Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689995.1_202016-07-20] 366 sequences; 37,460,344 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq13 109 1e-18 seq198 104 5e-17 seq32 98.7 2e-15 >seq13 Length=111903 Score = 109 bits (120), Expect = 1e-18 Identities = 670/1047 (64%), Gaps = 71/1047 (7%) Strand=Plus/Minus Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404 |||||||| |||| ||||| | ||||| ||||| || |||| |||||||| || ||| Sbjct 64139 GGTGAGGACTTGTGCAACTGTCAGTTCTCTCTCGCCTACGGTGCCAAGATTCTTCTCAAC 64080 Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464 | || ||| | |||||||||| |||| || |||||| || | || || | Sbjct 64079 ACCGCCACTCTCCGCCTCAAGCGTGGTCACCGTTACGGTCTCTGTGGCCGTAACGGTTCC 64020 Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524 || ||| || || |||||||||||| ||||||||| | || || || ||| | Sbjct 64019 GGCAAGTCTACCCTCATGCGCGCCATTCAGAACGGTCAGGTCGAGGGTTTCCCTTCGCCC 63960 Query 279525 TCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTCCTCTCTCTCGGATAGCACT 279584 ||||| | ||| ||| || |||||||| |||| | | || ||| || | Sbjct 63959 GACGAGGTTCGCACATGGTACGTCGAGCACGATCTCGA-TGGT-TCCGAGGGAGAGATGT 63902 Query 279585 G--TGTTCGACTTCCTAACGTCTGACAATCAGGTTATGGAAATCAGCTCTCCTGAGGAAA 279642 | || |||| | | | | | ||| | | | | | ||||| ||||| Sbjct 63901 CCATTTTGGACTACATCATGACCGACGACCGCCTCAGCGT------CTCTCGGGAGGAGG 63848 Query 279643 TCATCCAGAAACTGGAGGCCAATGGTTTTGATGAAA---GAATGCGTAATCTGCCAGTAG 279699 | || | || | || | || || || ||| || | | |||| ||| | | Sbjct 63847 CCGTCAGCACTCTTGCGGAGATGGGCTTCGACGAAGTTCGACAGGG--ATCTCCCA-TCG 63791 Query 279700 GTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGTG 279759 || || || ||||| |||||||||||||| || ||| | || ||| | || | | Sbjct 63790 CCTCCCTCTCTGGTGGCTGGAAGATGAAGCTCGCTCTCGCCCGTGCCGTGCTCTTCAAGG 63731 Query 279760 CCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGGC 279819 |||| | || || || |||||||| ||||||||| ||||| | |||| | || ||| Sbjct 63730 CCGACATTCTCCTCCTCGATGAGCCCACCAACCACTTGGACGTCGTCAACATCGCTTGGA 63671 Query 279820 TAGTGTCCTACCTAACCA--GTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCACGACTC 279877 | |||||| |||| |||| || ||| | || ||||||| || |||||||| Sbjct 63670 TCACCAACTACCTCACCAACGTCTCAA--ATGCCACCGCCATCATTGTGTCGCACGACTC 63613 Query 279878 TGGCTTCCTAGATGCCGTGTGCTCTGCCATCATTCACTATGAGCAAAATCTGAAGCTCTC 279937 | ||||| || ||| ||| | | ||| | |||| ||| | || ||| || Sbjct 63612 TCAATTCCTCGACAACGTCTGCACGGACATTCTCCACT-TGAACCGCTTC--AAGATC-- 63558 Query 279938 CAAGCAC-ATC--GGCAACCTGTCTGCTTTCGTGGCAAAGCGCCCTGAGGC---GGC--- 279988 |||| ||| || ||| ||||||| ||||| || ||||||||| ||| Sbjct 63557 -AAGCGTTATCCCGGTAACTTGTCTGCCTTCGTCGCTCGTGTCCCTGAGGCCAAGGCTTA 63499 Query 279989 CGCCTA-CT-ATGACCTGA-AGGACGCCACCGCCAAGTGGGAATTCCCTGAGCCAGGGTT 280045 |||| | || | ||| | ||||| || | |||| ||||| || || | Sbjct 63498 CGCCGAGCTCAACACCGGCGAGGACTACAGCTTCAAGC-----TTCCC-GACCCGCCACT 63445 Query 280046 TCTGGAGGGCATCA-----CATCAAAGGATCGCGCAATCATGAAGCTCCGTGGCGTCTCC 280100 ||| || || ||| | | | | | |||| || | ||| | |||| ||||| Sbjct 63444 TCTCGATGGTGTCAAGACGCGTGAGAAG-TCGC----TCGTTAAGATGCGTGACGTCTGG 63390 Query 280101 TTTGCTTATCCCAATGGCCCCAACATCTTCAGC---AGTGTCAACTC---GCAGGTTTCT 280154 || || ||| | |||| || | ||| | || || | ||| |||| | ||| Sbjct 63389 TTCCAATACCCCGGTACCCCCGAC--CCTCAACTCAAGGGT-ATCTCCATGCAGCTGTCT 63333 Query 280155 ATGAACTCACGGATTGGTGTCATT---GGACCCAATGGTGCGGGTAAGTCTACCCTAATC 280211 || || || || || |||| || ||||| ||| | || ||||| || || || Sbjct 63332 TTGTCGTCGCG---TGTTGCCATTCTCGGTCCCAACGGTTCCGGCAAGTCGACGCTCGTC 63276 Query 280212 AAAGTCCTGACTGGCGAGACCCAGGCCACTGAGGGGTCCGTT-TGGAAGCATCCCAACAT 280270 || || || ||| || || |||||| ||| ||| | | |||||||| |||||| | Sbjct 63275 AAGCTCATGGTTGGTGACACAGAGGCCAA-GAGTGGTGAGGTGTGGAAGCACCCCAACTT 63217 Query 280271 GCGGATGGCTTACGTCGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGAC 280330 | || | |||||||| || |||||||||||||||||||| | ||| |||||| ||| Sbjct 63216 GGTTATCGGATACGTCGCCCAACACGCTTTCCACCACATCGACCAGCACTTGGACAAGAC 63157 Query 280331 TCCTAACCAATACATTCAGTGGCGCTA 280357 ||| | | ||||| |||||| || Sbjct 63156 CCCTCTCGACTACATGTTGTGGCGATA 63130 Score = 86.0 bits (94), Expect = 1e-11 Identities = 115/159 (72%), Gaps = 2/159 (1%) Strand=Plus/Minus Query 280680 GGTCTGGACCCCGAGTTTACAACTCACTCTCGCATTCGCGGTCTTTCTGGAGGCCAGAAG 280739 ||||| || | ||||| ||| | ||| ||| || ||||| ||||| ||||||||| Sbjct 62725 GGTCTCGAGCGTGAGTTCACATCGCACAACACCATGCGTGGTCTCTCTGGTGGCCAGAAG 62666 Query 280740 GTCAAACTTGTCATCGGAGCAGCTCTGTGGCAACACCCTCACGTGATCGTTCTCGACGAG 280799 ||||| |||| |||| || || |||| | || ||| | |||| ||||||||| Sbjct 62665 GTCAAGATTGTGCTCGGTGCCGCAACATGGCGTAAGCCCCACATTGTCGTCCTCGACGAG 62606 Query 280800 CCTACCAACTATCTGGACCGCGAGAGCCTG--GGCGCTC 280836 || ||||||| ||||||| ||| |||| ||||||| Sbjct 62605 CCCACCAACTTCTTGGACCGTGAGTCCCTGGCGGCGCTC 62567 >seq198 Length=283761 Score = 104 bits (114), Expect = 5e-17 Identities = 284/430 (66%), Gaps = 10/430 (2%) Strand=Plus/Minus Query 251566 AAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTGGCA 251625 ||||| || | |||||| | ||| || || |||||||||||||||||| |||||||| Sbjct 154511 AAGAAGTTTGTCTTGCCTTGCAGCGAAATGTTCTCCATGAAGTCGAAGGGATTTGTGGCG 154452 Query 251626 TTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGATAC 251685 ||||| ||||| | || || ||||| | | ||||| || |||||||| | ||| Sbjct 154451 TTGTAGTGCTTCTCGTTCCCGAGGGCTACCAGCAGTCGGTCAGCGACAAACTCGATGTAC 154392 Query 251686 TGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATGAAT 251745 || | ||| ||| | ||||||||| |||| ||| |||| || || | ||| Sbjct 154391 TGGCTCATAAGTCGTGCGTTCATGCCGATCAATGAACAGGGAAGAGCATCGGTCAGGAAA 154332 Query 251746 TCCTTTTCGTTGGCAACTGCCTCCTCCACAAT-TGC----CTTCACCTGTGCCAGAGACA 251800 ||| || ||| || | ||| | | || || | || | | | | | | Sbjct 154331 GCCTGCTCAATGGTGACAGACTCGGCAATGATGCGCAGAACGACATCGGGG--TGCGGCC 154274 Query 251801 GCTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCGTCGC 251860 |||| || | | || || ||| | |||| | ||||||||||||||| | Sbjct 154273 GCTTCTTGAGGTGGCTGAAGAGCA--AGCAAG-CAAAGTCGGTGTGCAGACCCTCGTCTC 154217 Query 251861 GACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCCAGA 251920 | ||||||| ||||||||| | || || ||||| | ||||| ||| ||||||||| Sbjct 154216 GGCTGATGAGCTCGTTGGAGAAGGTGAGACCGGGCATGAGACCACGCTTCTTGAGCCAGA 154157 Query 251921 AGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCATGCAACAAGGC 251980 |||| | | || || || ||||| | | ||||| || | | ||||| |||| Sbjct 154156 AGATGGAGGCGAAAGAGCCGGAGAAGAAGATGCCCTCTACGGCAGCAAAGGCAACCAGGC 154097 Query 251981 GCTCAGCAAA 251990 |||| ||||| Sbjct 154096 GCTCGGCAAA 154087 >seq32 Length=96279 Score = 98.7 bits (108), Expect = 2e-15 Identities = 175/247 (71%), Gaps = 14/247 (6%) Strand=Plus/Minus Query 293127 GACAAAGGCACCACGATCAGCAGCGAGGTCAATCACTGTCTTCATAGAGATCTCCCACGA 293186 || ||||||||| || || ||||| | ||| || | |||| |||||||||||| Sbjct 33329 GATAAAGGCACCTCGGTCGGCAGCCATGTCGATGATGACCTTCTGCGAGATCTCCCACAC 33270 Query 293187 TGTCTTGTACACTGCCTTGACATCAGG--ATGAATGCCAATAACCTTCTGGATAGACCCT 293244 ||||||||||| ||||||| || || ||||||| || |||||||| || || Sbjct 33269 TGTCTTGTACAGTGCCTTG--ATGCGGTCGGGAATGCCGGGCACGTTCTGGATCGAGCCG 33212 Query 293245 CCGTTGGCAATAATCTGGTTCTTCAT-TGTCTCGGACCA-AGTCC---CACGAGCAATGA 293299 |||| ||| || || |||||||||| ||| ||| ||| || || | ||| || | Sbjct 33211 CCGTGGGCTATGATGCGGTTCTTCATCTGT-TCGTTCCACAGACCTTGCTCGA-CA---A 33157 Query 293300 GCTCGCGGACAAGGTAAGAGTTGACAACGGGGAACTCACCAGCGAGAGTGCGACGGCTGT 293359 |||| || | || ||| |||||| || ||||||| || ||||| || ||| ||| Sbjct 33156 GCTCACGCAGCAGCCAAGGGTTGACGACTTGGAACTCGCCGGCGAGCACACGTCGGGTGT 33097 Query 293360 AAATGTT 293366 ||| ||| Sbjct 33096 AAAGGTT 33090 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027831980087806