Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689995.1_202016-07-20] 366 sequences; 37,460,344 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq296 98.7 1e-15 seq198 89.7 5e-13 >seq296 Length=257219 Score = 98.7 bits (108), Expect = 1e-15 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | ||||| || ||| | || || || | |||||| |||| |||| || | Sbjct 193393 ATGCAGATCTTTGTCAAGACACTCACAGGCAAGACCATCACCCTCGAGGTAGAGTCCTCC 193452 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| || || | ||||| ||||| ||||| || || || || || || ||| Sbjct 193453 GACACGATTGACAACGTCAAGACCAAGATCCAAGACAAGGAGGGCATCCCCCCAGACCAA 193512 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | ||||| | || |||||| || |||||||| | ||| | |||||| ||| Sbjct 193513 CAACGTCTCATCTTCGCCGGCAAGCAGCTCGAAGACGGCCGAACGCTATCCGACTACAAC 193572 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 || ||||||||||| || |||| || ||||| Sbjct 193573 ATCCAAAAAGAATCCACCCTCCACCTCGTCCT 193604 >seq198 Length=283761 Score = 89.7 bits (98), Expect = 5e-13 Identities = 137/193 (71%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 119667 aaaaaaTTAGTCTTGCCCTCAAGAGATATGTTATTCATAAACTCGAAAGGATTTGCAGTG 119726 || || || |||||||| | || || ||||| | ||| || ||||| ||||||| | | Sbjct 154511 AAGAAGTTTGTCTTGCCTTGCAGCGAAATGTTCTCCATGAAGTCGAAGGGATTTGTGGCG 154452 Query 119727 TTGAAATGCTTGTCGTAGCCCAACTCGAACAACAGTCGATCTGCCACAAACTCGATGTAT 119786 ||| | ||||| |||| || | | | || |||||| || || |||||||||||||| Sbjct 154451 TTGTAGTGCTTCTCGTTCCCGAGGGCTACCAGCAGTCGGTCAGCGACAAACTCGATGTAC 154392 Query 119787 TCGCACATGGATTGCGAATTCATGCCCAACATAGCGACCGGTAA-AGCATTGGTAAAGAA 119845 | || ||| | | | |||||||| | || | || || || ||||| ||| | ||| Sbjct 154391 TGGCTCATAAGTCGTGCGTTCATGCCGATCA-ATGAACAGGGAAGAGCATCGGTCAGGAA 154333 Query 119846 ATCCTTTTCAATG 119858 | ||| |||||| Sbjct 154332 AGCCTGCTCAATG 154320 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478660210119520