Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689995.1_202016-07-20] 366 sequences; 37,460,344 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq2 109 5e-19 seq312 91.5 1e-13 seq296 87.8 2e-12 seq327 86.0 6e-12 seq32 82.4 8e-11 >seq2 Length=120822 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| ||||||| | ||| || | |||| ||| || || || || ||||||||||| | Sbjct 12561 ACCACCGCGCAGACGAAGAACCAAGTGAAGCGTTGACTCCTTCTGGATGTTGTAATCAGA 12502 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||||| |||| || | |||||||||||| | ||||| ||||||||||| ||||| Sbjct 12501 AAGAGTGCGGCCGTCCTCCAACTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGAGG 12442 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| || || || || || || || ||| || || | || || | ||||| Sbjct 12441 AATGCCCTCCTTGTCCTGGATCTTCGTCTTCACGTTGTCGATAGTGTCTGATGATTCCAC 12382 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | |||||||||||| | || || ||||| || ||||| Sbjct 12381 CTCGAGTGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 12334 Score = 102 bits (112), Expect = 8e-17 Identities = 134/186 (72%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || ||||| ||||||||||| | | |||||| |||| || || ||||||||| Sbjct 11846 GTGGACTCCTTTTGGATGTTGTAATCGGAAAGGGTGCGGCCGTCCTCGAGTTGCTTGCCG 11787 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || | ||||| ||||||||||| |||||||| || || || ||||| || || ||| Sbjct 11786 GCGAAGATGAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCTTGGATCTTGGTCTTG 11727 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 ||| || | || || | || || || | || | ||||||||| |||| ||| Sbjct 11726 ACATTGTCAATGGTGTCTGAAGACTCAACCTCAAGGGTGATGGTCTTGCCAGTCAGAGTC 11667 Query 64427 TTTACG 64432 || ||| Sbjct 11666 TTAACG 11661 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300 |||| || || || || || ||||||||||| | | |||||| | || || | |||| Sbjct 7068 TGAAGAGTGGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCATCCTCCAACTGC 7127 Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360 |||||||| | || | || || ||||| |||||||| || || || || || || || Sbjct 7128 TTGCCGGCGAAGATCAATCGTTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTG 7187 Query 64361 TGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTC 64420 ||||||| || | || || | ||||| || | ||| | |||||||||||| Sbjct 7188 GTCTTTACATTGTCGATCGTGTCGGAGCTCTCCACCTCAAGAGTGATGGTCTTGCCGGTG 7247 Query 64421 AAAGTTTTTACGAAAATTTGCAT 64443 | || || |||||||| ||||| Sbjct 7248 AGGGTCTTGACGAAAATCTGCAT 7270 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300 |||| || || || || || ||||||||||| | | |||||| | || || | |||| Sbjct 7296 TGAAGAGTGGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCATCCTCCAACTGC 7355 Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360 |||||||| | || | || || ||||| |||||||| || || || || || || || Sbjct 7356 TTGCCGGCGAAGATCAATCGTTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTG 7415 Query 64361 TGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTC 64420 ||||||| || | || || | ||||| || | ||| | |||||||||||| Sbjct 7416 GTCTTTACATTGTCGATCGTGTCGGAGCTCTCCACCTCAAGAGTGATGGTCTTGCCGGTG 7475 Query 64421 AAAGTTTTTACGAAAATTTGCAT 64443 | || || |||||||| ||||| Sbjct 7476 AGGGTCTTGACGAAAATCTGCAT 7498 Score = 96.9 bits (106), Expect = 3e-15 Identities = 159/228 (70%), Gaps = 1/228 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| ||||| | | || || || |||| || || || || || |||||||| || | Sbjct 12333 ACCACCGCGGAGACGGAGAACAAGGTGAAGTGTGGACTCCTTCTGGATGTTGTAGTCGGA 12274 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || |||||| |||| || | |||||||||||| | ||||| ||||| ||||| || || Sbjct 12273 GAGGGTGCGGCCGTCCTCCAACTGCTTGCCGGCGAAGATGAGGCGCTGTTGGTCCGG-GG 12215 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || || || || ||||| || || ||| || || | || || || || || Sbjct 12214 GATACCCTCCTTGTCTTGGATCTTCGTCTTCACGTTGTCGATCGTGTCTGAGGACTCGAC 12155 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||| | ||| | ||||||||||| | || || ||||| || ||||| Sbjct 12154 TTCAAGAGTGATTGTCTTGCCGGTGAGCGTCTTGACGAAGATCTGCAT 12107 Score = 95.1 bits (104), Expect = 1e-14 Identities = 149/212 (70%), Gaps = 1/212 (0%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || | ||||| || || || |||||||||||||| || | | |||||| ||||| Sbjct 6832 AGGACCAAATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCCGAAAGGGTGCGGCCGTCT 6891 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || ||||||||||| || | || | || |||||||| || || || || || || || Sbjct 6892 TCGAGCTGCTTGCCCGCGAAGATCAATCGTTGCTGGTCCGG-GGGATGCCCTCCTTGTCC 6950 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| ||| || | || || | ||||| || | || | |||| Sbjct 6951 TGAATCTTCGTCTTGACATTGTCAATGGTGTCTGATGATTCCACCTCGAGTGTGATGGTC 7010 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||||||| | || || |||||||| ||||| Sbjct 7011 TTGCCGGTGAGGGTCTTGACGAAAATCTGCAT 7042 Score = 89.7 bits (98), Expect = 5e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || | ||||| || || || ||||| |||||||| || | || || || ||||| Sbjct 12773 AGGACCAAATGAAGTGTGGACTCCTTTTGGATGTTGTAGTCAGAGAGAGTACGTCCGTCT 12714 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || |||||||||||||| | || | || || ||||| |||||||| || || || || Sbjct 12713 TCGAGCTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCCGGAGGAATGCCCTCCTTGTCC 12654 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| ||| || | || || | || ||||| | || | ||| Sbjct 12653 TGAATCTTGGTCTTCACATTGTCGATGGTGTCTGAAGACTCGACTTCAAGGGTGATTGTC 12594 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||||||| | || || ||||| || ||||| Sbjct 12593 TTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 12562 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300 |||| || || || || || ||||||||||| | | |||||| | || || | |||| Sbjct 7524 TGAAGAGTGGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCATCCTCCAACTGC 7583 Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360 |||||||| | || | ||||| || || |||||||| || || || || || || || Sbjct 7584 TTGCCGGCGAAGATCAATCGCTGTTGATCCGGAGGAATGCCCTCCTTGTCCTGGATCTTG 7643 Query 64361 TGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTC 64420 ||||||| || | || || | || ||||| | ||| | ||||||||||| Sbjct 7644 GTCTTTACATTGTCGATCGTGTCTGAGCTCTCGACTTCGAGAGTGATAGTCTTGCCGGTG 7703 Query 64421 AAAGTTTTTACGAAAATTTGCAT 64443 | || || ||||| || ||||| Sbjct 7704 AGGGTCTTGACGAAGATCTGCAT 7726 Score = 87.8 bits (96), Expect = 2e-12 Identities = 139/198 (70%), Gaps = 1/198 (1%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGG-TGCGCGCGTCTTCAAGCTGCTTGCC 64305 || || || || || |||||||| || | || || | || |||| || |||||||| || Sbjct 12075 GTGGACTCCTTCTGGATGTTGTAGTCGGAGAAGGGTTCGGCCGTCCTCGAGCTGCTTTCC 12016 Query 64306 GGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTT 64365 ||| | || || ||||||||||| ||||| || || || || ||||| || || ||| Sbjct 12015 GGCGAAGATAAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCTTGGATCTTGGTCTT 11956 Query 64366 TACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGT 64425 ||| || | || || | || ||||| | || | |||||||||||| | || Sbjct 11955 GACATTGTCGATCGTGTCTGATGATTCAACTTCGAGTGTGATGGTCTTGCCGGTGAGGGT 11896 Query 64426 TTTTACGAAAATTTGCAT 64443 || ||||| || ||||| Sbjct 11895 CTTGACGAAGATCTGCAT 11878 Score = 86.0 bits (94), Expect = 6e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || || || |||||||| || | || ||| || |||| || |||||||| ||| Sbjct 7758 GTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCCTCGAGCTGCTTTCCG 7817 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || | || || ||||||||||| |||||||| || || || ||||| || ||| ||| Sbjct 7818 GCGAAGATAAGACGCTGCTGGTCCGGAGGAATGCCCTCCTTATCTTGGATCTTTGTCTTG 7877 Query 64367 AC 64368 || Sbjct 7878 AC 7879 >seq312 Length=215048 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||| | |||||| || || | ||||| || || || |||||||| || | Sbjct 143715 ACCACCACGCAGGCGAAGCACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGA 143656 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || || |||| || |||||||||||||| | ||||| ||||| ||||| || || Sbjct 143655 AAGAGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGTCGCTGTTGGTCCGGTGG 143596 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || ||||| || || || ||||| ||| || | || | | || | ||||| Sbjct 143595 GATACCTTCCTTGTCCTGGATTTTGGTCTTGACGGCGTCGATGGAGTCGGAAGACTCCAC 143536 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | ||||| || |||| || || ||||| || ||||| Sbjct 143535 CTCGAGGGTGATAGTCTTACCCGTCAGGGTCTTGACGAAGATCTGCAT 143488 >seq296 Length=257219 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 |||||| || | | || || || || | || ||||||||||| |||||||| || | Sbjct 193620 ACCGCCACGGAGACGGAGGACGAGGTGGAGGGTGGATTCTTTTTGGATGTTGTAGTCGGA 193561 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || || ||||||| |||||||||||||| | ||||| || || ||||| || || Sbjct 193560 TAGCGTTCGGCCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGTTGGTCTGGGGG 193501 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || || || || ||||| || || ||| || || | || || || || || Sbjct 193500 GATGCCCTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCAATCGTGTCGGAGGACTCTAC 193441 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | ||||||||| || | || || || || || ||||| Sbjct 193440 CTCGAGGGTGATGGTCTTGCCTGTGAGTGTCTTGACAAAGATCTGCAT 193393 >seq327 Length=173597 Score = 86.0 bits (94), Expect = 6e-12 Identities = 156/228 (68%), Gaps = 3/228 (1%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 |||||| |||| | ||| || || || | | | ||||| || |||||||| || | Sbjct 94569 ACCGCCACGCAGACGAAGGACAAGGTGGAGAGAC---TCTTTCTGGATGTTGTAGTCGGA 94513 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || |||||| |||| || || ||||||||||| | || || ||||| ||||| ||||| Sbjct 94512 GAGGGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATAAGGCGCTGTTGGTCCGGAGG 94453 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 | ||||| || || || || || || | || | ||||| | || || Sbjct 94452 GGTGCCTTCCTTGTCCTGGATCTTGGTCTGGCCGTTGTCGATCGTATCTGATGAATCGAC 94393 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||| | ||| | || ||||||||| | || || ||||| || ||||| Sbjct 94392 TTCAAGAGTGATGGCCTTGCCGGTGAGTGTCTTGACGAAGATCTGCAT 94345 >seq32 Length=96279 Score = 82.4 bits (90), Expect = 8e-11 Identities = 80/103 (78%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 155354 GTTGTAAGTTTCGATGGCGGCGTCAATGTCACGACCGTGTATACCGATCGCCACGCGCAT 155413 ||||||||| |||||||| |||| ||| || ||||| || |||| || || ||||| Sbjct 31781 GTTGTAAGTGTCGATGGCCTCGTCGATGGAACTCCCGTGGATGCCGACAGCAACTCGCAT 31722 Query 155414 CAGCATGTGTTGAATGCGCTCCGCAACGCGGCCGTTGATGCGC 155456 ||||||||||| |||||| || || ||||||||||||| Sbjct 31721 GAGCATGTGTTGGGGGCGCTCGGCGACCTTGCCGTTGATGCGC 31679 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499642514125040