Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689995.1_202016-07-20] 366 sequences; 37,460,344 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq32 248 9e-61 >seq32 Length=96279 Score = 248 bits (274), Expect = 9e-61 Identities = 998/1550 (64%), Gaps = 39/1550 (3%) Strand=Plus/Plus Query 93887 CCATGGCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTT 93946 ||||| || |||| ||||| |||||||| || || || || || ||||| ||||| | Sbjct 31805 CCATG-CCTCCCCCACCCTCTTCAACGCTGGTACACCCAACCCTCAAATGTCATCGTGCT 31863 Query 93947 TCCTGATGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTG 94006 ||||| | || | |||| |||||| ||| ||| || | ||||| |||||| ||| | Sbjct 31864 TCCTGGTCACCATGAAGGACGACTCGATCGACGGCATCTACGACACTCTCAAGACCTGCG 31923 Query 94007 CGACCATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGG 94066 | | ||| || || || || ||||| ||| ||||| | | |||| | | Sbjct 31924 CCATGATCAGCAAGACGGCTGGTGGCATCGGCCTCAACATCCACTGCATCCGTGGTACCG 31983 Query 94067 GTTCCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCT 94126 | || ||||| ||| || || || ||| ||||| |||| |||||||| || |||| Sbjct 31984 GCTCATACATTGCCGGAACTAACGGTGTCTCTAACGGTATCGTGCCTATGCTTCGCGTCT 32043 Query 94127 TCAACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGG 94186 |||||||| | || |||||||| || |||||||| | | | ||| | ||||| Sbjct 32044 TCAACAACACCGCTCGCTACGTCGATCAGGGTGGCAACAAGCGTCCAGGTGCCTTCGCCA 32103 Query 94187 TCTATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACG 94246 |||| | |||||||||||| | ||||| | ||| ||||||| | |||||||||| Sbjct 32104 TCTACATTGAGCCCTGGCACTCTGACGTCTTCGAGTTCCTCGACCTCAGGAAGAACCACG 32163 Query 94247 GCAACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTA 94306 |||| || || | ||| | || ||||||||||| || ||| | || ||| | || | Sbjct 32164 GCAAGGAGGAGGTCCGAGCCCGTGAGCTCTTCTACGCCCTTTGGATCCCTGACTTGTTCA 32223 Query 94307 TGAAACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGAC 94366 |||| || ||||| | ||| | ||| || | || ||| ||| || ||||| | Sbjct 32224 TGAAGCGAGTCGAACAGAACGGAGAGTGGTCGCTGATGTGCCCCGCTGAGTGCCCCGGTC 32283 Query 94367 TGTCCGACGTTTGTGGATCG-CGTTTTGAAGACT-TGTATGCTCGTTACGAATCGCAGGG 94424 | | || || | || || || || || || | || | ||||| |||| Sbjct 32284 TCGCTGATGTCTACGG--CGACGAGTTCGAGGCTCTCTACGAGAAGTACGAGCGTGAGGG 32341 Query 94425 CAAGGC---CAGGAAGGTTATGGATGCTAGGAAGCTGTGGGA-TCAGATCGTGGACGTAC 94480 || | | | || | | ||| ||||| ||| | | | || | || | | Sbjct 32342 TCGTGCTCGCCGAACCGTCA---AGGCTCAAAAGCTTTGGTACGCCGTTC-TCGAGGCTC 32397 Query 94481 AGGTGGAGACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACC 94540 || |||||| || | || | ||| | | ||||||| ||| ||| |||||| |||| Sbjct 32398 AGACGGAGACTGGCAACCCTTTCATGCTTTACAAGGACGCTGCTAACCGCAAGTCGAACC 32457 Query 94541 AGCAGCACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTT 94600 | || ||||||| |||||| |||| || |||||||| ||||| | ||||| | Sbjct 32458 AAAAGAACCTCGGCACCATCAAGTGCTCTAACCTGTGCACGGAGATCATGGAGTACAGCG 32517 Query 94601 CTCCGGACGAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAG 94660 ||||||| ||| | ||||| || ||||| | | || ||| | ||| ||| | | Sbjct 32518 CTCCGGATGAGGTCGCTGTCTGCAACCTTGCCAGTATGGCTCTGCCTTCTTACGT-CCAC 32576 Query 94661 AT-GCCT---ACACGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGA 94716 || | || ||||| || | | ||| | || |||| | || || Sbjct 32577 ATCGACTCGCACACGAACACAAGGACATACGACTTCAAGAAGCT------CCACGAGGTT 32630 Query 94717 AGGATGGTC--TTG----AACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCG 94770 | | |||| ||| ||||| |||| | | ||||| |||| |||||| || || Sbjct 32631 ACCAAGGTCGTTTGTGGCAACCTCAACAAGATCATCGATGTCAACTACTACCCTGTTCCC 32690 Query 94771 GAGGCGGAGAACTCAAACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCG 94830 |||||| |||| || ||| || || || |||||||| ||||| ||| | ||| |||| Sbjct 32691 GAGGCGAAGAAGTCCAACATGCGCCACCGCCCCATCGGTATCGGAGTCAACGGTCTCGCC 32750 Query 94831 GACGCGCTGGTGATGATGCGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTG 94890 ||||| | |||| ||| || ||| |||| ||| || | | || | Sbjct 32751 GACGCTTTCATGATCATGGGTTACGCCTTCGACAGCCCCGAGGCCAAGAAGCTCAACATC 32810 Query 94891 AACATATTCGAAAGCATTTATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCG 94950 | || ||||| | || || ||| || | | | ||| | | | |||| | Sbjct 32811 CAGATCTTCGAGACGATCTACCACGCCGCTCTCGAGCGATCGTGCGAGCTCGCCA---AG 32867 Query 94951 GACGGCGGGCCACACGAATCGTTCCGCGGATCGCCCTTGGAAC-AGGGCATTTTTCAGTT 95009 || |||| | |||| | | || || |||| | | ||||| | || | Sbjct 32868 GAGCTCGGGACCTACGAGAC-ATACGAGGGCAGCCCAACCAGCAAGGGCGAGCTGCAATA 32926 Query 95010 CGACCTCTGGGGTGTGAAGCCCTCGGGTCTGTACGACTGGGAAGCTCT-ACGCGCTGATG 95068 ||| |||||||| || | ||| || || | ||||||| | | | |||| | Sbjct 32927 CGATCTCTGGGGAGTCACTCCCAGTGGACTCTGGGACTGGGCCGAAATCAAGCGC-AACA 32985 Query 95069 TTATCAAACACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGG 95128 || | ||||||| | |||| | || || | ||||| |||||||| || || || Sbjct 32986 TTGCCGCACACGGTCTCCGAAACTCTCTCCTGCTCGCCCCTATGCCCACTGCTTCGACAA 33045 Query 95129 CGCAGATCCTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGC 95188 |||||||| ||| |||||||| || || || | ||| |||| | |||| | | | Sbjct 33046 GTCAGATCCTCGGCTTCAACGAGTGCTTTGAGCCTTACACGAGCAACCTTTACACCCGAC 33105 Query 95189 GGGTGCTCGCCGGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGA-CCTGACGTCT 95247 | ||||||||||| || |||| ||| ||||| || || || || | || || Sbjct 33106 GTGTGCTCGCCGGCGAGTTCCAAGTCGTCAACCCTTGGCTGCTGCGTGAGCTTGTCG-AG 33164 Query 95248 CTGGGTGTGTGGGGTGACAAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAG 95307 | ||| ||||| || || | ||||||| | || | | |||||| ||||| Sbjct 33165 CAAGGTCTGTGGAACGAACAGATGAAGAACCGCATCATAGCCCACGGCGGCTCGATCCAG 33224 Query 95308 AACATCCCGCAAATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCG 95367 ||| | || || || || ||||||||| || |||||||| |||||||||||| || Sbjct 33225 AACGTGCCCGGCATTCCCGACCGCATCAAGGCACTGTACAAGACAGTGTGGGAGATCTCG 33284 Query 95368 CAGCGCGTGATACTCGACCACGCGGCCGCCCGCGGGCCCTTCATCTGCCA 95417 ||| || || ||||| || |||| ||| || |||| |||||||| Sbjct 33285 CAGAAGGTCATCATCGACATGGCTGCCGACCGAGGTGCCTTTATCTGCCA 33334 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494720936641360