Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689995.1_202016-07-20] 366 sequences; 37,460,344 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq2 159 8e-34 seq296 156 9e-33 seq312 143 6e-29 seq359 123 6e-23 seq327 114 3e-20 >seq2 Length=120822 Score = 159 bits (176), Expect = 8e-34 Identities = 157/203 (77%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 ||||| |||||||| ||||| || ||||| || | ||||| | || |||||||||||| Sbjct 12764 TGAAGTGTGGACTCCTTTTGGATGTTGTAGTCAGAGAGAGTACGTCCGTCTTCGAGCTGC 12705 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 || || |||||||| | |||||||||||| ||||||||||| || ||||| ||||| || Sbjct 12704 TTGCCGGCGAAGATCAATCGTTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGAATCTTG 12645 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117 ||| || || || |||||||| ||| || ||||||||||| | ||||| || || Sbjct 12644 GTCTTCACATTGTCGATGGTGTCTGAAGACTCGACTTCAAGGGTGATTGTCTTGCCGGTG 12585 Query 195118 AAAGTTTTTACGAACACTTGCAT 195140 | || || ||||| | ||||| Sbjct 12584 AGGGTCTTGACGAAGATCTGCAT 12562 Score = 154 bits (170), Expect = 3e-32 Identities = 150/193 (78%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| || |||||||| ||||| || |||||||||| ||| || | || || ||||| || Sbjct 11853 GTGCAGTGTGGACTCCTTTTGGATGTTGTAATCGGAAAGGGTGCGGCCGTCCTCGAGTTG 11794 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || |||||||| || || || ||||| ||||||||||| || |||||||| || || Sbjct 11793 CTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCTTGGATCTT 11734 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 |||||| || ||||||||||| ||| || || |||||||| | ||||| || || Sbjct 11733 GGTCTTGACATTGTCAATGGTGTCTGAAGACTCAACCTCAAGGGTGATGGTCTTGCCAGT 11674 Query 195117 CAAAGTTTTTACG 195129 || ||| || ||| Sbjct 11673 CAGAGTCTTAACG 11661 Score = 152 bits (168), Expect = 1e-31 Identities = 156/204 (76%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||||||||||||||| || || || |||||||||| ||| || | ||||| || | ||| Sbjct 7067 GTGAAGAGTGGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCATCCTCCAACTG 7126 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || |||||||| | |||||||||||| ||||||||||| || ||||| || || || Sbjct 7127 CTTGCCGGCGAAGATCAATCGTTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTT 7186 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||| || || || || ||||| || || ||||| ||||| || | ||||| || || Sbjct 7187 GGTCTTTACATTGTCGATCGTGTCGGAGCTCTCCACCTCAAGAGTGATGGTCTTGCCGGT 7246 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 | || || ||||| | ||||| Sbjct 7247 GAGGGTCTTGACGAAAATCTGCAT 7270 Score = 152 bits (168), Expect = 1e-31 Identities = 156/204 (76%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||||||||||||||| || || || |||||||||| ||| || | ||||| || | ||| Sbjct 7295 GTGAAGAGTGGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCATCCTCCAACTG 7354 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || |||||||| | |||||||||||| ||||||||||| || ||||| || || || Sbjct 7355 CTTGCCGGCGAAGATCAATCGTTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTT 7414 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||| || || || || ||||| || || ||||| ||||| || | ||||| || || Sbjct 7415 GGTCTTTACATTGTCGATCGTGTCGGAGCTCTCCACCTCAAGAGTGATGGTCTTGCCGGT 7474 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 | || || ||||| | ||||| Sbjct 7475 GAGGGTCTTGACGAAAATCTGCAT 7498 Score = 150 bits (166), Expect = 4e-31 Identities = 156/203 (77%), Gaps = 1/203 (0%) Strand=Plus/Plus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 |||||||||||||| |||||||| ||||| || | ||| || | || |||||||||||| Sbjct 6841 TGAAGAGTGGACTCCTTTTGAATGTTGTAGTCCGAAAGGGTGCGGCCGTCTTCGAGCTGC 6900 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 || || |||||||| | |||||| ||||| || || ||||| || ||||| ||||| || Sbjct 6901 TTGCCCGCGAAGATCAATCGTTGCTGGTCCGG-GGGATGCCCTCCTTGTCCTGAATCTTC 6959 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117 |||||| || ||||||||||| || |||||| || || || | ||||| || || Sbjct 6960 GTCTTGACATTGTCAATGGTGTCTGATGATTCCACCTCGAGTGTGATGGTCTTGCCGGTG 7019 Query 195118 AAAGTTTTTACGAACACTTGCAT 195140 | || || ||||| | ||||| Sbjct 7020 AGGGTCTTGACGAAAATCTGCAT 7042 Score = 143 bits (158), Expect = 6e-29 Identities = 152/199 (76%), Gaps = 1/199 (1%) Strand=Plus/Plus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| | ||| | |||||||| || || || ||||| |||| || |||| || || || Sbjct 7745 AACCAAGTGCAATGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCCTC 7804 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 ||||||||| || ||||||||||| || || ||||| ||||||||||| || || ||||| Sbjct 7805 GAGCTGCTTTCCGGCGAAGATAAGACGCTGCTGGTCCGGAGGAATGCCCTCCTTATCTTG 7864 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 || ||| ||||||||| ||||||||||| || || || |||||||| | ||| | Sbjct 7865 GATCTTTGTCTTGACGTTGTCAATGGTGTCGGAGGACTCAACCTCAAGGGTGATGGTC-T 7923 Query 195111 TCCTGTCAAAGTTTTTACG 195129 | | |||| ||| || ||| Sbjct 7924 TGCAGTCAGAGTCTTGACG 7942 Score = 138 bits (152), Expect = 3e-27 Identities = 153/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||||||||||||||| || || || |||||||||| ||| || | ||||| || | ||| Sbjct 7523 GTGAAGAGTGGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCATCCTCCAACTG 7582 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || |||||||| | ||| ||||| || ||||||||||| || ||||| || || || Sbjct 7583 CTTGCCGGCGAAGATCAATCGCTGTTGATCCGGAGGAATGCCCTCCTTGTCCTGGATCTT 7642 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||| || || || || ||||| || || || ||||| || || | ||||| || || Sbjct 7643 GGTCTTTACATTGTCGATCGTGTCTGAGCTCTCGACTTCGAGAGTGATAGTCTTGCCGGT 7702 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 | || || ||||| | ||||| Sbjct 7703 GAGGGTCTTGACGAAGATCTGCAT 7726 Score = 129 bits (142), Expect = 1e-24 Identities = 156/211 (74%), Gaps = 1/211 (0%) Strand=Plus/Minus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGC-AAGAGTTCTCCCATCTT 194989 ||| | ||| | |||||||| || || || ||||| |||| ||| |||| || || | Sbjct 12088 AACCAAGTGCAATGTGGACTCCTTCTGGATGTTGTAGTCGGAGAAGGGTTCGGCCGTCCT 12029 Query 194990 CGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTT 195049 |||||||||| || ||||||||||| || || ||||| ||||| ||||| || ||||||| Sbjct 12028 CGAGCTGCTTTCCGGCGAAGATAAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCTT 11969 Query 195050 GAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCT 195109 | || || |||||| || || || ||||| || ||| ||||| || || | |||| Sbjct 11968 GGATCTTGGTCTTGACATTGTCGATCGTGTCTGATGATTCAACTTCGAGTGTGATGGTCT 11909 Query 195110 TTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | || || | || || ||||| | ||||| Sbjct 11908 TGCCGGTGAGGGTCTTGACGAAGATCTGCAT 11878 Score = 127 bits (140), Expect = 5e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| | |||||| || ||||| || || || |||||||| | |||||| | || || || Sbjct 12543 AACCAAGTGAAGCGTTGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCGTCCTC 12484 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 | |||||| || |||||||| || || || ||||| ||||||||||| || ||||| || Sbjct 12483 CAACTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTG 12424 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 || || ||| ||||| || || ||||| || |||||| || || || | ||||| Sbjct 12423 GATCTTCGTCTTCACGTTGTCGATAGTGTCTGATGATTCCACCTCGAGTGTGATGGTCTT 12364 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || ||||| | ||||| Sbjct 12363 GCCGGTGAGGGTCTTGACGAAGATCTGCAT 12334 Score = 123 bits (136), Expect = 6e-23 Identities = 154/210 (73%), Gaps = 1/210 (0%) Strand=Plus/Minus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 |||||||||||| |||||||| || || || ||||| |||| || || | || || || Sbjct 12315 AACAAGGTGAAGTGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTC 12256 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 | |||||| || |||||||| || || |||||||| || || || || || |||||||| Sbjct 12255 CAACTGCTTGCCGGCGAAGATGAGGCGCTGTTGGTCCGG-GGGATACCCTCCTTGTCTTG 12197 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 || || ||| ||||| || || ||||| || || |||||||| || | ||||| Sbjct 12196 GATCTTCGTCTTCACGTTGTCGATCGTGTCTGAGGACTCGACTTCAAGAGTGATTGTCTT 12137 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || ||||| | ||||| Sbjct 12136 GCCGGTGAGCGTCTTGACGAAGATCTGCAT 12107 >seq296 Length=257219 Score = 156 bits (172), Expect = 9e-33 Identities = 160/209 (77%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || ||||| |||||||| || ||||| |||| || |||| || |||||| Sbjct 193601 ACGAGGTGGAGGGTGGATTCTTTTTGGATGTTGTAGTCGGATAGCGTTCGGCCGTCTTCG 193542 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| || |||||||||||||| || ||||| || |||||||| Sbjct 193541 AGCTGCTTGCCGGCGAAGATGAGACGTTGTTGGTCTGGGGGGATGCCCTCCTTGTCTTGG 193482 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||||||||| ||||| ||||| || || || || ||||| | ||||| Sbjct 193481 ATCTTGGTCTTGACGTTGTCAATCGTGTCGGAGGACTCTACCTCGAGGGTGATGGTCTTG 193422 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| | || || || || | ||||| Sbjct 193421 CCTGTGAGTGTCTTGACAAAGATCTGCAT 193393 >seq312 Length=215048 Score = 143 bits (158), Expect = 6e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| ||||| ||||| || || || ||||| || | |||||| | || || ||| Sbjct 143696 ACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGGCCGTCCTCG 143637 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| ||||| |||||||| || || || ||||| ||||| || Sbjct 143636 AGCTGCTTGCCGGCGAAGATGAGTCGCTGTTGGTCCGGTGGGATACCTTCCTTGTCCTGG 143577 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 ||||| ||||||| || |||| ||| ||| ||||| || ||||| | ||||| Sbjct 143576 ATTTTGGTCTTGACGGCGTCGATGGAGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTA 143517 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || |||| || || ||||| | ||||| Sbjct 143516 CCCGTCAGGGTCTTGACGAAGATCTGCAT 143488 >seq359 Length=210429 Score = 123 bits (136), Expect = 6e-23 Identities = 143/193 (74%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||||||||||||||| || || || ||||| |||| ||||| | || || |||||||| Sbjct 42508 GTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGACCGTCCTCGAGCTG 42449 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || |||||||| || || |||||||| || || || ||||| ||||| || || || Sbjct 42448 CTTGCCGGCGAAGATGAGACGCTGTTGGTCCGGGGGGATACCTTCCTTGTCCTGGATCTT 42389 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||||||| || |||| ||| || || || || ||||| | |||||| || || Sbjct 42388 GGTCTTGACGGCGTCGATGGAGTCGGACGACTCGACCTCGAGGGTGATCGTCTTGCCGGT 42329 Query 195117 CAAAGTTTTTACG 195129 | || || ||| Sbjct 42328 GAGGGTCTTGACG 42316 >seq327 Length=173597 Score = 114 bits (126), Expect = 3e-20 Identities = 151/209 (72%), Gaps = 3/209 (1%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 |||||||| |||| ||||||| || || ||||| |||| || || | || || ||| Sbjct 94550 ACAAGGTGGAGAG---ACTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCG 94494 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 || ||||| || ||||||||||| || |||||||| ||||| ||||||| ||||| || Sbjct 94493 AGTTGCTTGCCGGCGAAGATAAGGCGCTGTTGGTCCGGAGGGGTGCCTTCCTTGTCCTGG 94434 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || || | |||| || || || || || || |||||||| || | | ||| Sbjct 94433 ATCTTGGTCTGGCCGTTGTCGATCGTATCTGATGAATCGACTTCAAGAGTGATGGCCTTG 94374 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || ||||| | ||||| Sbjct 94373 CCGGTGAGTGTCTTGACGAAGATCTGCAT 94345 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109476397224722