Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689995.1_202016-07-20] 366 sequences; 37,460,344 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq32 187 3e-42 seq198 118 1e-21 >seq32 Length=96279 Score = 187 bits (206), Expect = 3e-42 Identities = 475/716 (66%), Gaps = 15/716 (2%) Strand=Plus/Plus Query 111705 TTCATCCACGCAACACCAACCCTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGT 111764 |||| ||| || | || ||||||||||||||||||||||| | || |||||||| Sbjct 31800 TTCACCCATGCCTCCCCCACCCTCTTCAACGCTGGTACACCCAACCCTCAAATGTCATCG 31859 Query 111765 TGTTTCCTTATTGCAAACAAGGAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAA 111824 || ||||| | | | ||||| || || ||| | ||||| |||| |||||||| Sbjct 31860 TGCTTCCTGGTCACCATGAAGGACGACTCGATCGACGGCATCTACGACACTCTCAAGACC 31919 Query 111825 TGTGCCCAAATCTCAAAGTGGGCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCC 111884 || ||| ||| ||| ||||||||| ||||| | ||||||| || | | Sbjct 31920 TGCGCCATGATCAGCAAGACGGCTGGTGGCATCGGCCTCAACATCCACTGCATCCGTGGT 31979 Query 111885 AACAAGTCTCGTA--TTAGAGGTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTC 111942 | | | ||| || || || || || ||| || | ||||| | || ||||||| Sbjct 31980 ACC--GGCTCATACATTGCCGGAACTAACGGTGTCTCTAACGGTATCGTGCCTATGCTTC 32037 Query 111943 GCGTATTTAACGCCACAGCGCGCTATGTAAACCAAGCTGG------GCGTCGCAAGGGAT 111996 |||| || ||| ||| || ||||| || | || | ||| ||||| || || Sbjct 32038 GCGTCTTCAACAACACCGCTCGCTACGTCGATCAGGGTGGCAACAAGCGTC-CA--GGTG 32094 Query 111997 CTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTC 112056 | |||| |||| ||||||| |||||| | || || | |||||||| || | | Sbjct 32095 CCTTCGCCATCTACATTGAGCCCTGGCACTCTGACGTCTTCGAGTTCCTCGACCTCAGGA 32154 Query 112057 TCAACCAAGGTGATGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAG 112116 ||||| || | ||||||| || ||| || ||||||| ||| || ||||| || | Sbjct 32155 AGAACCACGGCAAGGAGGAGGTCCGAGCCCGTGAGCTCTTCTACGCCCTTTGGATCCCTG 32214 Query 112117 ATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGG 112176 | | ||||||||| |||| || ||| || | ||||| || | || || | || Sbjct 32215 ACTTGTTCATGAAGCGAGTCGAACAGAACGGAGAGTGGTCGCTGATGTGCCCCGCTGAGT 32274 Query 112177 CACCCGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGG 112236 ||||||||| | |||| | || || ||||| || || |||||| ||||||||| Sbjct 32275 GCCCCGGTCTCGCTGATGTCTACGGCGACGAGTTCGAGGCTCTCTACGAGAAGTACGAGC 32334 Query 112237 AAGAAAGTCGGGCGACTGCG-ACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAG 112295 || |||| || | || || || ||| | | ||| | || ||||| || Sbjct 32335 GTGAGGGTCGTGC-TCGCCGAACCGTCAAGGCTCAAAAGCTTTGGTACGCCGTTCTCGAG 32393 Query 112296 TCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGT 112355 |||| || |||||||| | || | ||||||||||| ||||| ||||| ||| Sbjct 32394 GCTCAGACGGAGACTGGCAACCCTTTCATGCTTTACAAGGACGCTGCTAACCGCAAGTCG 32453 Query 112356 AATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGA 112411 || |||||||| | || |||||| | || ||||| || || || ||| |||| Sbjct 32454 AACCAAAAGAACCTCGGCACCATCAAGTGCTCTAACCTGTGCACGGAGATCATGGA 32509 >seq198 Length=283761 Score = 118 bits (130), Expect = 1e-21 Identities = 121/158 (77%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 102174 TTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTC 102233 ||||| ||||| || | || ||||| || ||||| ||||||||||| || || ||| Sbjct 154087 TTTGCCGAGCGCCTGGTTGCCTTTGCTGCCGTAGAGGGCATCTTCTTCTCCGGCTCTTTC 154146 Query 102234 TGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAG 102293 | | || | |||||||||||||| ||||||||||| |||||| ||||||||||||| Sbjct 154147 GCCTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTCACCTTCTCCAACGAG 154206 Query 102294 CTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331 || ||| || |||||||| || ||| || ||||| Sbjct 154207 CTCATCAGCCGAGACGAGGGTCTGCACACCGACTTTGC 154244 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620739560103520