Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689995.1_202016-07-20] 366 sequences; 37,460,344 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq323 168 1e-37 >seq323 Length=177809 Score = 168 bits (186), Expect = 1e-37 Identities = 175/228 (77%), Gaps = 1/228 (0%) Strand=Plus/Plus Query 16447 CAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCG 16506 ||||| |||||| || ||||||||||| ||||| ||||| || ||||| ||||| ||||| Sbjct 26710 CAGAT-TCTTCGTGACAACATCCAAGGTATCACTAAGCCCGCAATCCGCCGTCTCGCTCG 26768 Query 16507 TCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAA 16566 ||||||||| ||||||||| |||| || | |||| || |||| ||| | ||| | || Sbjct 26769 TCGTGGTGGTGTCAAGCGTATCTCCGGTCTCATCTACGACGAGACTCGCGGTGTCCTCAA 26828 Query 16567 GATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAA 16626 | |||||||| || |||| || | ||| | || ||| ||||||||||| || || || Sbjct 26829 GCTCTTCCTCGAGTCCGTCATTCGTGACTCAGTCACCTACACCGAGCACGCCAAGCGCAA 26888 Query 16627 GACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCG 16674 ||||||||| || | || ||||||| || | || || || ||||| Sbjct 26889 GACTGTCACTTCTCTTGACGTCGTCTACGCTCTCAAGCGCCAGGGCCG 26936 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074865363638