Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689995.1_202016-07-20] 366 sequences; 37,460,344 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq2 113 4e-20 seq312 98.7 9e-16 seq359 95.1 1e-14 seq296 91.5 1e-13 >seq2 Length=120822 Score = 113 bits (124), Expect = 4e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| | ||||| || |||||||| |||| ||||| || || Sbjct 12334 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACACTCGAGGTGGAATCATCA 12393 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||||||||| ||||| || ||| ||||| || || ||||| || ||||| Sbjct 12394 GACACTATCGACAACGTGAAGACGAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAG 12453 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || || |||||||| || || || || | |||||| | |||||||| Sbjct 12454 CAGCGCCTCATCTTCGCCGGCAAGCAGTTGGAGGACGGCCGCACTCTTTCTGATTACAAC 12513 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || || || ||||| || || || || Sbjct 12514 ATCCAGAAGGAGTCAACGCTTCACTTGGTTCT 12545 Score = 87.8 bits (96), Expect = 2e-12 Identities = 142/203 (70%), Gaps = 1/203 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| | ||||| || | ||||| | ||||| ||||| || Sbjct 12107 ATGCAGATCTTCGTCAAGACGCTCACCGGCAAGACAATCACTCTTGAAGTCGAGTCCTCA 12166 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| ||||| ||||| || ||| ||||| || || || || || |||||| Sbjct 12167 GACACGATCGACAACGTGAAGACGAAGATCCAAGACAAGGAGGGTATCCC-CCGGACCAA 12225 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || || |||||||| || || || || | ||||| | ||| ||||| Sbjct 12226 CAGCGCCTCATCTTCGCCGGCAAGCAGTTGGAGGACGGCCGCACCCTCTCCGACTACAAC 12285 Query 25179 ATTCAAAAAGAATCCACGCTACA 25201 || || || || ||||| || || Sbjct 12286 ATCCAGAAGGAGTCCACACTTCA 12308 >seq312 Length=215048 Score = 98.7 bits (108), Expect = 9e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| |||| ||||| | ||||| |||| |||||||| || Sbjct 143488 ATGCAGATCTTCGTCAAGACCCTGACGGGTAAGACTATCACCCTCGAGGTGGAGTCTTCC 143547 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||| | ||||| | | ||| |||||| ||||| ||||| || ||||| |||||| Sbjct 143548 GACTCCATCGACGCCGTCAAGACCAAAATCCAGGACAAGGAAGGTATCCCACCGGACCAA 143607 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || || |||||||| || | || || | || ||| | || ||||| Sbjct 143608 CAGCGACTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGTACTCTTTCGGACTACAAC 143667 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || || || || || || | ||||| Sbjct 143668 ATCCAGAAGGAGTCGACTCTCCACCTCGTGCT 143699 >seq359 Length=210429 Score = 95.1 bits (104), Expect = 1e-14 Identities = 141/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 25011 GTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAG 25070 || ||||| | ||||| || | ||||| |||| || |||||||| ||| | ||||| Sbjct 42317 GTCAAGACCCTCACCGGCAAGACGATCACCCTCGAGGTCGAGTCGTCCGACTCCATCGAC 42376 Query 25071 TCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATT 25130 | | ||| || ||| ||||| ||||| || || || ||||||||||| | || Sbjct 42377 GCCGTCAAGACCAAGATCCAGGACAAGGAAGGTATCCCCCCGGACCAACAGCGTCTCATC 42436 Query 25131 TTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAA 25190 || |||||||| || | || || | ||||||| | ||| ||||| || || || || Sbjct 42437 TTCGCCGGCAAGCAGCTCGAGGACGGTCGCACTCTCTCCGACTACAACATCCAGAAGGAG 42496 Query 25191 TCCACGCTACATTTAGTGCT 25210 ||||| || || || || || Sbjct 42497 TCCACTCTTCACTTGGTCCT 42516 >seq296 Length=257219 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| | || || || ||||||| |||| || ||||| || Sbjct 193393 ATGCAGATCTTTGTCAAGACACTCACAGGCAAGACCATCACCCTCGAGGTAGAGTCCTCC 193452 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || || | ||| || ||| ||||| || || || || || |||||| Sbjct 193453 GACACGATTGACAACGTCAAGACCAAGATCCAAGACAAGGAGGGCATCCCCCCAGACCAA 193512 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 || || | || || |||||||| || | ||||| | || || | ||| ||||| Sbjct 193513 CAACGTCTCATCTTCGCCGGCAAGCAGCTCGAAGACGGCCGAACGCTATCCGACTACAAC 193572 Query 25179 ATTCAAAAAGAATCCACGCTACA 25201 || |||||||||||||| || || Sbjct 193573 ATCCAAAAAGAATCCACCCTCCA 193595 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433326067086290