 Score = 114 bits (126), Expect = 1e-20 Identities = 153/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||| | || ||||| || || |||||||||||| | ||||| |||||| Sbjct 7062 ACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCATCCTCC 7121 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGT-CTGT 118648 | ||| || || ||| |||| | || || || || ||||| ||||||||||||| ||| Sbjct 7122 AACTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGG 7181 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 | || | ||| || | |||| ||||| | |||||| ||||| | || | || || Sbjct 7182 ATCTTGGTCTTT-ACATTGTCGATCGTGTCGGAGCTCTCCACCTCAAGAGTGATGGTCTT 7240 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||||| || || || || ||||||||||| Sbjct 7241 GCCGGTGAGGGTCTTGACGAAAATCTGCAT 7270 Score = 114 bits (126), Expect = 1e-20 Identities = 153/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||| | || ||||| || || |||||||||||| | ||||| |||||| Sbjct 7290 ACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCATCCTCC 7349 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGT-CTGT 118648 | ||| || || ||| |||| | || || || || ||||| ||||||||||||| ||| Sbjct 7350 AACTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGG 7409 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 | || | ||| || | |||| ||||| | |||||| ||||| | || | || || Sbjct 7410 ATCTTGGTCTTT-ACATTGTCGATCGTGTCGGAGCTCTCCACCTCAAGAGTGATGGTCTT 7468 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||||| || || || || ||||||||||| Sbjct 7469 GCCGGTGAGGGTCTTGACGAAAATCTGCAT 7498 Score = 113 bits (124), Expect = 4e-20 Identities = 144/197 (73%), Gaps = 1/197 (1%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||| | ||| ||||| || || |||||||| ||| | || || |||||| Sbjct 7746 ACCAAGTGCAATGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCCTCG 7805 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| ||||| ||| |||| ||||||||||| || ||||| ||||||||||| ||| Sbjct 7806 AGCTGCTTTCCGGCGAAGATAAGACGCTGCTGGTCCGGAGGAATGCCCTCCTTATCTTGG 7865 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || ||| || || | || | |||||| | | ||| ||||| | ||| | || ||| Sbjct 7866 ATCTTTGTCTTGACGTTGTCAATGGTGTCGGAGGACTCAACCTCAAGGGTGATGGTCTTG 7925 Query 118710 CCGGTCAGAGTTTTTAC 118726 | |||||||| || || Sbjct 7926 -CAGTCAGAGTCTTGAC 7941 Score = 113 bits (124), Expect = 4e-20 Identities = 156/212 (74%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||| | || ||||| || || ||||||||||| | |||||| ||||| Sbjct 12542 ACCAAGTGAAGCGTTGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCGTCCTCC 12483 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGT-CTGT 118648 | ||| || || ||| ||||||| |||||||| || ||||| ||||||||||||| ||| Sbjct 12482 AACTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGG 12423 Query 118649 AATTTTTTGT-TTAACCTGTTCGACGGTGTCCG-TGCTCTCGACCTCGACGGTCACCGTT 118706 | | || || || || | |||| ||||| | || | || ||||||| || | || Sbjct 12422 A--TCTTCGTCTTCACGTTGTCGATAGTGTCTGATGAT-TCCACCTCGAGTGTGATGGTC 12366 Query 118707 TTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||||||| || || || || || |||||||| Sbjct 12365 TTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 12334 Score = 109 bits (120), Expect = 5e-19 Identities = 153/211 (73%), Gaps = 3/211 (1%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAG-TGCGCGTATCCTC 118588 |||||||| | ||| ||||| || || |||||||| ||| | | | || ||||| Sbjct 12087 ACCAAGTGCAATGTGGACTCCTTCTGGATGTTGTAGTCGGAGAAGGGTTCGGCCGTCCTC 12028 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 |||||| ||||| ||| |||| || |||||||| || ||||| ||||||||||||||| Sbjct 12027 GAGCTGCTTTCCGGCGAAGATAAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCTTG 11968 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCGACCTCGACGGTCACCGTTT 118707 || || || || | |||| ||||| | || | || || |||| || | || | Sbjct 11967 GATCTTGGTCTTGACATTGTCGATCGTGTCTGATGAT-TCAACTTCGAGTGTGATGGTCT 11909 Query 118708 TGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||||| || || || || || |||||||| Sbjct 11908 TGCCGGTGAGGGTCTTGACGAAGATCTGCAT 11878 Score = 102 bits (112), Expect = 7e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 ||||| || | ||| ||||| ||||| |||||||| || | ||| || || ||| Sbjct 12770 ACCAAATGAAGTGTGGACTCCTTTTGGATGTTGTAGTCAGAGAGAGTACGTCCGTCTTCG 12711 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| || || ||| |||| | || || || || ||||| |||||||||||||| | Sbjct 12710 AGCTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGA 12651 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | |||| |||||| | |||||| || | ||| | || ||| Sbjct 12650 ATCTTGGTCTTCACATTGTCGATGGTGTCTGAAGACTCGACTTCAAGGGTGATTGTCTTG 12591 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||| || || || || || |||||||| Sbjct 12590 CCGGTGAGGGTCTTGACGAAGATCTGCAT 12562 Score = 98.7 bits (108), Expect = 9e-16 Identities = 150/210 (71%), Gaps = 3/210 (1%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 ||||| || | || ||||| |||||||||||||| || | ||||| || ||| Sbjct 6835 ACCAAATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCCGAAAGGGTGCGGCCGTCTTCG 6894 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| || || ||| |||| | || ||||| || || || |||||||||||||| | Sbjct 6895 AGCTGCTTGCCCGCGAAGATCAATCGTTGCTGGTCCGG-GGGATGCCCTCCTTGTCCTGA 6953 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCGACCTCGACGGTCACCGTTTT 118708 || || || || | || | |||||| | || | || ||||||| || | || || Sbjct 6954 ATCTTCGTCTTGACATTGTCAATGGTGTCTGATGAT-TCCACCTCGAGTGTGATGGTCTT 7012 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||||| || || || || ||||||||||| Sbjct 7013 GCCGGTGAGGGTCTTGACGAAAATCTGCAT 7042 Score = 89.7 bits (98), Expect = 4e-13 Identities = 143/204 (70%), Gaps = 1/204 (0%) Strand=Plus/Minus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||| | ||| ||||| || || |||||||| ||| | ||||| ||||| | ||| Sbjct 12309 GTGAAGTGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCCAACTG 12250 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654 || || ||| ||||||| ||||| || || || || || |||||||||||| || || Sbjct 12249 CTTGCCGGCGAAGATGAGGCGCTGTTGGTCCGGGGG-ATACCCTCCTTGTCTTGGATCTT 12191 Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714 || || | |||| ||||| | | |||||| || | || | || |||||||| Sbjct 12190 CGTCTTCACGTTGTCGATCGTGTCTGAGGACTCGACTTCAAGAGTGATTGTCTTGCCGGT 12131 Query 118715 CAGAGTTTTTACAAAAATCTGCAT 118738 || || || || || |||||||| Sbjct 12130 GAGCGTCTTGACGAAGATCTGCAT 12107 >seq296 Length=257219 Score = 109 bits (120), Expect = 5e-19 Identities = 147/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| || || |||||||| |||||||| ||| | || || || |||||||| Sbjct 193596 GTGGAGGGTGGATTCTTTTTGGATGTTGTAGTCGGATAGCGTTCGGCCGTCTTCGAGCTG 193537 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654 || || ||| |||||||||| || || || || || ||||||||||||||| || || Sbjct 193536 CTTGCCGGCGAAGATGAGACGTTGTTGGTCTGGGGGGATGCCCTCCTTGTCTTGGATCTT 193477 Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714 || || | || | ||||| | | ||| ||||||| ||| | || ||||| || Sbjct 193476 GGTCTTGACGTTGTCAATCGTGTCGGAGGACTCTACCTCGAGGGTGATGGTCTTGCCTGT 193417 Query 118715 CAGAGTTTTTACAAAAATCTGCATG 118739 || || || ||||| ||||||||| Sbjct 193416 GAGTGTCTTGACAAAGATCTGCATG 193392 >seq359 Length=210429 Score = 105 bits (116), Expect = 6e-18 Identities = 145/199 (73%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||| | || ||||| || || |||||||| ||| | |||||| |||||| Sbjct 42513 ACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGACCGTCCTCG 42454 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGT-CTGT 118648 ||||| || || ||| ||||||||||||| || || || || || || ||||||| ||| Sbjct 42453 AGCTGCTTGCCGGCGAAGATGAGACGCTGTTGGTCCGGGGGGATACCTTCCTTGTCCTGG 42394 Query 118649 AATTTTTTGT-TTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTT 118707 | | || || || || |||| || ||| | ||||||||||| ||| | ||| | Sbjct 42393 A--TCTTGGTCTTGACGGCGTCGATGGAGTCGGACGACTCGACCTCGAGGGTGATCGTCT 42336 Query 118708 TGCCGGTCAGAGTTTTTAC 118726 ||||||| || || || || Sbjct 42335 TGCCGGTGAGGGTCTTGAC 42317 >seq312 Length=215048 Score = 95.1 bits (104), Expect = 1e-14 Identities = 151/213 (71%), Gaps = 4/213 (2%) Strand=Plus/Minus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||| | ||||| || ||||| || || |||||||| || | ||| || ||||| Sbjct 143697 CACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGGCCGTCCTC 143638 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGT-CTG 118647 |||||| || || ||| ||||||| ||||| || || || || || || ||||||| ||| Sbjct 143637 GAGCTGCTTGCCGGCGAAGATGAGTCGCTGTTGGTCCGGTGGGATACCTTCCTTGTCCTG 143578 Query 118648 TAATTTTTTGT-TTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTT 118706 | |||| || || || |||| || ||| | ||| ||||||| ||| | || Sbjct 143577 GA--TTTTGGTCTTGACGGCGTCGATGGAGTCGGAAGACTCCACCTCGAGGGTGATAGTC 143520 Query 118707 TTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 || || ||||| || || || || ||||||||| Sbjct 143519 TTACCCGTCAGGGTCTTGACGAAGATCTGCATG 143487 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433828464845272