Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689995.1_202016-07-20] 366 sequences; 37,460,344 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq32 143 4e-29 seq198 125 1e-23 >seq32 Length=96279 Score = 143 bits (158), Expect = 4e-29 Identities = 313/463 (68%), Gaps = 8/463 (2%) Strand=Plus/Plus Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935 ||||| ||||| || || ||||| || | ||| ||||| | || || |||||| | ||| Sbjct 32070 CAGGGTGGCAACAAGCGTCCAGGTGCCTTCGCCATCTACATTGAGCCCTGGCACTCTGAC 32129 Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995 || || || || |||| | | || ||| ||| || |||| |||||| | || Sbjct 32130 GTCTTCGAGTTCCTCGACCTCAGGAAGAACCACGGCAAGGAGGAGGTCCGAGCCCGTGAG 32189 Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTC-AACG--ACGGTGGC 97052 | || || || || ||| | || || |||||||||||||| ||| ||| |||| | Sbjct 32190 CTCTTCTACGCCCTTTGGATCCCTGACTTGTTCATGAAGCGAGTCGAACAGAACGGAG-- 32247 Query 97053 TACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAG 97112 | ||| || |||||||||| || |||||||| | ||| || ||||| ||| Sbjct 32248 -AGTGGTCGCTGATGTGCCCCGCTGAGTGCCCCGGTCTCGCTGATGTCTACGGCGACGAG 32306 Query 97113 TTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATACGTGA-GACGAGTCGATGC 97171 || ||||| ||| | ||||||| ||||| || | | | || ||| | || Sbjct 32307 TTCGAGGCTCTCTACGAGAAGTACGAGCGTGAGGGTCG-TGCTCGCCGAACCGTCAAGGC 32365 Query 97172 ACGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCT 97231 | | | || ||| | ||| | | ||||||| |||||||| | || | ||| || Sbjct 32366 TCAAAAGCTTTGGTACGCCGTTCTCGAGGCTCAGACGGAGACTGGCAACCCTTTCATGCT 32425 Query 97232 CTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTC 97291 |||||||| | | || ||||| |||||| || | |||||||||||| |||| Sbjct 32426 TTACAAGGACGCTGCTAACCGCAAGTCGAACCAAAAGAACCTCGGCACCATCAAGTGCTC 32485 Query 97292 CAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAG 97334 || ||||||||||| || | |||||| | ||||||| ||| Sbjct 32486 TAACCTGTGCACGGAGATCATGGAGTACAGCGCTCCGGATGAG 32528 >seq198 Length=283761 Score = 125 bits (138), Expect = 1e-23 Identities = 221/318 (69%), Gaps = 8/318 (3%) Strand=Plus/Plus Query 125259 GAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCCG--- 125315 |||||| | ||||| || | ||||| || || |||| ||||||||||| || Sbjct 153931 GAGAACATTCACTCCGAGACATACTCCCTCCTCATCGACACATACATTCGCGACCCCGCA 153990 Query 125316 CAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCC-GTCTATACGTAAAAAGGC 125374 || || | || ||||| |||| || || || | || ||| | | |||| ||| Sbjct 153991 CAGCGCGAGTAC---CTCTTCGACGCCATGGAGACCATTCCCGTCGTCAAGCAAAA-GGC 154046 Query 125375 TCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGC 125434 | |||| | || |||||| | ||||| | || | | ||||| | ||||| || Sbjct 154047 CGAGTGGGCCCTGCGCTGGATCAACGACGAGGACTCCACTTTTGCCGAGCGCCTGGTTGC 154106 Query 125435 ATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAA 125494 || || |||||||||||||||||||| || || ||| || ||||||| |||||||| Sbjct 154107 CTTTGCTGCCGTAGAGGGCATCTTCTTCTCCGGCTCTTTCGCCTCCATCTTCTGGCTCAA 154166 Query 125495 GAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGG 125554 |||||| || ||||||||||| || || | |||||| | || ||||||||||| Sbjct 154167 GAAGCGTGGTCTCATGCCCGGTCTCACCTTCTCCAACGAGCTCATCAGCCGAGACGAGGG 154226 Query 125555 CCTACACTGTGACTTTGC 125572 || ||| |||||||| Sbjct 154227 TCTGCACACCGACTTTGC 154244 Score = 114 bits (126), Expect = 2e-20 Identities = 187/258 (72%), Gaps = 11/258 (4%) Strand=Plus/Plus Query 125013 CATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTC 125072 ||| | || ||| |||||||||| ||||| |||| || || ||||||| ||| ||| || Sbjct 153609 CATCAGATCTGGCAAATGTACAAGAAGGCAGAGGCATCGTTCTGGACGGCCGAGGAGATC 153668 Query 125073 GATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTT 125132 || || ||||||||| || |||| ||||| | |||| || | |||||| | || Sbjct 153669 GACCTTTCCAAGGACATGCACGACTGGGACAACAAGTTGAACGACAACGAGCGACACTTC 153728 Query 125133 ATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTT 125191 || ||| | | || ||||| || | || ||||| ||||||||||| || || || Sbjct 153729 ATCAGCCACGTCCTCGCATTCTTCGCTGCGTCAGATGGCATCGTCAACGAGAACCTCGTC 153788 Query 125192 GACACGATTC-TCTCAAGAGTTGACCATTC--CAGAGGTGTCG-TGCTTTTACGGATTCC 125247 || || ||| ||| |||| | ||| | |||||| ||| ||||| ||||| |||| Sbjct 153789 GA-GCGGTTCAGCTC-AGAG--GTCCAGGCAGCAGAGG-CTCGATGCTTCTACGGCTTCC 153843 Query 125248 AAATCATGAT-TGAGAAC 125264 |||||||||| |||| || Sbjct 153844 AAATCATGATGTGAGTAC 153861 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741055809654160