Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689995.1_202016-07-20] 366 sequences; 37,460,344 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq13 102 2e-16 seq221 91.5 3e-13 seq198 84.2 5e-11 >seq13 Length=111903 Score = 102 bits (112), Expect = 2e-16 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 334128 TCGGACCCGTCGAGATCGTGTTCCACGTAAGCAGTTTTCAAA--ACATCCGCAGAGGGGA 334185 ||||| || ||||||||||| || ||||| | | | | || | || | || |||| Sbjct 63913 TCGGAACCATCGAGATCGTGCTCGACGTA--CCATGTGCGAACCTCGTCGGGCGAAGGGA 63970 Query 334186 ACCCTTCAAGCTGACCGTTCACAATAGCGCGCATCAGAGTTGATTTACCCGCCCCGTTTG 334245 | || || | |||||||||| ||| |||||||| || || || || || | ||||| Sbjct 63971 AACCCTCGACCTGACCGTTCTGAATGGCGCGCATGAGGGTAGACTTGCCGGAACCGTTAC 64030 Query 334246 GCCCACACAGACCGTAGCGGTTTCCACGCTTCAGATTGAACCGCGTATTGTTCAGAAGAA 334305 | ||||| |||||||| |||| |||||||| || || | |||| ||||||| Sbjct 64031 GGCCACAGAGACCGTAACGGTGACCACGCTTGAGGCGGAGAGTGGCGGTGTTGAGAAGAA 64090 Query 334306 TTTTTCCACCATATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 334354 | || |||| || || ||||| || | ||| | |||| |||||||| Sbjct 64091 TCTTGGCACCGTAGGCGAGAGAGAACTGACAGTTGCACAAGTCCTCACC 64139 >seq221 Length=756399 Score = 91.5 bits (100), Expect = 3e-13 Identities = 138/191 (72%), Gaps = 4/191 (2%) Strand=Plus/Minus Query 298261 TTGAAGGCCGAGAATTTGTTTGA-GCGCTGTGATTTCTTCGTTCTTCGTGATGCTTGCCA 298319 |||||| |||||||| | ||||| | || |||| || | |||||| ||||| | Sbjct 522110 TTGAAGCCCGAGAATCTCTTTGATGTTCT-TGATCTCCGCATTCTTCATGATGGCGTCGT 522052 Query 298320 CGGATGCATCGCGGACATTCAATAGTTTTCCACGAAGAGGGAACACTCCATATCTCTCGC 298379 ||| || |||||||| || | || |||||||| | ||||||||||| | | || | Sbjct 522051 GGGAAGCTTCGCGGACGTTGAGCAGCTTTCCACGTAACGGGAACACTCCCCAGTTGTCAC 521992 Query 298380 GACCGACCACGGACAGCCCTGCGATTGCAAGTGTCGCT-GCGGAATCCCCCTCCGTCAGA 298438 | ||||| ||||| ||||| ||| || || | | | || || || |||||||| ||| Sbjct 521991 GTCCGACGACGGAAAGCCCACCGACAGC-AGAGGCTTTGGCAGAGTCTCCCTCCGTAAGA 521933 Query 298439 ATGAGAGTGCA 298449 ||||| ||||| Sbjct 521932 ATGAGCGTGCA 521922 >seq198 Length=283761 Score = 84.2 bits (92), Expect = 5e-11 Identities = 108/149 (72%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 243565 ATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTC 243624 || ||||||||| | ||| ||| | ||||||||||| || || || ||||| | | Sbjct 154363 ATCGGCATGAACGCACGACTTATGAGCCAGTACATCGAGTTTGTCGCTGACCGACTGCTG 154422 Query 243625 ATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTC 243684 | || || || | ||||| |||||| ||| || ||||| | ||| |||||| | Sbjct 154423 GTAGCCCTCGGGAACGAGAAGCACTACAACGCCACAAATCCCTTCGACTTCATGGAGAAC 154482 Query 243685 ATTTCGCTTCAAGGGAAAACTAACTTCTT 243713 |||||||| ||||| || || |||||||| Sbjct 154483 ATTTCGCTGCAAGGCAAGACAAACTTCTT 154511 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102874828182100