Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689995.1_202016-07-20] 366 sequences; 37,460,344 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq198 105 7e-18 >seq198 Length=283761 Score = 105 bits (116), Expect = 7e-18 Identities = 216/321 (67%), Gaps = 0/321 (0%) Strand=Plus/Minus Query 93089 AAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTT 93148 ||||| ||||||||||| || | ||| |||||||| || | ||| ||| ||| || Sbjct 154250 AAGCAAGCAAAGTCGGTGTGCAGACCCTCGTCTCGGCTGATGAGCTCGTTGGAGAAGGTG 154191 Query 93149 AAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaa 93208 | ||| || | || || || ||||||||||| || || || || ||| || || || Sbjct 154190 AGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAAGAGCCGGAGAAG 154131 Query 93209 aaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTG 93268 || || || || ||||| ||||| || || | || ||||||||| | | | | | Sbjct 154130 AAGATGCCCTCTACGGCAGCAAAGGCAACCAGGCGCTCGGCAAAAGTGGAGTCCTCGTCG 154071 Query 93269 CTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCG 93328 ||||||| | ||||| ||||| |||| ||| | || | || || || ||| Sbjct 154070 TTGATCCAGCGCAGGGCCCACTCGGCCTTTTGCTTGACGACGGGAATGGTCTCCATGGCG 154011 Query 93329 TTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATAC 93388 | || ||||| || |||| | | || || |||||||| ||||| | || || || Sbjct 154010 TCGAAGAGGTACTCGCGCTGTGCGGGGTCGCGAATGTATGTGTCGATGAGGAGGGAGTAT 153951 Query 93389 ATTTCAGAATGGACATTCTCC 93409 | || || || | |||||| Sbjct 153950 GTCTCGGAGTGAATGTTCTCC 153930 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556858252361840