Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689995.1_202016-07-20] 366 sequences; 37,460,344 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq296 131 1e-25 seq2 125 5e-24 seq327 109 4e-19 seq312 102 5e-17 seq359 100 2e-16 >seq296 Length=257219 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 ||||| || || | || || ||||| | || |||||| || |||||||||||||| Sbjct 193619 CCGCCACGGAGACGGAGGACGAGGTGGAGGGTGGATTCTTTTTGGATGTTGTAGTCGGAT 193560 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 ||| ||| |||| || | ||||||||| ||||| ||||| || || ||||| ||| Sbjct 193559 AGCGTTCGGCCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGTTGGTCTGGGGGG 193500 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| ||||| ||| | | | | |||| |||| || || || Sbjct 193499 ATGCCCTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCAATCGTGTCGGAGGACTCTACC 193440 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | |||||||| ||||| ||||| || || |||||||||||||| Sbjct 193439 TCGAGGGTGATGGTCTTGCCTGTGAGTGTCTTGACAAAGATCTGCAT 193393 >seq2 Length=120822 Score = 125 bits (138), Expect = 5e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || |||||||| | || |||| ||| | || || ||||| |||||||| || || Sbjct 12560 CCACCGCGCAGACGAAGAACCAAGTGAAGCGTTGACTCCTTCTGGATGTTGTAATCAGAA 12501 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| |||| |||||||||||||| ||||| ||||| ||||||||||| || Sbjct 12500 AGAGTGCGGCCGTCCTCCAACTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGAGGA 12441 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| ||||| ||| | | | | || | || | ||||| || Sbjct 12440 ATGCCCTCCTTGTCCTGGATCTTCGTCTTCACGTTGTCGATAGTGTCTGATGATTCCACC 12381 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | |||||||| ||||||||||| || || || ||||||||||| Sbjct 12380 TCGAGTGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 12334 Score = 122 bits (134), Expect = 6e-23 Identities = 164/227 (72%), Gaps = 1/227 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || ||||| || | || || ||||| | || || ||||| |||||||||||||| Sbjct 12332 CCACCGCGGAGACGGAGAACAAGGTGAAGTGTGGACTCCTTCTGGATGTTGTAGTCGGAG 12273 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| |||| |||||||||||||| ||||| ||||| ||||| ||||| ||| Sbjct 12272 AGGGTGCGGCCGTCCTCCAACTGCTTGCCGGCGAAGATGAGGCGCTGTTGGTC-CGGGGG 12214 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | ||||||||| ||||| ||| | | | | |||| || | || ||||| Sbjct 12213 ATACCCTCCTTGTCTTGGATCTTCGTCTTCACGTTGTCGATCGTGTCTGAGGACTCGACT 12154 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | ||||| || ||||||||||| || || || ||||||||||| Sbjct 12153 TCAAGAGTGATTGTCTTGCCGGTGAGCGTCTTGACGAAGATCTGCAT 12107 Score = 114 bits (126), Expect = 8e-21 Identities = 154/213 (72%), Gaps = 1/213 (0%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGA-CGGTCGTC 34236 || |||| ||| || || || ||||| |||||||||||||| | | ||| |||| Sbjct 12090 AGAACCAAGTGCAATGTGGACTCCTTCTGGATGTTGTAGTCGGAGAAGGGTTCGGCCGTC 12031 Query 34237 GTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTC 34296 || | |||||| || ||||| || || ||||||||||| || | || ||||||||| Sbjct 12030 CTCGAGCTGCTTTCCGGCGAAGATAAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTC 11971 Query 34297 GGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGT 34356 ||||| ||| | || | | |||| || | ||||| || || | |||||||| Sbjct 11970 TTGGATCTTGGTCTTGACATTGTCGATCGTGTCTGATGATTCAACTTCGAGTGTGATGGT 11911 Query 34357 TTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 ||||||||||| || || || ||||||||||| Sbjct 11910 CTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 11878 Score = 107 bits (118), Expect = 1e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || ||||| || | || |||| ||| | ||| || ||||| |||||||| ||||| Sbjct 7044 CCACCGCGGAGACGGAGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCGGAA 7103 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || |||||||||||||| ||||| || | || || ||||| || Sbjct 7104 AGGGTGCGGCCATCCTCCAACTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCCGGAGGA 7163 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| ||||| ||||| || | | |||| |||| || || Sbjct 7164 ATGCCCTCCTTGTCCTGGATCTTGGTCTTTACATTGTCGATCGTGTCGGAGCTCTCCACC 7223 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | |||||||| ||||||||||| || || || || |||||||| Sbjct 7224 TCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAAATCTGCAT 7270 Score = 107 bits (118), Expect = 1e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || ||||| || | || |||| ||| | ||| || ||||| |||||||| ||||| Sbjct 7272 CCACCGCGGAGACGGAGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCGGAA 7331 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || |||||||||||||| ||||| || | || || ||||| || Sbjct 7332 AGGGTGCGGCCATCCTCCAACTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCCGGAGGA 7391 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| ||||| ||||| || | | |||| |||| || || Sbjct 7392 ATGCCCTCCTTGTCCTGGATCTTGGTCTTTACATTGTCGATCGTGTCGGAGCTCTCCACC 7451 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | |||||||| ||||||||||| || || || || |||||||| Sbjct 7452 TCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAAATCTGCAT 7498 Score = 107 bits (118), Expect = 1e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || ||||| || | || |||| ||| | ||| || ||||| |||||||| ||||| Sbjct 7500 CCACCGCGGAGACGGAGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCGGAA 7559 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || |||||||||||||| ||||| || | ||||| || || || Sbjct 7560 AGGGTGCGGCCATCCTCCAACTGCTTGCCGGCGAAGATCAATCGCTGTTGATCCGGAGGA 7619 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| ||||| ||||| || | | |||| || | ||||| Sbjct 7620 ATGCCCTCCTTGTCCTGGATCTTGGTCTTTACATTGTCGATCGTGTCTGAGCTCTCGACT 7679 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | ||||| || ||||||||||| || || || ||||||||||| Sbjct 7680 TCGAGAGTGATAGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 7726 Score = 98.7 bits (108), Expect = 6e-16 Identities = 137/191 (72%), Gaps = 1/191 (1%) Strand=Plus/Plus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || || || ||||||||||| || || ||| |||| || | ||||||||| ||||| Sbjct 6853 TCCTTTTGAATGTTGTAGTCCGAAAGGGTGCGGCCGTCTTCGAGCTGCTTGCCCGCGAAG 6912 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 || | || |||||||| ||| | || ||||||||| ||||| ||| | || | Sbjct 6913 ATCAATCGTTGCTGGTCCGGGGG-ATGCCCTCCTTGTCCTGAATCTTCGTCTTGACATTG 6971 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | || | || | ||||| || || | |||||||| ||||||||||| || || || Sbjct 6972 TCAATGGTGTCTGATGATTCCACCTCGAGTGTGATGGTCTTGCCGGTGAGGGTCTTGACG 7031 Query 34379 AAGATCTGCAT 34389 || |||||||| Sbjct 7032 AAAATCTGCAT 7042 Score = 93.3 bits (102), Expect = 3e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || || || ||||||||||| || || ||| |||| || | ||||||||| ||||| Sbjct 12752 TCCTTTTGGATGTTGTAGTCAGAGAGAGTACGTCCGTCTTCGAGCTGCTTGCCGGCGAAG 12693 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 || | || || ||||| || | || ||||||||| ||||| ||| | || | Sbjct 12692 ATCAATCGTTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGAATCTTGGTCTTCACATTG 12633 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | || | || | || ||||| || | ||||| || ||||||||||| || || || Sbjct 12632 TCGATGGTGTCTGAAGACTCGACTTCAAGGGTGATTGTCTTGCCGGTGAGGGTCTTGACG 12573 Query 34379 AAGATCTGCAT 34389 ||||||||||| Sbjct 12572 AAGATCTGCAT 12562 Score = 86.0 bits (94), Expect = 4e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | || |||| ||| | || || || || |||||||| ||||| Sbjct 11876 CCACCACGCAGGCGGAGGACCAAGTGCAGTGTGGACTCCTTTTGGATGTTGTAATCGGAA 11817 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| |||| || | |||||||| ||||| ||||| ||||||||||| || Sbjct 11816 AGGGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGAGGA 11757 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| ||||| ||| | || | | || | || | || || || Sbjct 11756 ATGCCCTCCTTGTCTTGGATCTTGGTCTTGACATTGTCAATGGTGTCTGAAGACTCAACC 11697 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377 || | |||||||| ||||| || ||||| || || Sbjct 11696 TCAAGGGTGATGGTCTTGCCAGTCAGAGTCTTAAC 11662 Score = 82.4 bits (90), Expect = 5e-11 Identities = 139/200 (70%), Gaps = 1/200 (1%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || |||| ||| || || || ||||| |||||||||||||| || ||| |||| Sbjct 7743 AGAACCAAGTGCAATGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCC 7802 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | |||||| || ||||| || || ||||||||||| || | || |||||| || Sbjct 7803 TCGAGCTGCTTTCCGGCGAAGATAAGACGCTGCTGGTCCGGAGGAATGCCCTCCTTATCT 7862 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 |||||| ||| | | | | || | |||| || || || || | |||||||| Sbjct 7863 TGGATCTTTGTCTTGACGTTGTCAATGGTGTCGGAGGACTCAACCTCAAGGGTGATGGTC 7922 Query 34358 TTGCCGGTGAGAGTTTTCAC 34377 ||| | || ||||| || || Sbjct 7923 TTG-CAGTCAGAGTCTTGAC 7941 >seq327 Length=173597 Score = 109 bits (120), Expect = 4e-19 Identities = 164/229 (72%), Gaps = 7/229 (3%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 ||||| ||||| | || || ||||| | || ||| ||||||| |||||||||||||| Sbjct 94568 CCGCCACGCAGACGAAGGACAAGGTGGAGAG-ACT--CTTTCTGGATGTTGTAGTCGGAG 94512 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC--GACGG 34280 || ||| |||| || | |||||||| ||||| || || ||||| ||||| || || Sbjct 94511 AGGGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATAAGGCGCTGTTGGTCCGGAGGG 94452 Query 34281 GCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGA 34340 | || |||||||| ||||| || | | | |||| ||| | || |||| Sbjct 94451 G--TGCCTTCCTTGTCCTGGATCTTGGTCTGGCCGTTGTCGATCGTATCTGATGAATCGA 94394 Query 34341 CGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 | || | ||||||| ||||||||||| || || || ||||||||||| Sbjct 94393 CTTCAAGAGTGATGGCCTTGCCGGTGAGTGTCTTGACGAAGATCTGCAT 94345 >seq312 Length=215048 Score = 102 bits (112), Expect = 5e-17 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | ||||| ||||| | ||| || ||||| ||||||||||| || Sbjct 143714 CCACCACGCAGGCGAAGCACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAA 143655 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || |||| |||| || | ||||||||| ||||| ||||| ||||| ||||| || Sbjct 143654 AGAGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGTCGCTGTTGGTCCGGTGGG 143595 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTG--CTTTAGATCGGCTATCGAATCGGTCGATTCGA 34340 | | |||||||| || ||||| ||| | || | || || |||| || || | Sbjct 143594 ATACCTTCCTTGTC--CTGGATTTTGGTCTTGACGGCGTCGATGGAGTCGGAAGACTCCA 143537 Query 34341 CGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 | || | ||||| || || || || || || || || ||||||||||| Sbjct 143536 CCTCGAGGGTGATAGTCTTACCCGTCAGGGTCTTGACGAAGATCTGCAT 143488 >seq359 Length=210429 Score = 100 bits (110), Expect = 2e-16 Identities = 142/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || |||| ||| | ||| || ||||| |||||||||||||| || || |||| Sbjct 42516 AGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGACCGTCC 42457 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | ||||||||| ||||| ||||| ||||| ||||| ||| | | |||||||| Sbjct 42456 TCGAGCTGCTTGCCGGCGAAGATGAGACGCTGTTGGTCCGGGGGGATACCTTCCTTGTCC 42397 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||| | || | || || |||| ||| ||||| || | ||||| || Sbjct 42396 TGGATCTTGGTCTTGACGGCGTCGATGGAGTCGGACGACTCGACCTCGAGGGTGATCGTC 42337 Query 34358 TTGCCGGTGAGAGTTTTCAC 34377 ||||||||||| || || || Sbjct 42336 TTGCCGGTGAGGGTCTTGAC 42317 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323070558896960