Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689995.1_202016-07-20] 366 sequences; 37,460,344 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq2 141 8e-29 seq296 118 9e-22 seq327 93.3 4e-14 >seq2 Length=120822 Score = 141 bits (156), Expect = 8e-29 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| || || || | ||||| || || |||||||||| ||||| | | || Sbjct 7270 ATGCAGATTTTCGTCAAGACCCTCACCGGCAAGACCATCACTCTTGAGGTGGAGAGCTCC 7211 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || | || || || || ||||||||||| ||||| || || ||| Sbjct 7210 GACACGATCGACAATGTAAAGACCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAA 7151 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||| | || || |||||||| ||||| |||||| ||||||| | |||||||||||| Sbjct 7150 CAACGATTGATCTTCGCCGGCAAGCAGTTGGAGGATGGCCGCACCCTTTCCGATTACAAC 7091 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || || ||||| | || || || | || | ||||| ||| Sbjct 7090 ATCCAGAAGGAGTCCACTCTTCACTTGGTCCTCCGTCTCCGCGGTGGT 7043 Score = 141 bits (156), Expect = 8e-29 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| || || || | ||||| || || |||||||||| ||||| | | || Sbjct 7498 ATGCAGATTTTCGTCAAGACCCTCACCGGCAAGACCATCACTCTTGAGGTGGAGAGCTCC 7439 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || | || || || || ||||||||||| ||||| || || ||| Sbjct 7438 GACACGATCGACAATGTAAAGACCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAA 7379 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||| | || || |||||||| ||||| |||||| ||||||| | |||||||||||| Sbjct 7378 CAACGATTGATCTTCGCCGGCAAGCAGTTGGAGGATGGCCGCACCCTTTCCGATTACAAC 7319 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || || ||||| | || || || | || | ||||| ||| Sbjct 7318 ATCCAGAAGGAGTCCACTCTTCACTTGGTCCTCCGTCTCCGCGGTGGT 7271 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | ||||| || || ||||||| ||||| || | | | Sbjct 7726 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACTATCACTCTCGAAGTCGAGAGCTCA 7667 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || | || || || || ||||||||||| ||||| || |||||| Sbjct 7666 GACACGATCGACAATGTAAAGACCAAGATCCAGGACAAGGAGGGCATTCCTCCGGATCAA 7607 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || | || || |||||||| ||||| |||||| ||||||| | |||||||||||| Sbjct 7606 CAGCGATTGATCTTCGCCGGCAAGCAGTTGGAGGATGGCCGCACCCTTTCCGATTACAAC 7547 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || || ||||| | || || || | || | ||||| ||| Sbjct 7546 ATCCAGAAGGAGTCCACTCTTCACTTGGTCCTCCGTCTCCGCGGTGGT 7499 Score = 123 bits (136), Expect = 2e-23 Identities = 165/228 (72%), Gaps = 1/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | ||||| || || ||||||||||||| || || | Sbjct 12107 ATGCAGATCTTCGTCAAGACGCTCACCGGCAAGACAATCACTCTTGAAGTCGAGTCCTCA 12166 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | | || || || |||||||||||||||| ||| || || ||| Sbjct 12167 GACACGATCGACAACGTGAAGACGAAGATCCAAGACAAGGAGGGTA-TCCCCCGGACCAA 12225 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || |||||||| ||||| ||||| ||||||| ||||||| |||||| Sbjct 12226 CAGCGCCTCATCTTCGCCGGCAAGCAGTTGGAGGACGGCCGCACCCTCTCCGACTACAAC 12285 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || || ||||| | || | ||| | || | ||||| ||| Sbjct 12286 ATCCAGAAGGAGTCCACACTTCACCTTGTTCTCCGTCTCCGCGGTGGT 12333 Score = 114 bits (126), Expect = 1e-20 Identities = 155/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 22231 GTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGAC 22290 ||||| ||| | || || || || |||| ||||| || || | | || ||| | ||| Sbjct 11662 GTTAAGACTCTGACTGGCAAGACCATCACCCTTGAGGTTGAGTCTTCAGACACCATTGAC 11721 Query 22291 GATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATA 22350 || |||| || || |||||||||||||| ||||| || || || || || || || Sbjct 11722 AATGTCAAGACCAAGATCCAAGACAAGGAGGGCATTCCTCCGGACCAGCAGCGCCTCATC 11781 Query 22351 TTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAA 22410 || |||||||| || | ||||| ||||||| | |||||||||||||| ||||| || Sbjct 11782 TTCGCCGGCAAGCAACTCGAGGACGGCCGCACCCTTTCCGATTACAACATCCAAAAGGAG 11841 Query 22411 TCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| | || || || | || |||| || ||| Sbjct 11842 TCCACACTGCACTTGGTCCTCCGCCTGCGTGGTGGT 11877 Score = 113 bits (124), Expect = 4e-20 Identities = 151/209 (72%), Gaps = 1/209 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| || || || | ||||| || || |||| || || |||||| | | Sbjct 7042 ATGCAGATTTTCGTCAAGACCCTCACCGGCAAGACCATCACACTCGAGGTGGAATCATCA 6983 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| || |||| || ||||| ||||||||||| || || || || || Sbjct 6982 GACACCATTGACAATGTCAAGACGAAGATTCAGGACAAGGAGGGCATCCC-CCGGACCAG 6924 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||| | || || || ||||| ||| | || || ||||||| | || || |||||| Sbjct 6923 CAACGATTGATCTTCGCGGGCAAGCAGCTCGAAGACGGCCGCACCCTTTCGGACTACAAC 6864 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGT 22427 |||||||| || ||||| | ||||| || Sbjct 6863 ATTCAAAAGGAGTCCACTCTTCATTTGGT 6835 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | ||||| || || |||| |||||||| || | | Sbjct 12562 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACAATCACCCTTGAAGTCGAGTCTTCA 12621 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| || | || || ||||| ||||||||||| ||||| || || ||| Sbjct 12622 GACACCATCGACAATGTGAAGACCAAGATTCAGGACAAGGAGGGCATTCCTCCGGACCAA 12681 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||| | || || |||||||| ||| | || || || || |||| || |||||| Sbjct 12682 CAACGATTGATCTTCGCCGGCAAGCAGCTCGAAGACGGACGTACTCTCTCTGACTACAAC 12741 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || ||||| || ||||| | ||||| || | || | ||||| || Sbjct 12742 ATCCAAAAGGAGTCCACACTTCATTTGGTCCTCCGTCTCCGCGGTGG 12788 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | ||||| || || |||| || || |||||| | | Sbjct 12334 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACACTCGAGGTGGAATCATCA 12393 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | | || || || || ||||||||||| ||||| || || || Sbjct 12394 GACACTATCGACAACGTGAAGACGAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAG 12453 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || |||||||| ||||| ||||| |||||| | || ||||||||| Sbjct 12454 CAGCGCCTCATCTTCGCCGGCAAGCAGTTGGAGGACGGCCGCACTCTTTCTGATTACAAC 12513 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || || || || | || || ||| | || ||||||| ||| Sbjct 12514 ATCCAGAAGGAGTCAACGCTTCACTTGGTTCTTCGTCTGCGCGGTGGT 12561 Score = 104 bits (114), Expect = 2e-17 Identities = 161/229 (70%), Gaps = 1/229 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | ||||| || || |||| || ||||| ||| | | Sbjct 11878 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACACTCGAAGTTGAATCATCA 11937 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || |||| || || |||||||||||||| || || || || || Sbjct 11938 GACACGATCGACAATGTCAAGACCAAGATCCAAGACAAGGAGGGCATCCCTCCGGACCAG 11997 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCA-CCGTCTCCGATTACAA 22397 || || ||||| || ||||| || ||| | ||||| ||| | || ||||||| ||||| Sbjct 11998 CAGCGCCTTATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGAACCCTTCTCCGACTACAA 12057 Query 22398 CATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||| || || || ||||| | || || ||| | || | || || ||| Sbjct 12058 CATCCAGAAGGAGTCCACATTGCACTTGGTTCTCCGCCTTCGTGGTGGT 12106 >seq296 Length=257219 Score = 118 bits (130), Expect = 9e-22 Identities = 145/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || | || || || || |||| || || || || || || Sbjct 193393 ATGCAGATCTTTGTCAAGACACTCACAGGCAAGACCATCACCCTCGAGGTAGAGTCCTCC 193452 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | |||| || || |||||||||||||| || || || || ||| Sbjct 193453 GACACGATTGACAACGTCAAGACCAAGATCCAAGACAAGGAGGGCATCCCCCCAGACCAA 193512 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 |||||||| || || |||||||| ||| | || || ||| || | ||||| |||||| Sbjct 193513 CAACGTCTCATCTTCGCCGGCAAGCAGCTCGAAGACGGCCGAACGCTATCCGACTACAAC 193572 Query 22399 ATTCAAAAAGAATCCACC 22416 || ||||||||||||||| Sbjct 193573 ATCCAAAAAGAATCCACC 193590 >seq327 Length=173597 Score = 93.3 bits (102), Expect = 4e-14 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | ||||| || | ||||||||||||| || | | Sbjct 94345 ATGCAGATCTTCGTCAAGACACTCACCGGCAAGGCCATCACTCTTGAAGTCGATTCATCA 94404 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | ||| | | | || || || |||||||| || | || || || ||| Sbjct 94405 GATACGATCGACAACGGCCAGACCAAGATCCAGGACAAGGAAGGCACCCCTCCGGACCAA 94464 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || ||||| || |||||||| || | ||||| ||||||| ||||||| |||||| Sbjct 94465 CAGCGCCTTATCTTCGCCGGCAAGCAACTCGAGGACGGCCGCACCCTCTCCGACTACAAC 94524 Query 22399 ATTCAAAAAGAATC 22412 || || ||||| || Sbjct 94525 ATCCAGAAAGAGTC 94538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419726127750790