Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689995.1_202016-07-20] 366 sequences; 37,460,344 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq32 156 7e-33 >seq32 Length=96279 Score = 156 bits (172), Expect = 7e-33 Identities = 333/491 (68%), Gaps = 11/491 (2%) Strand=Plus/Minus Query 203845 CACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATG-CCGGTCT 203903 |||||||||||| |||||||| | ||||| | | ||| || ||||| | || |||| Sbjct 33480 CACCGTGAACTGGATGGCGTTGGCAGCAGGTCGGGTTCGGAGGTAGTATGTTTCCCGTCT 33421 Query 203904 TTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGG 203963 | | ||||||| ||| ||||| | ||||||| | || | || | | |||| | Sbjct 33420 TCAATCCCTTCTTCCAGCCGTAGAAGTGCATGCTCGTAAGCTGGCCAAAGCTGGGTGCTT 33361 Query 203964 CCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGGCCATA 204022 | ||| ||||||||| || |||| ||| |||||| || || || || ||||| Sbjct 33360 GGAGGTGGATGTTCAGACTTTGAGATTGGCAGAT-AAAGGCACCTCGGTCGGCAGCCATG 33302 Query 204023 TTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGTGTGTTGA 204082 | ||| ||| ||||||||| ||||||||||| |||||| ||| | || || | | Sbjct 33301 TCGATGATGACCTTCTGCGAGATCTCCCACACTGTCTTGTACAGTGCCTTGATGCGGTCG 33242 Query 204083 GGCACATCTTCC---CACGTCCT-GATCGAGCCGTTGTCGGCCATCAGTCTCATCCTCGT 204138 || | | || ||||| || |||||||||| || ||| || | | || || | Sbjct 33241 GGAA----TGCCGGGCACGTTCTGGATCGAGCCGCCGTGGGCTATGATGCGGTTCTTCAT 33186 Query 204139 CTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGATCTG 204198 || || ||||| || | || ||||| |||| ||| ||||||| || || Sbjct 33185 CTGTTCGTTCCACAGACCTTGCTCGACAAGCTCACGCAGCAGCCAAGGGTTGACGACTTG 33126 Query 204199 AAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGCCTC 204258 || || |||| ||||| | ||||||| | |||||| | ||| | || || || ||| Sbjct 33125 GAACTCGCCGGCGAGCACACGTCGGGTGTAAAGGTTGCTCGTGTAAGGCTCAAAGCACTC 33066 Query 204259 GTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGAGTT 204318 |||| ||||| |||||| || || |||||||| || || || || || ||||| Sbjct 33065 GTTGAAGCCGAGGATCTGACTTGTCGAAGCAGTGGGCATAGGGGCGAGCAGGAGAGAGTT 33006 Query 204319 GCGCACACCGT 204329 || | ||||| Sbjct 33005 TCGGAGACCGT 32995 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795151562164960