Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689995.1_202016-07-20] 366 sequences; 37,460,344 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq296 113 3e-20 seq2 109 4e-19 seq312 93.3 3e-14 >seq296 Length=257219 Score = 113 bits (124), Expect = 3e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 |||||| || ||||| ||||| || || |||| | || || ||||| || ||||| || Sbjct 193584 TTCTTTTTGGATGTTGTAGTCGGATAGCGTTCGGCCGTCTTCGAGCTGCTTGCCGGCGAA 193525 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || || ||||| |||||| | || | ||||||||||| ||||| |||||| Sbjct 193524 GATGAGACGTTGTTGGTCTGGGGGGATGCCCTCCTTGTCTTGGATCTTGGTCTTGACGTT 193465 Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969 | |||| || || ||| || |||| ||| ||||| || || ||||| ||||| || Sbjct 193464 GTCAATCGTGTCGGAGGACTCTACCTCGAGGGTGATGGTCTTGCCTGTGAGTGTCTTGAC 193405 Query 34970 AAAGATCTGCAT 34981 |||||||||||| Sbjct 193404 AAAGATCTGCAT 193393 >seq2 Length=120822 Score = 109 bits (120), Expect = 4e-19 Identities = 152/212 (72%), Gaps = 1/212 (0%) Strand=Plus/Minus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGA-AAGGCTTCGTTCATCAT 34830 ||||||||| | |||| || ||||| ||||| ||||| || |||| |||| | || | Sbjct 12088 AACCAAGTGCAATGTGGACTCCTTCTGGATGTTGTAGTCGGAGAAGGGTTCGGCCGTCCT 12029 Query 34831 CCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGC 34890 | ||||| |||||||| || || || || |||||||| | || | ||||||||||| Sbjct 12028 CGAGCTGCTTTCCGGCGAAGATAAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCTT 11969 Query 34891 TAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTT 34950 ||||| ||||| | |||| || | ||||| |||| || ||||| | Sbjct 11968 GGATCTTGGTCTTGACATTGTCGATCGTGTCTGATGATTCAACTTCGAGTGTGATGGTCT 11909 Query 34951 TTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 | || ||||| ||||| || |||||||||||| Sbjct 11908 TGCCGGTGAGGGTCTTGACGAAGATCTGCATA 11877 Score = 96.9 bits (106), Expect = 2e-15 Identities = 148/210 (70%), Gaps = 1/210 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 ||||| |||| ||| || || |||||||| |||||||||||| | || | || || Sbjct 6835 ACCAAATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCCGAAAGGGTGCGGCCGTCTTCG 6894 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || || || || || | |||||||||||| | || | ||||||||||| | Sbjct 6895 AGCTGCTTGCCCGCGAAGATCAATCGTTGCTGGTC-CGGGGGATGCCCTCCTTGTCCTGA 6953 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 |||||| ||||| | || | || | || || |||| || ||||| || Sbjct 6954 ATCTTCGTCTTGACATTGTCAATGGTGTCTGATGATTCCACCTCGAGTGTGATGGTCTTG 7013 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || ||||| ||||| || || ||||||||| Sbjct 7014 CCGGTGAGGGTCTTGACGAAAATCTGCATA 7043 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||||| ||| || ||||| ||||| || || |||||| | || |||| ||| Sbjct 7062 ACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCATCCTCC 7121 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 | ||| || ||||| || || | |||||| ||||| | || | ||||||||||| Sbjct 7122 AACTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGG 7181 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| || || | |||| || | ||| || || | || ||||| || Sbjct 7182 ATCTTGGTCTTTACATTGTCGATCGTGTCGGAGCTCTCCACCTCAAGAGTGATGGTCTTG 7241 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || ||||| ||||| || || ||||||||| Sbjct 7242 CCGGTGAGGGTCTTGACGAAAATCTGCATA 7271 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||||| ||| || ||||| ||||| || || |||||| | || |||| ||| Sbjct 7290 ACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCATCCTCC 7349 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 | ||| || ||||| || || | |||||| ||||| | || | ||||||||||| Sbjct 7350 AACTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGG 7409 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| || || | |||| || | ||| || || | || ||||| || Sbjct 7410 ATCTTGGTCTTTACATTGTCGATCGTGTCGGAGCTCTCCACCTCAAGAGTGATGGTCTTG 7469 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || ||||| ||||| || || ||||||||| Sbjct 7470 CCGGTGAGGGTCTTGACGAAAATCTGCATA 7499 Score = 89.7 bits (98), Expect = 3e-13 Identities = 147/211 (70%), Gaps = 1/211 (0%) Strand=Plus/Minus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 ||| | ||||| |||| || ||||| ||||| ||||| || ||| | || | || || Sbjct 12315 AACAAGGTGAAGTGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTC 12256 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 || ||| || ||||| || || || || || ||||| | || | ||||||||||| Sbjct 12255 CAACTGCTTGCCGGCGAAGATGAGGCGCTGTTGGTCCGGGGG-ATACCCTCCTTGTCTTG 12197 Query 34892 AATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTT 34951 |||||| || ||| | |||| || || ||| || || | || || || || Sbjct 12196 GATCTTCGTCTTCACGTTGTCGATCGTGTCTGAGGACTCGACTTCAAGAGTGATTGTCTT 12137 Query 34952 TCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || ||||| ||||| || |||||||||||| Sbjct 12136 GCCGGTGAGCGTCTTGACGAAGATCTGCATA 12106 Score = 87.8 bits (96), Expect = 1e-12 Identities = 146/211 (69%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 ||||||||||| || || ||||| ||||| || || ||||| | || | || || Sbjct 12543 AACCAAGTGAAGCGTTGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCGTCCTC 12484 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 || ||| || ||||| || || || || |||||||| | || | ||||||||||| Sbjct 12483 CAACTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTG 12424 Query 34892 AATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTT 34951 |||||| || ||| | || | || | || || |||| || ||||| || Sbjct 12423 GATCTTCGTCTTCACGTTGTCGATAGTGTCTGATGATTCCACCTCGAGTGTGATGGTCTT 12364 Query 34952 TCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || ||||| ||||| || |||||||||||| Sbjct 12363 GCCGGTGAGGGTCTTGACGAAGATCTGCATA 12333 Score = 86.0 bits (94), Expect = 4e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||||| ||| || ||||| ||||| || || |||||| | || |||| ||| Sbjct 7518 ACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCATCCTCC 7577 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 | ||| || ||||| || || | ||| || || || | || | ||||||||||| Sbjct 7578 AACTGCTTGCCGGCGAAGATCAATCGCTGTTGATCCGGAGGAATGCCCTCCTTGTCCTGG 7637 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| || || | |||| || | ||| || |||| || || || || Sbjct 7638 ATCTTGGTCTTTACATTGTCGATCGTGTCTGAGCTCTCGACTTCGAGAGTGATAGTCTTG 7697 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || ||||| ||||| || |||||||||||| Sbjct 7698 CCGGTGAGGGTCTTGACGAAGATCTGCATA 7727 >seq312 Length=215048 Score = 93.3 bits (102), Expect = 3e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||||||||| | || | || || ||||| || ||||| || Sbjct 143678 TCCTTCTGGATGTTGTAGTCCGAAAGAGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAG 143619 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || ||||| || ||||| | || | || |||||||| || || ||||||| Sbjct 143618 ATGAGTCGCTGTTGGTCCGGTGGGATACCTTCCTTGTCCTGGATTTTGGTCTTGACGGCG 143559 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || || || | ||| || |||| ||| || || || ||||| || ||||| || Sbjct 143558 TCGATGGAGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTACCCGTCAGGGTCTTGACG 143499 Query 34971 AAGATCTGCAT 34981 ||||||||||| Sbjct 143498 AAGATCTGCAT 143488 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324632151931248