Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689995.1_202016-07-20] 366 sequences; 37,460,344 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq2 138 1e-27 seq296 136 4e-27 seq312 123 3e-23 seq359 120 3e-22 seq327 107 2e-18 >seq2 Length=120822 Score = 138 bits (152), Expect = 1e-27 Identities = 148/193 (77%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||| || || |||||||| |||| || | ||||||||||||||| Sbjct 12525 CTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCGTCCTCCAACTGCTTGCCGGCGAA 12466 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | |||||||||||| | || | || |||||||||| ||||||| |||| | ||| Sbjct 12465 GATGAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTCGTCTTCA-CGT 12407 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | ||||| |||||||| || | |||||||| ||||| || || || || | Sbjct 12406 TGTCGATAGTGTCTGATGATTCCACCTCGAGTGTGATGGTCTTGCCGGTGAGGGTCTTGA 12347 Query 46581 CAAAGATTTGCAT 46593 | ||||| ||||| Sbjct 12346 CGAAGATCTGCAT 12334 Score = 136 bits (150), Expect = 4e-27 Identities = 157/210 (75%), Gaps = 1/210 (0%) Strand=Plus/Minus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATA-GAGTGCGCTCGTCGTC 46443 |||| |||||||| |||||| ||||| ||||||||||| | | || || |||| || Sbjct 12087 ACCAAGTGCAATGTGGACTCCTTCTGGATGTTGTAGTCGGAGAAGGGTTCGGCCGTCCTC 12028 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 ||||||||| |||||||| || | |||||||||||| | || | || ||||||||| Sbjct 12027 GAGCTGCTTTCCGGCGAAGATAAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCTTG 11968 Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 |||||| |||||| | | | |||||| ||||| || || | |||||||| || Sbjct 11967 GATCTTGGTCTTGACATTGTCGATCGTGTCTGATGATTCAACTTCGAGTGTGATGGTCTT 11908 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||| || || || || || ||||| ||||| Sbjct 11907 GCCGGTGAGGGTCTTGACGAAGATCTGCAT 11878 Score = 131 bits (144), Expect = 2e-25 Identities = 145/192 (76%), Gaps = 1/192 (1%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 ||||||||| || |||||||| || || ||||| |||| |||||||||||||| ||||| Sbjct 6852 CTCCTTTTGAATGTTGTAGTCCGAAAGGGTGCGGCCGTCTTCGAGCTGCTTGCCCGCGAA 6911 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 ||||| || |||||||| | || | || |||||||||| |||||| |||||| | Sbjct 6912 GATCAATCGTTGCTGGTCCG-GGGGATGCCCTCCTTGTCCTGAATCTTCGTCTTGACATT 6970 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | ||||| |||||||| || | |||||||| ||||| || || || || || Sbjct 6971 GTCAATGGTGTCTGATGATTCCACCTCGAGTGTGATGGTCTTGCCGGTGAGGGTCTTGAC 7030 Query 46582 AAAGATTTGCAT 46593 || || ||||| Sbjct 7031 GAAAATCTGCAT 7042 Score = 131 bits (144), Expect = 2e-25 Identities = 147/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 |||| |||| ||| |||||||||||| ||||| ||||| || ||||| |||| ||| Sbjct 11858 ACCAAGTGCAGTGTGGACTCCTTTTGGATGTTGTAATCGGAAAGGGTGCGGCCGTCCTCG 11799 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 || |||||||||||||| || | |||||||||||| | || | || ||||||||| | Sbjct 11798 AGTTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCTTGG 11739 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564 ||||| |||||| | | | ||||| || || || || | |||||||| ||| Sbjct 11738 ATCTTGGTCTTGACATTGTCAATGGTGTCTGAAGACTCAACCTCAAGGGTGATGGTCTTG 11679 Query 46565 CCCGTCAGCGTTTTAAC 46581 || ||||| || ||||| Sbjct 11678 CCAGTCAGAGTCTTAAC 11662 Score = 127 bits (140), Expect = 2e-24 Identities = 169/235 (72%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 46359 ATTATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGT 46418 || ||| ||| || | | ||| | |||| ||| | ||| |||||||||||| |||| Sbjct 12796 ATCATTGGCCACCGCGGAGACGGAGGACCAAATGAAGTGTGGACTCCTTTTGGATGTTGT 12737 Query 46419 AGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGT 46478 |||| || ||||| || |||| |||||||||||||||||||| ||||| || || |||| Sbjct 12736 AGTCAGAGAGAGTACGTCCGTCTTCGAGCTGCTTGCCGGCGAAGATCAATCGTTGTTGGT 12677 Query 46479 CGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCG 46538 | | || | || |||||||||| ||||| |||| | | | | ||||| | Sbjct 12676 CCGGAGGAATGCCCTCCTTGTCCTGAATCTTGGTCTTCACATTGTCGATGGTGTCTGAAG 12617 Query 46539 ATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | || || || | ||||| || ||||| || || || || || ||||| ||||| Sbjct 12616 ACTCGACTTCAAGGGTGATTGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 12562 Score = 122 bits (134), Expect = 1e-22 Identities = 145/193 (75%), Gaps = 3/193 (2%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||||||||| || ||||| |||| || | ||||||||||||||| Sbjct 12297 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCCAACTGCTTGCCGGCGAA 12238 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | |||||| ||||| | || | | ||||||||| ||||||| |||| | ||| Sbjct 12237 GATGAGGCGCTGTTGGTCCG-GGGGATACCCTCCTTGTCTTGGATCTTCGTCTTCA-CGT 12180 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | |||||| || || || || | ||||| || ||||| || ||||| || | Sbjct 12179 TGTCGATCGTGTCTGAGGACTCGACTTCAAGAGTGATTGTCTTGCCGGTGAGCGTCTTGA 12120 Query 46581 CAAAGATTTGCAT 46593 | ||||| ||||| Sbjct 12119 CGAAGATCTGCAT 12107 Score = 116 bits (128), Expect = 4e-21 Identities = 147/198 (74%), Gaps = 3/198 (2%) Strand=Plus/Plus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 |||| |||||||| |||||| ||||| ||||||||||| || || || |||| ||| Sbjct 7746 ACCAAGTGCAATGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCCTCG 7805 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 |||||||| |||||||| || | ||||||||||| | || | || |||||| || | Sbjct 7806 AGCTGCTTTCCGGCGAAGATAAGACGCTGCTGGTCCGGAGGAATGCCCTCCTTATCTTGG 7865 Query 46505 ATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 ||||| |||||| ||| | | | |||||| || || || || | |||||||| || Sbjct 7866 ATCTTTGTCTTGA-CGTTGTCAATGGTGTCGGAGGACTCAACCTCAAGGGTGATGGTCTT 7924 Query 46564 GCCCGTCAGCGTTTTAAC 46581 | | ||||| || || || Sbjct 7925 G-CAGTCAGAGTCTTGAC 7941 Score = 114 bits (126), Expect = 1e-20 Identities = 143/195 (73%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||| ||||| || ||||| | || || | ||||||||||||||| Sbjct 7079 CTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCATCCTCCAACTGCTTGCCGGCGAA 7138 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 ||||| || || ||||| | || | || |||||||||| |||||| |||| | | Sbjct 7139 GATCAATCGTTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTTACATT 7198 Query 46522 CGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTT 46578 | | |||||| |||| ||||| || | |||||||| ||||| || || || || Sbjct 7199 GTCGATCGTGTCGGAGCTC---TCCACCTCAAGAGTGATGGTCTTGCCGGTGAGGGTCTT 7255 Query 46579 AACAAAGATTTGCAT 46593 || || || ||||| Sbjct 7256 GACGAAAATCTGCAT 7270 Score = 114 bits (126), Expect = 1e-20 Identities = 143/195 (73%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||| ||||| || ||||| | || || | ||||||||||||||| Sbjct 7307 CTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCATCCTCCAACTGCTTGCCGGCGAA 7366 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 ||||| || || ||||| | || | || |||||||||| |||||| |||| | | Sbjct 7367 GATCAATCGTTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTTACATT 7426 Query 46522 CGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTT 46578 | | |||||| |||| ||||| || | |||||||| ||||| || || || || Sbjct 7427 GTCGATCGTGTCGGAGCTC---TCCACCTCAAGAGTGATGGTCTTGCCGGTGAGGGTCTT 7483 Query 46579 AACAAAGATTTGCAT 46593 || || || ||||| Sbjct 7484 GACGAAAATCTGCAT 7498 Score = 109 bits (120), Expect = 6e-19 Identities = 142/195 (73%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||| ||||| || ||||| | || || | ||||||||||||||| Sbjct 7535 CTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCATCCTCCAACTGCTTGCCGGCGAA 7594 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 ||||| ||||| || || | || | || |||||||||| |||||| |||| | | Sbjct 7595 GATCAATCGCTGTTGATCCGGAGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTTACATT 7654 Query 46522 CGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTT 46578 | | |||||| |||| || || || | ||||| || ||||| || || || || Sbjct 7655 GTCGATCGTGTCTGAGCTC---TCGACTTCGAGAGTGATAGTCTTGCCGGTGAGGGTCTT 7711 Query 46579 AACAAAGATTTGCAT 46593 || ||||| ||||| Sbjct 7712 GACGAAGATCTGCAT 7726 >seq296 Length=257219 Score = 136 bits (150), Expect = 4e-27 Identities = 147/192 (77%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 || |||||||| |||||||||||||| || || |||| |||||||||||||||||||| Sbjct 193583 TCTTTTTGGATGTTGTAGTCGGATAGCGTTCGGCCGTCTTCGAGCTGCTTGCCGGCGAAG 193524 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 || | || || ||||| | || | || ||||||||| |||||| |||||| ||| Sbjct 193523 ATGAGACGTTGTTGGTCTGGGGGGATGCCCTCCTTGTCTTGGATCTTGGTCTTGA-CGTT 193465 Query 46523 G-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | | ||||||| || || || || | |||||||| ||||| || || || || || Sbjct 193464 GTCAATCGTGTCGGAGGACTCTACCTCGAGGGTGATGGTCTTGCCTGTGAGTGTCTTGAC 193405 Query 46582 AAAGATTTGCAT 46593 |||||| ||||| Sbjct 193404 AAAGATCTGCAT 193393 >seq312 Length=215048 Score = 123 bits (136), Expect = 3e-23 Identities = 145/194 (75%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||| || ||||| || |||| |||||||||||||||||||| Sbjct 143679 CTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAA 143620 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGA--GC 46519 || | ||||| ||||| | || | | ||||||||| ||| || |||||| || Sbjct 143619 GATGAGTCGCTGTTGGTCCGGTGGGATACCTTCCTTGTCCTGGATTTTGGTCTTGACGGC 143560 Query 46520 GTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTA 46579 |||| | | |||| || ||||| || | ||||| || || |||||||| || || Sbjct 143559 GTCG--ATGGAGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTACCCGTCAGGGTCTTG 143502 Query 46580 ACAAAGATTTGCAT 46593 || ||||| ||||| Sbjct 143501 ACGAAGATCTGCAT 143488 >seq359 Length=210429 Score = 120 bits (132), Expect = 3e-22 Identities = 137/182 (75%), Gaps = 4/182 (2%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||||||||| |||||||| |||| |||||||||||||||||||| Sbjct 42496 CTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGACCGTCCTCGAGCTGCTTGCCGGCGAA 42437 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGA--GC 46519 || | ||||| ||||| | || | | ||||||||| |||||| |||||| || Sbjct 42436 GATGAGACGCTGTTGGTCCGGGGGGATACCTTCCTTGTCCTGGATCTTGGTCTTGACGGC 42377 Query 46520 GTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTA 46579 |||| | | |||| ||| || || || | ||||| || ||||| || || || || Sbjct 42376 GTCG--ATGGAGTCGGACGACTCGACCTCGAGGGTGATCGTCTTGCCGGTGAGGGTCTTG 42319 Query 46580 AC 46581 || Sbjct 42318 AC 42317 >seq327 Length=173597 Score = 107 bits (118), Expect = 2e-18 Identities = 141/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 ||| || ||||| ||||||||||| || ||||| |||| ||||| |||||||||||||| Sbjct 94536 CTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAA 94477 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | |||||| ||||| | || || ||||||||| |||||| || || ||| Sbjct 94476 GATAAGGCGCTGTTGGTCCGGAGGGGTGCCTTCCTTGTCCTGGATCTTGGTC-TGGCCGT 94418 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | ||| || || || || || | ||||||| ||||| || || || || | Sbjct 94417 TGTCGATCGTATCTGATGAATCGACTTCAAGAGTGATGGCCTTGCCGGTGAGTGTCTTGA 94358 Query 46581 CAAAGATTTGCAT 46593 | ||||| ||||| Sbjct 94357 CGAAGATCTGCAT 94345 Score = 84.2 bits (92), Expect = 2e-11 Identities = 69/84 (82%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 46396 TGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCC 46455 |||| ||||||| |||| ||||||||||| |||| ||| || || |||| ||||||||| Sbjct 94314 TGTAGACTCCTTTGGGATGTTGTAGTCGGAGAGAGCGCGGTCATCCTCGATCTGCTTGCC 94255 Query 46456 GGCGAATATCAAGCGCTGCTGGTC 46479 ||||| || | |||| ||||||| Sbjct 94254 TGCGAAGATAAGGCGCCGCTGGTC 94231 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565235814034320