Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689995.1_202016-07-20] 366 sequences; 37,460,344 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq2 84.2 2e-11 >seq2 Length=120822 Score = 84.2 bits (92), Expect = 2e-11 Identities = 158/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552 || || || | ||| || ||||| || | |||| || || || || || ||||||| Sbjct 7500 CCACCGCGGAGACGGAGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCGGAA 7559 Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612 | ||| |||| ||||| || || ||| | || || || ||||| ||||||| || Sbjct 7560 AGGGTGCGGCCATCCTCCAACTGCTTGCCGGCGAAGATCAATCGCTGTTGATCCGGAGGA 7619 Query 39613 ACGCCTTCTTTGTCGCATATTTTT-TGTTTA-ATCGTCGCTACTGTGTCTGCGCTTTCCA 39670 | ||| || ||||| || || | |||| || |||| | ||||||| ||| || | Sbjct 7620 ATGCCCTCCTTGTCCTGGATCTTGGTCTTTACATTGTCGATC--GTGTCTGAGCTCTCGA 7677 Query 39671 CGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 | || | ||| || || || || || | || || |||||||||||||| Sbjct 7678 CTTCGAGAGTGATAGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 7726 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347368050514478