Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689995.1_202016-07-20] 366 sequences; 37,460,344 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq198 120 4e-22 seq32 111 2e-19 >seq198 Length=283761 Score = 120 bits (132), Expect = 4e-22 Identities = 116/149 (78%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 42061 CAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGT 42120 ||| || || || ||| |||||||||||| |||| || || | |||||||| || || Sbjct 154251 CAAGCAAGCAAAGTCGGTGTGCAGACCCTCGTCTCGGCTGATGAGCTCGTTGGAGAAGGT 154192 Query 42121 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAA 42180 ||| |||||||| || |||||||| || ||||| || || || || || || || || || Sbjct 154191 GAGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAAGAGCCGGAGAA 154132 Query 42181 GAAGATTCCTTCTACTGCCGCAAAGGCAA 42209 |||||| || ||||| || |||||||||| Sbjct 154131 GAAGATGCCCTCTACGGCAGCAAAGGCAA 154103 >seq32 Length=96279 Score = 111 bits (122), Expect = 2e-19 Identities = 214/316 (68%), Gaps = 0/316 (0%) Strand=Plus/Minus Query 71944 TCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACACATCAATGAC 72003 ||||||||||| || | ||| | | || || || ||| || ||||||| ||| Sbjct 32311 TCGAACTCGTCGCCGTAGACATCAGCGAGACCGGGGCACTCAGCGGGGCACATCAGCGAC 32252 Query 72004 CACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 72063 |||||||| | | | ||||| ||||| || | ||||| |||||||| || || Sbjct 32251 CACTCTCCGTTCTGTTCGACTCGCTTCATGAACAAGTCAGGGATCCAAAGGGCGTAGAAG 32192 Query 72064 AGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 72123 || || | || || |||||| || || ||||| | || ||||||||| | | Sbjct 32191 AGCTCACGGGCTCGGACCTCCTCCTTGCCGTGGTTCTTCCTGAGGTCGAGGAACTCGAAG 32132 Query 72124 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCC 72183 | ||||| ||||| || || | ||| ||||| | | || || || ||||| || ||| Sbjct 32131 ACGTCAGAGTGCCAGGGCTCAATGTAGATGGCGAAGGCACCTGGACGCTTGTTGCCACCC 32072 Query 72184 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 72243 ||||| | ||| | ||||||||| || | || | | ||| || | ||||| || || Sbjct 32071 TGATCGACGTAGCGAGCGGTGTTGTTGAAGACGCGAAGCATAGGCACGATACCGTTAGAG 32012 Query 72244 GCACCATTGGTCCCGG 72259 |||| || || |||| Sbjct 32011 ACACCGTTAGTTCCGG 31996 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671136129538160