Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689995.1_202016-07-20] 366 sequences; 37,460,344 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq32 174 2e-38 seq198 105 8e-18 >seq32 Length=96279 Score = 174 bits (192), Expect = 2e-38 Identities = 556/848 (66%), Gaps = 27/848 (3%) Strand=Plus/Minus Query 106478 TTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAA 106537 ||||| ||||| ||||||| | | ||||||| | || || || |||| ||| || Sbjct 32542 TTGCAGACAGCGACCTCATCCGGAGCGCTGTACTCCATGATCTCCGTGCACAGGTTAGAG 32483 Query 106538 CTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTT-GCACGCATCCTTGTAGAG 106596 | ||| || || || | ||||||||||| ||| ||| ||| || |||||||| || Sbjct 32482 CACTTGATGGTGCCGAGGTTCTTTTGGTTCGACTTGCGGTTAGCA-GCGTCCTTGTAAAG 32424 Query 106597 CATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA-CATCGGCGG 106655 |||| | || | || ||||||||||| | || ||||| || | ||| | | | | | Sbjct 32423 CATGAAAGGGTTGCCAGTCTCCGTCTGAGCCTCGAGAACGGCGTACCAAAGCTTTTGAGC 32364 Query 106656 CTGGTACAAT--GGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAA 106713 || | || | |||| || || ||||| ||||||||| |||||| || || || Sbjct 32363 CTTG-ACGGTTCGGCG--AGCACGACCCTCACGCTCGTACTTCTCGTAGAGAGCCTCGAA 32307 Query 106714 CTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTG 106773 ||| || || | || | |||||| || || | || || | || ||||| | Sbjct 32306 CTCGTCGCCGTAGACATCAGCGAGACCGGGGCACTCAGCGGGGCACATCAGCGACCACTC 32247 Query 106774 ACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATC 106833 || || || || ||||||||||| | ||| || ||||| |||| | ||||| || Sbjct 32246 TCCGTTCTGTTCGACTCGCTTCATGAACAAGTCAGGGATCCAAAGGGCGTAGAAGAGCTC 32187 Query 106834 TCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATC 106893 | || |||| || | || ||||| | | || |||||||| | || || Sbjct 32186 ACGGGCTCGGACCTCCTCCTTGCCGTGGTTCTTCCTGAGGTCGAGGAACTCGAAGACGTC 32127 Query 106894 CGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC------CCAGCTTG 106947 | |||||| ||||||| |||| |||| | || | ||||| ||| | || Sbjct 32126 AGAGTGCCAGGGCTCAATGTAGATGGCGAAGGCACC---TGGACGCTTGTTGCCACCCTG 32070 Query 106948 ATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTG 107007 || || ||||| || ||| ||| || ||||||||||| || | ||||| | || Sbjct 32069 ATCGACGTAGCGAGCGGTGTTGTTGAAGACGCGAAGCATAGGCACGATACCGTTAGAGAC 32010 Query 107008 ACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCAC--AT-CA-TGGATGTGCATCC 107063 ||| || || || ||| | | | | | ||| || || ||||||| | | Sbjct 32009 ACCGTTAGTTCCGGCAAT----GTATGAGCCGGTACCACGGATGCAGTGGATGTTGAGGC 31954 Query 107064 CAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGT 107123 | || || |||||| ||| ||| || || | | ||||| | ||||| |||| Sbjct 31953 CGATGCCACCAGCCGTCTTGCTGATCATGGCGCAGGTCTTGAGAGTGTCGTAGATGCCGT 31894 Query 107124 TGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTAC 107183 ||| ||||| ||||| ||| || |||||||| ||||| || || | ||||||| Sbjct 31893 CGATCGAGTCGTCCTTCATGGTGACCAGGAAGCACGATGACATTTGAGGGTTGGGTGTAC 31834 Query 107184 CAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTCGTAT 107242 |||| ||||||||||| || | || || |||| ||| | | ||||| || ||| Sbjct 31833 CAGCGTTGAAGAGGGTGGGGGAGGCATGGGTGAA-GTACTTCTCCGACATGAGGTTGTAA 31775 Query 107243 GTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATG 107302 || || | | | || ||| |||||||||||||| || || ||||| | |||| Sbjct 31774 GTGTCGATGGCCTCGTCGATGGAACTCCCGTGGATGCCGACAGCAACTCGCATGAGCATG 31715 Query 107303 TATTGGGG 107310 | |||||| Sbjct 31714 TGTTGGGG 31707 >seq198 Length=283761 Score = 105 bits (116), Expect = 8e-18 Identities = 118/158 (75%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 117274 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCT 117333 ||||| || ||| |||||||| |||||| || || || || |||||| || || Sbjct 154244 GCAAAGTCGGTGTGCAGACCCTCGTCTCGGCTGATGAGCTCGTTGGAGAAGGTGAGACCG 154185 Query 117334 GGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATA 117393 ||||||||||| |||||||| | ||| | || | | ||| || |||||||||||||| Sbjct 154184 GGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAAGAGCCGGAGAAGAAGATG 154125 Query 117394 CCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAA 117431 ||||| || ||||| |||| ||||||||||| || Sbjct 154124 CCCTCTACGGCAGCAAAGGCAACCAGGCGCTCGGCAAA 154087 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589978100837840