Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689995.1_202016-07-20] 366 sequences; 37,460,344 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq32 468 1e-126 seq198 255 1e-62 >seq32 Length=96279 Score = 468 bits (518), Expect = 1e-126 Identities = 1150/1722 (67%), Gaps = 64/1722 (4%) Strand=Plus/Minus Query 243902 AAGGGCGCC-CGCTCTGCGGCCATGGTGATGAGGTCCTTCTGAGATATCTCATACGCCGT 243960 || ||| || || || || |||||| ||||| | ||||||| || ||||| || | || Sbjct 33326 AAAGGCACCTCGGTCGGCAGCCATGTCGATGATGACCTTCTGCGAGATCTCCCACACTGT 33267 Query 243961 CTTGTAGATGGGCTTGAGGTGCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTG 244020 |||||| | | ||||| | | ||||| | || | |||||| | |||||| ||| Sbjct 33266 CTTGTACAGTGCCTTGATGCGGTCGGGAATGCCGGGCACGTTCTGGATCGAGCCGCCGTG 33207 Query 244021 GACGATGAGCTGGGTGCGCATGTTATCGTTCCACAGGCCCAAGCGCTCCAGCGCCTCGAC 244080 | | |||| || | ||| | ||||||||||| || |||| | ||| Sbjct 33206 GGCTATGATGCGGTTCTTCATCTGTTCGTTCCACAGACCTT---GCTCGACAAGCTCACG 33150 Query 244081 CAGGTGCCT---GTTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTT 244137 ||| ||| ||| || || || ||||| || | ||||| || || ||| ||||| Sbjct 33149 CAGCAGCCAAGGGTTGACGACTTGGAACTCGCCGGCGAGCACACGTCGGGTGTAAAGGTT 33090 Query 244138 GCTGCTGAGCGGCTCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGG 244197 ||| || ||||| | || ||| || ||| || ||||| || ||||| || Sbjct 33089 GCTCGTGTAAGGCTCAAAGCACTCGTTGAAGCCGAGGATCTGACTTGTCGAAGCAGTGGG 33030 Query 244198 CATGGGCGACACCAGCAGACTGTTCCTCACGCCGTGCCTCTGG--ATGCGGAGTCTGAGC 244255 ||| || | | ||| ||| ||| | | ||||| | || ||| | | ||| Sbjct 33029 CATAGGGGCGAGCAGGAGAGAGTTTCGGAGACCGTG--TGCGGCAATGTTGCGCTTGATT 32972 Query 244256 TCGTTCCAGTCCCACATGCCCGAGAGGTCCTC-GCGTTTGAGGCCCCACATGTCAAACTG 244314 ||| ||||||||| | |||| | | | ||| ||||| | || | || Sbjct 32971 TCGGCCCAGTCCCAGA----------GTCCACTGGGAGTGACTCCCCAGAGATCGTATTG 32922 Query 244315 CAGCAGCCCCTTGCTGACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGC 244374 |||| ||||||||| |||||||||||||| ||| ||||| ||| || ||| Sbjct 32921 CAGCTCGCCCTTGCTGGTTGGGCTGCCCTCGTATGTCTCGTAGGTCCCGAGCTCCTTGGC 32862 Query 244375 CAGCTTACAGCTCTCG-TCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCA 244433 |||| || | ||| ||||| ||||||| |||||| |||||||||||| |||| | Sbjct 32861 GAGCTCGCA-CGATCGCTCGAGAGCGGCGTGGTAGATCGTCTCGAAGATCTGGATGTTGA 32803 Query 244434 TGTCGCGGGCCTTGCCGCAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTC 244493 | ||||| | || | ||||| | ||||| |||||||| ||||||| || | Sbjct 32802 GCTTCTTGGCCTCGGGGCTGTCGAAGGCGTAACCCATGATCATGAAAGCGTCGGCGAGAC 32743 Query 244494 CCTGCACGCCGATGCCGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGG 244553 | | || ||||| |||||||| | ||| ||| ||||||| | | || ||||| || | Sbjct 32742 CGTTGACTCCGATACCGATGGGGCGGTGGCGCATGTTGGACTTCTTCGCCTCGGGAACAG 32683 Query 244554 GGTAAAAGTTGCCGTCGATCACCTTGTTGAGGTTGCGGGT---GATCATGCGGACGACGT 244610 |||| ||||| | ||||| | |||||||||||||| || | || || ||| Sbjct 32682 GGTAGTAGTTGACATCGATGATCTTGTTGAGGTTGCCACAAACGACCTTGGTAACCTCGT 32623 Query 244611 CGGCCAGCAGCTGAAAGTCGTAC-TCGTAGGGATCCTCGGCGATGGTGATCCTCACAAAC 244669 | ||| || |||||||| || | | | || | |||| | ||| || | Sbjct 32622 GG---AGCTTCTTGAAGTCGTATGTCCTTGTGTTCGTGTGCGA-GTCGATGTGGACGTAA 32567 Query 244670 TCGTTGAGGGCGACGCTGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGG 244729 || || | ||||| ||||||||||| || ||||| |||| | |||||| Sbjct 32566 GAAGGCAGAGCCATACTGGCAAGGTTGCAGACAGCGACCTCATCCGGAGCGCTGTACTCC 32507 Query 244730 ACAATCTCGGTGCAGAGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTG 244789 | ||||| ||||| |||||| ||||||||||||||| |||| || || || |||||| Sbjct 32506 ATGATCTCCGTGCACAGGTTAGAGCACTTGATGGTGCCGAGGTTCTTTTGGTTCGACTTG 32447 Query 244790 GCGTT-GCAGGCGTCCTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAG 244848 ||| |||| |||||||||| |||||||| || || ||||| ||| || |||| Sbjct 32446 CGGTTAGCAG-CGTCCTTGTAAAGCATGAAAGGGTTGCCAGTCTCCGTCTGAGCCTCGAG 32388 Query 244849 GACGCTGTTCCAGAGGTCCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTA 244908 ||| || ||| || | ||||||||| || | |||||| ||||| |||||| Sbjct 32387 AACGGCGTACCAAAGCTTTTGAGCCTTGACGGTTCGGCGAGCACGACCCTCACGCTCGTA 32328 Query 244909 GCGGGTGTACAGGGCCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGC 244968 ||| || |||||||||||| ||| |||| || | || ||||||||| || Sbjct 32327 CTTCTCGTAGAGAGCCTCGAACTCGTCGCCGTAGACATCAGCGAGACCGGGGCACTCAGC 32268 Query 244969 CGGGCACATGAGACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGAT 245028 |||||||| || |||||| ||| | | ||| | || |||||| | ||| ||||| Sbjct 32267 GGGGCACATCAGCGACCACTCTCCGTTCTGTTCGACTCGCTTCATGAACAAGTCAGGGAT 32208 Query 245029 CCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTG--CTCGTCCGAGCCAGTGTTCTTCCTC 245086 ||| ||||| | |||||| || | || ||| | ||| ||| ||| ||||||||| Sbjct 32207 CCAAAGGGCGTAGAAGAGCTCACGGG--CTCGGACCTCCTCCTTGCCGTGGTTCTTCCTG 32150 Query 245087 AGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCG 245146 || || | || || |||||||| |||||||||||| ||||||| |||| ||| || Sbjct 32149 AGGTCGAGGAACTCGAAGACGTCAGAGTGCCAGGGCTCAATGTAGATGGCGAAGGCACCT 32090 Query 245147 GGCCGCTTGTTGCCTCCCTGGTCCACCATCCTCTCGAGCG----CGTTGAAGATGCGCAG 245202 || ||||||||||| ||||| || | | | |||||| |||||||| ||| || Sbjct 32089 GGACGCTTGTTGCCACCCTGATCGA----CGTAGCGAGCGGTGTTGTTGAAGACGCGAAG 32034 Query 245203 GGTAGGCACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCT 245262 ||||||| || ||||||||| ||||| || || ||||| | ||| | || | Sbjct 32033 CATAGGCACGATACCGTTAGAGACACCGTTAGTTCCGGCAATGTATGAGCCGGTACCACG 31974 Query 245263 GAGGTTGCTGATGGACATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTT 245322 || | | |||| | ||| | || || || |||| ||| | ||||||| |||| Sbjct 31973 GATGCAGTGGATGTTGAGGCCGATGCCACCAGCCGTCTTGCTGATCATGGCGCAGGTCTT 31914 Query 245323 GATGGTGTCTGCTATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGA 245382 || ||||| ||||| || || ||| ||||||| ||| ||| ||||| || || Sbjct 31913 GAGAGTGTCGTAGATGCCGTCGATCGAGTCGTCCTTCATGGTGACCAGGAAGCACGATGA 31854 Query 245383 CAGCTGGGGCTTGGGGCTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTAGCG 245442 || || || ||||| | | | |||||| || |||||| ||| ||||| ||||| | Sbjct 31853 CATTTGAGGGTTGGGTGTACCAGCGTTGAAGAGGGTGGGGGAGGCATGGGTGAAGTA-CT 31795 Query 245443 GCT-CGAGAGGAACCCGTACGTCTGGAGCAGAGCGTCGATGTTGTCGCCGTGGATCTGCA 245501 || ||| | || ||| || | || |||||||| ||||||| ||| Sbjct 31794 TCTCCGACATGAGGTTGTAAGTGTCGATGGCCTCGTCGATGGAACTCCCGTGGA--TGCC 31737 Query 245502 GGGCGCACCT--CATGAGGGTGTGCTGGGGCGTCTCGATGGGTCCCTCGGGTCCCTTG-- 245557 | ||| || |||||| |||| ||||| |||| | | || | || ||| Sbjct 31736 GACAGCAACTCGCATGAGCATGTGTTGGGGGCGCTCG--GCGACCTT----GCCGTTGAT 31683 Query 245558 ----AGCATGTAGGAGCGCTCGAGCGTCTTGAACCCAAAGTA 245595 |||| |||||||||||||| |||||||| || ||||| Sbjct 31682 GCGCAGCAGATAGGAGCGCTCGAGGGTCTTGAAGCCGAAGTA 31641 >seq198 Length=283761 Score = 255 bits (282), Expect = 1e-62 Identities = 419/592 (71%), Gaps = 19/592 (3%) Strand=Plus/Plus Query 42537 GAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTC 42596 |||||| | ||||| ||| ||| || || || |||| ||||| | || |||| Sbjct 153931 GAGAACATTCACTCCGAGACATACTCCCTCCTCATCGACACATACATTCGCGACCCCGCA 153990 Query 42597 GAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGAC 42656 |||| | || ||| | ||||||||||| || ||| | ||||| | ||||| || Sbjct 153991 CAGCGCGAGTACCTCTTCGACGCCATGGAGACCATTCCCGTCGTCAAGCAAAAGGCCGAG 154050 Query 42657 TGGGCGCTCAACTGGATCGA----GAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGC 42712 ||||| || ||||||| | ||| ||| | || || | |||| | ||||| || Sbjct 154051 TGGGCCCTGCGCTGGATCAACGACGAG----GACTCCACTTTTGCCGAGCGCCTGGTTGC 154106 Query 42713 CTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAA 42772 |||| | ||||| ||||||||||||||||| ||| | ||||||||||||||||||||||| Sbjct 154107 CTTTGCTGCCGTAGAGGGCATCTTCTTCTCCGGCTCTTTCGCCTCCATCTTCTGGCTCAA 154166 Query 42773 GCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGG 42831 | || ||| || |||||||| ||||||||||| ||||| ||||||||| | ||||||| Sbjct 154167 GAAGCGTGGTCTC-ATGCCCGGTCTCACCTTCTCCAACGAGCTCATCAGCCGAGACGAGG 154225 Query 42832 GGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCC-CTCG 42890 | ||||| | |||||||| ||| | || ||| |||||||||| | | ||| | | Sbjct 154226 GTCTGCACACCGACTTTGCTTGCTTGCTCTTC---AGCCACCTCAAGAAGCGGCCGCACC 154282 Query 42891 AAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACG 42950 | | | || | | |||||| | ||| | || || ||| ||| ||||| || Sbjct 154283 CCGATGTCGTTCTGCG-CATCATTGCCGAGTCTGTCACCATTGAGCAGGCTTTCCTGACC 154341 Query 42951 CAGTCGCTGCCCGTGTCCCTGGTCGGCATGAAC-CACGACCTCATGTGCAAGTACATCCA 43009 | | || ||| || || ||||||||||| ||||| || ||| || |||||||| | Sbjct 154342 GATGCTCTTCCCTGTTCATTGATCGGCATGAACGCACGA-CTTATGAGCCAGTACATCGA 154400 Query 43010 GTACGTCGCCGACCATCTCCT-GTGCCAGATGGGTCTCAGCCGCCTCTACAACACGCCGT 43068 || ||||| |||| || || || | ||| || | | ||||||| | | Sbjct 154401 GTTTGTCGCTGACCGACTGCTGGTAGCCCTCGGGAACGAGAAG-CACTACAACGCCACAA 154459 Query 43069 GCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTT 43120 ||||||||||| ||||||||||| ||| || | |||||||| ||||| || Sbjct 154460 ATCCCTTCGACTTCATGGAGAACATTTCGCTGCAAGGCAAGACAAACTTCTT 154511 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944334879648160