Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689995.1_202016-07-20] 366 sequences; 37,460,344 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq198 147 3e-30 seq32 120 4e-22 >seq198 Length=283761 Score = 147 bits (162), Expect = 3e-30 Identities = 185/252 (73%), Gaps = 3/252 (1%) Strand=Plus/Minus Query 49956 CAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGT 50015 ||| || || || ||| ||||||||||||||||| || || || |||||||| || || Sbjct 154251 CAAGCAAGCAAAGTCGGTGTGCAGACCCTCGTCTCGGCTGATGAGCTCGTTGGAGAAGGT 154192 Query 50016 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAA 50075 ||| |||||||| || |||||||| || ||||| || ||||| || || || || || || Sbjct 154191 GAGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAAGAGCCGGAGAA 154132 Query 50076 GAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCG--CT-GTC 50132 |||||| || ||||| || ||||||||||| || | ||| || || ||| | || ||| Sbjct 154131 GAAGATGCCCTCTACGGCAGCAAAGGCAACCAGGCGCTCGGCAAAAGTGGAGTCCTCGTC 154072 Query 50133 ATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGC 50192 | ||||| | ||||| |||||||| | || || || || || || ||||| Sbjct 154071 GTTGATCCAGCGCAGGGCCCACTCGGCCTTTTGCTTGACGACGGGAATGGTCTCCATGGC 154012 Query 50193 ATTAAAGAGATA 50204 | ||||| || Sbjct 154011 GTCGAAGAGGTA 154000 >seq32 Length=96279 Score = 120 bits (132), Expect = 4e-22 Identities = 216/316 (68%), Gaps = 0/316 (0%) Strand=Plus/Minus Query 79861 TCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGAC 79920 ||||||||||| || | ||||| | | || || || || | || ||||||| |||| Sbjct 32311 TCGAACTCGTCGCCGTAGACATCAGCGAGACCGGGGCACTCAGCGGGGCACATCAGCGAC 32252 Query 79921 CACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 79980 |||||||| | | | ||||| ||||| || | ||||| |||||||| || || Sbjct 32251 CACTCTCCGTTCTGTTCGACTCGCTTCATGAACAAGTCAGGGATCCAAAGGGCGTAGAAG 32192 Query 79981 AGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 80040 || || | || || |||||| || || ||||| | || ||||||||| | | Sbjct 32191 AGCTCACGGGCTCGGACCTCCTCCTTGCCGTGGTTCTTCCTGAGGTCGAGGAACTCGAAG 32132 Query 80041 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCC 80100 | ||||| ||||| || || | ||| ||||| | | || || || ||||| || ||| Sbjct 32131 ACGTCAGAGTGCCAGGGCTCAATGTAGATGGCGAAGGCACCTGGACGCTTGTTGCCACCC 32072 Query 80101 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 80160 ||||| | ||| | ||||||||| || | || | | ||| || | ||||| || || Sbjct 32071 TGATCGACGTAGCGAGCGGTGTTGTTGAAGACGCGAAGCATAGGCACGATACCGTTAGAG 32012 Query 80161 GTACCATTGGTCCCGG 80176 ||| || || |||| Sbjct 32011 ACACCGTTAGTTCCGG 31996 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718265513920240